RNA–Protein interactions for RNA: ENST00000436321.5

MDH1-206, Transcript of malate dehydrogenase 1, humanhuman

TSL 3

Gene MDH1, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-206ENST00000436321 AEBP2Q6ZN18 517 aaPredicted RBP20.07■□□□□ 0.8
MDH1-206ENST00000436321 CHIC1Q5VXU3 224 aa19.8■□□□□ 0.76
MDH1-206ENST00000436321 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
MDH1-206ENST00000436321 SENP3Q9H4L4 574 aaPredicted RBP17.11■□□□□ 0.33
MDH1-206ENST00000436321 PLPPR3Q6T4P5 718 aa16.19■□□□□ 0.18
MDH1-206ENST00000436321 NISCHQ9Y2I1 1504 aa15.92■□□□□ 0.14
MDH1-206ENST00000436321 FOXD1Q16676 465 aa15.81■□□□□ 0.12
MDH1-206ENST00000436321 ADRA2BP18089 450 aa15.33■□□□□ 0.04
MDH1-206ENST00000436321 PPP6R1Q9UPN7 881 aa15.29■□□□□ 0.04
MDH1-206ENST00000436321 EHMT2Q96KQ7 1210 aa15.21■□□□□ 0.03
MDH1-206ENST00000436321 PIAS4Q8N2W9 510 aaPredicted RBP15.02■□□□□ -0
MDH1-206ENST00000436321 KCNA4P22459 653 aa14.98□□□□□ -0.01
MDH1-206ENST00000436321 MSH5O43196 834 aa14.59□□□□□ -0.07
MDH1-206ENST00000436321 SLC4A1APQ9BWU0 796 aaKnown RBP14.5□□□□□ -0.09
MDH1-206ENST00000436321 CSRNP3Q8WYN3 585 aa14.49□□□□□ -0.09
MDH1-206ENST00000436321 PPP4R3CPQ6ZMV5 832 aa14.27□□□□□ -0.13
MDH1-206ENST00000436321 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
MDH1-206ENST00000436321 SCAF1Q9H7N4 1312 aaKnown RBP14.12□□□□□ -0.15
MDH1-206ENST00000436321 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
MDH1-206ENST00000436321 SLC24A1O60721 1099 aa13.91□□□□□ -0.18
MDH1-206ENST00000436321 MAPK8IP2Q13387 824 aaPredicted RBP13.85□□□□□ -0.19
MDH1-206ENST00000436321 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
MDH1-206ENST00000436321 CCDC180Q9P1Z9 1646 aa13.78□□□□□ -0.2
MDH1-206ENST00000436321 ZBTB22O15209 634 aa13.75□□□□□ -0.21
MDH1-206ENST00000436321 AMER1Q5JTC6 1135 aaPredicted RBP13.66□□□□□ -0.22
MDH1-206ENST00000436321 DMRT2Q9Y5R5 561 aa13.64□□□□□ -0.23
MDH1-206ENST00000436321 RTN4Q9NQC3 1192 aaKnown RBP13.6□□□□□ -0.23
MDH1-206ENST00000436321 FOXD4L1Q9NU39 408 aa13.54□□□□□ -0.24
MDH1-206ENST00000436321 RNF216Q9NWF9 866 aaPredicted RBP13.52□□□□□ -0.25
MDH1-206ENST00000436321 ZCCHC6Q5VYS8 1495 aaKnown RBP13.41□□□□□ -0.26
MDH1-206ENST00000436321 HOXD11P31277 338 aaPredicted RBP13.39□□□□□ -0.27
MDH1-206ENST00000436321 DNAJC5BQ9UF47 199 aa13.3□□□□□ -0.28
MDH1-206ENST00000436321 DCAF8L1A6NGE4 600 aa13.18□□□□□ -0.3
MDH1-206ENST00000436321 DCAF8L2P0C7V8 631 aa13.17□□□□□ -0.3
MDH1-206ENST00000436321 SHROOM4Q9ULL8 1493 aa13.16□□□□□ -0.3
MDH1-206ENST00000436321 DCAF1Q9Y4B6 1507 aa13.14□□□□□ -0.31
MDH1-206ENST00000436321 FKBP8Q14318 412 aa13.12□□□□□ -0.31
MDH1-206ENST00000436321 ATXN8OSP0DMR3 200 aa12.99□□□□□ -0.33
MDH1-206ENST00000436321 POTEDQ86YR6 584 aa12.99□□□□□ -0.33
MDH1-206ENST00000436321 ABCC9O60706 1549 aa12.94□□□□□ -0.34
MDH1-206ENST00000436321 MYO15BQ96JP2 1530 aa12.93□□□□□ -0.34
MDH1-206ENST00000436321 MYCNP04198 464 aaPredicted RBP12.88□□□□□ -0.35
MDH1-206ENST00000436321 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.88□□□□□ -0.352e-10■■□□□ 11.9
MDH1-206ENST00000436321 SLC4A2P04920 1241 aa12.87□□□□□ -0.35
MDH1-206ENST00000436321 NACADO15069 1562 aa12.82□□□□□ -0.36
MDH1-206ENST00000436321 SUPT5HO00267 1087 aaKnown RBP12.74□□□□□ -0.37
MDH1-206ENST00000436321 SCRIBQ14160 1630 aa12.73□□□□□ -0.37
MDH1-206ENST00000436321 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
MDH1-206ENST00000436321 U3KPZ7 1027 aaPredicted RBP12.59□□□□□ -0.39
MDH1-206ENST00000436321 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.58□□□□□ -0.4
MDH1-206ENST00000436321 HNRNPUL2Q1KMD3 747 aaKnown RBP12.58□□□□□ -0.4
MDH1-206ENST00000436321 PLCB2Q00722 1185 aa12.54□□□□□ -0.4
MDH1-206ENST00000436321 SAMD1Q6SPF0 538 aaPredicted RBP12.52□□□□□ -0.41
MDH1-206ENST00000436321 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
MDH1-206ENST00000436321 APLP2Q06481 763 aa12.44□□□□□ -0.42
MDH1-206ENST00000436321 FBXO3Q9UK99 471 aa12.44□□□□□ -0.42
MDH1-206ENST00000436321 HAP1P54257 671 aaPredicted RBP12.42□□□□□ -0.42
MDH1-206ENST00000436321 RSF1Q96T23 1441 aaPredicted RBP12.42□□□□□ -0.42
MDH1-206ENST00000436321 BCANQ96GW7 911 aa12.39□□□□□ -0.43
MDH1-206ENST00000436321 ATF5Q9Y2D1 282 aaPredicted RBP12.39□□□□□ -0.43
MDH1-206ENST00000436321 C1QBPQ07021 282 aaKnown RBP12.36□□□□□ -0.43
MDH1-206ENST00000436321 CECR2Q9BXF3 1484 aa12.35□□□□□ -0.43
MDH1-206ENST00000436321 UNC13AQ9UPW8 1703 aa12.33□□□□□ -0.44
MDH1-206ENST00000436321 MROH2BQ7Z745 1585 aa12.3□□□□□ -0.44
MDH1-206ENST00000436321 BAZ1AQ9NRL2 1556 aaPredicted RBP12.28□□□□□ -0.44
MDH1-206ENST00000436321 BICRAQ9NZM4 1560 aa12.26□□□□□ -0.45
MDH1-206ENST00000436321 PABPN1Q86U42 306 aaKnown RBP eCLIP12.25□□□□□ -0.45
MDH1-206ENST00000436321 CAPN15O75808 1086 aa12.24□□□□□ -0.45
MDH1-206ENST00000436321 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
MDH1-206ENST00000436321 VSIG10Q8N0Z9 540 aa12.22□□□□□ -0.45
MDH1-206ENST00000436321 TAOK2Q9UL54 1235 aa12.22□□□□□ -0.45
MDH1-206ENST00000436321 TRHP20396 242 aaPredicted RBP12.21□□□□□ -0.45
MDH1-206ENST00000436321 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.45
MDH1-206ENST00000436321 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
MDH1-206ENST00000436321 SPDYE4A6NLX3 237 aa12.19□□□□□ -0.46
MDH1-206ENST00000436321 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
MDH1-206ENST00000436321 WIZO95785 1651 aa12.19□□□□□ -0.46
MDH1-206ENST00000436321 VASPP50552 380 aaPredicted RBP12.18□□□□□ -0.46
MDH1-206ENST00000436321 CACNB1Q02641 598 aaPredicted RBP12.12□□□□□ -0.47
MDH1-206ENST00000436321 TOP2AP11388 1531 aaKnown RBP12.11□□□□□ -0.47
MDH1-206ENST00000436321 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.06□□□□□ -0.48
MDH1-206ENST00000436321 IFNLR1Q8IU57 520 aaPredicted RBP12.05□□□□□ -0.48
MDH1-206ENST00000436321 TPRNQ4KMQ1 711 aa12.04□□□□□ -0.48
MDH1-206ENST00000436321 PROM2Q8N271 834 aa12.02□□□□□ -0.49
MDH1-206ENST00000436321 PEG3Q9GZU2 1588 aa12.01□□□□□ -0.49
MDH1-206ENST00000436321 POLA2Q14181 598 aa12.01□□□□□ -0.49
MDH1-206ENST00000436321 PKD2Q13563 968 aa12□□□□□ -0.49
MDH1-206ENST00000436321 ABCB7O75027 752 aa11.99□□□□□ -0.49
MDH1-206ENST00000436321 SMARCA2P51531 1590 aa11.98□□□□□ -0.49
MDH1-206ENST00000436321 CCDC88BA6NC98 1476 aa11.98□□□□□ -0.49
MDH1-206ENST00000436321 ATAD2BQ9ULI0 1458 aa11.97□□□□□ -0.49
MDH1-206ENST00000436321 TRIM41Q8WV44 630 aa11.97□□□□□ -0.49
MDH1-206ENST00000436321 BBXQ8WY36 941 aaPredicted RBP11.96□□□□□ -0.49
MDH1-206ENST00000436321 FBLN2P98095 1184 aa11.95□□□□□ -0.5
MDH1-206ENST00000436321 BAZ1BQ9UIG0 1483 aaKnown RBP11.94□□□□□ -0.5
MDH1-206ENST00000436321 EIF4G1Q04637 1599 aaKnown RBP11.92□□□□□ -0.5
MDH1-206ENST00000436321 PAXIP1Q6ZW49 1069 aaPredicted RBP11.92□□□□□ -0.5
MDH1-206ENST00000436321 KDM2AQ9Y2K7 1162 aa11.92□□□□□ -0.5
MDH1-206ENST00000436321 DSG3P32926 999 aa11.91□□□□□ -0.5
MDH1-206ENST00000436321 MKRN4PQ13434 485 aaPredicted RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms