RNA–Protein interactions for RNA: ENST00000473614.1

FN1-218, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-218ENST00000473614 AEBP2Q6ZN18 517 aaPredicted RBP17.87■□□□□ 0.45
FN1-218ENST00000473614 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
FN1-218ENST00000473614 NISCHQ9Y2I1 1504 aa16.39■□□□□ 0.21
FN1-218ENST00000473614 PHF23Q9BUL5 403 aaPredicted RBP15.6■□□□□ 0.09
FN1-218ENST00000473614 SENP3Q9H4L4 574 aaPredicted RBP15.2■□□□□ 0.02
FN1-218ENST00000473614 PLPPR3Q6T4P5 718 aa14.56□□□□□ -0.08
FN1-218ENST00000473614 CCDC180Q9P1Z9 1646 aa14.37□□□□□ -0.11
FN1-218ENST00000473614 FOXD1Q16676 465 aa14.04□□□□□ -0.16
FN1-218ENST00000473614 ZCCHC6Q5VYS8 1495 aaKnown RBP13.77□□□□□ -0.21
FN1-218ENST00000473614 ADRA2BP18089 450 aa13.7□□□□□ -0.22
FN1-218ENST00000473614 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
FN1-218ENST00000473614 DCAF1Q9Y4B6 1507 aa13.64□□□□□ -0.23
FN1-218ENST00000473614 MYO15BQ96JP2 1530 aa13.5□□□□□ -0.25
FN1-218ENST00000473614 ABCC9O60706 1549 aa13.43□□□□□ -0.26
FN1-218ENST00000473614 NACADO15069 1562 aa13.36□□□□□ -0.27
FN1-218ENST00000473614 PIAS4Q8N2W9 510 aaPredicted RBP13.31□□□□□ -0.28
FN1-218ENST00000473614 DCAF8L2P0C7V8 631 aa13.29□□□□□ -0.28
FN1-218ENST00000473614 RB1CC1Q8TDY2 1594 aa13.21□□□□□ -0.29
FN1-218ENST00000473614 SHROOM4Q9ULL8 1493 aa13.14□□□□□ -0.31
FN1-218ENST00000473614 SCRIBQ14160 1630 aa13.06□□□□□ -0.32
FN1-218ENST00000473614 UNC13AQ9UPW8 1703 aa12.99□□□□□ -0.33
FN1-218ENST00000473614 MSH5O43196 834 aa12.91□□□□□ -0.34
FN1-218ENST00000473614 PPP4R3CPQ6ZMV5 832 aa12.84□□□□□ -0.35
FN1-218ENST00000473614 POTEDQ86YR6 584 aa12.84□□□□□ -0.35
FN1-218ENST00000473614 BICRAQ9NZM4 1560 aa12.84□□□□□ -0.35
FN1-218ENST00000473614 KCNA4P22459 653 aa12.78□□□□□ -0.36
FN1-218ENST00000473614 CECR2Q9BXF3 1484 aa12.68□□□□□ -0.38
FN1-218ENST00000473614 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
FN1-218ENST00000473614 BAZ1AQ9NRL2 1556 aaPredicted RBP12.65□□□□□ -0.38
FN1-218ENST00000473614 SCAF1Q9H7N4 1312 aaKnown RBP12.64□□□□□ -0.39
FN1-218ENST00000473614 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
FN1-218ENST00000473614 SUPT5HO00267 1087 aaKnown RBP12.63□□□□□ -0.39
FN1-218ENST00000473614 MROH2BQ7Z745 1585 aa12.62□□□□□ -0.39
FN1-218ENST00000473614 PABPN1Q86U42 306 aaKnown RBP eCLIP12.61□□□□□ -0.39
FN1-218ENST00000473614 SMARCA4P51532 1647 aa12.6□□□□□ -0.39
FN1-218ENST00000473614 PEG3Q9GZU2 1588 aa12.52□□□□□ -0.4
FN1-218ENST00000473614 WIZO95785 1651 aa12.51□□□□□ -0.41
FN1-218ENST00000473614 CNKSR2Q8WXI2 1034 aa12.45□□□□□ -0.42
FN1-218ENST00000473614 EIF4G1Q04637 1599 aaKnown RBP12.42□□□□□ -0.42
FN1-218ENST00000473614 TOP2AP11388 1531 aaKnown RBP12.42□□□□□ -0.42
FN1-218ENST00000473614 SMARCA2P51531 1590 aa12.39□□□□□ -0.43
FN1-218ENST00000473614 ATAD2BQ9ULI0 1458 aa12.38□□□□□ -0.43
FN1-218ENST00000473614 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
FN1-218ENST00000473614 MAPK8IP2Q13387 824 aaPredicted RBP12.36□□□□□ -0.43
FN1-218ENST00000473614 NCAPD3P42695 1498 aa12.32□□□□□ -0.44
FN1-218ENST00000473614 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
FN1-218ENST00000473614 BAZ1BQ9UIG0 1483 aaKnown RBP12.27□□□□□ -0.44
FN1-218ENST00000473614 CCDC88BA6NC98 1476 aa12.26□□□□□ -0.45
FN1-218ENST00000473614 SLC4A1APQ9BWU0 796 aaKnown RBP12.25□□□□□ -0.45
FN1-218ENST00000473614 CC2D2AQ9P2K1 1620 aa12.22□□□□□ -0.45
FN1-218ENST00000473614 DMRT2Q9Y5R5 561 aa12.16□□□□□ -0.46
FN1-218ENST00000473614 EHMT2Q96KQ7 1210 aa12.15□□□□□ -0.46
FN1-218ENST00000473614 RNF216Q9NWF9 866 aaPredicted RBP12.14□□□□□ -0.47
FN1-218ENST00000473614 PRDM2Q13029 1718 aa12.03□□□□□ -0.48
FN1-218ENST00000473614 CFTRP13569 1480 aa12.02□□□□□ -0.48
FN1-218ENST00000473614 DNAJC5BQ9UF47 199 aa12.01□□□□□ -0.49
FN1-218ENST00000473614 HOXD11P31277 338 aaPredicted RBP12□□□□□ -0.49
FN1-218ENST00000473614 CADPSQ9ULU8 1353 aa11.95□□□□□ -0.5
FN1-218ENST00000473614 ABCC8Q09428 1581 aa11.95□□□□□ -0.5
FN1-218ENST00000473614 TRIM41Q8WV44 630 aa11.94□□□□□ -0.5
FN1-218ENST00000473614 WRNQ14191 1432 aaPredicted RBP eCLIP11.91□□□□□ -0.5
FN1-218ENST00000473614 CSRNP3Q8WYN3 585 aa11.9□□□□□ -0.5
FN1-218ENST00000473614 LAMC3Q9Y6N6 1575 aa11.9□□□□□ -0.5
FN1-218ENST00000473614 BIVM-ERCC5R4GMW8 1640 aa11.88□□□□□ -0.51
FN1-218ENST00000473614 SYNJ1O43426 1573 aa11.88□□□□□ -0.51
FN1-218ENST00000473614 TOP2BQ02880 1626 aa11.87□□□□□ -0.51
FN1-218ENST00000473614 CUX1P39880 1505 aa11.81□□□□□ -0.52
FN1-218ENST00000473614 NESP48681 1621 aa11.8□□□□□ -0.52
FN1-218ENST00000473614 FANCD2Q9BXW9 1451 aa11.8□□□□□ -0.52
FN1-218ENST00000473614 EEA1Q15075 1411 aa11.77□□□□□ -0.52
FN1-218ENST00000473614 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
FN1-218ENST00000473614 DNMBPQ6XZF7 1577 aa11.74□□□□□ -0.53
FN1-218ENST00000473614 CEP164Q9UPV0 1460 aa11.73□□□□□ -0.53
FN1-218ENST00000473614 KIF21AQ7Z4S6 1674 aa11.72□□□□□ -0.53
FN1-218ENST00000473614 SOGA1O94964 1423 aa11.72□□□□□ -0.53
FN1-218ENST00000473614 FOXD4L1Q9NU39 408 aa11.72□□□□□ -0.53
FN1-218ENST00000473614 ZBTB22O15209 634 aa11.71□□□□□ -0.53
FN1-218ENST00000473614 TOPBP1Q92547 1522 aa11.69□□□□□ -0.54
FN1-218ENST00000473614 RUSC2Q8N2Y8 1516 aa11.68□□□□□ -0.54
FN1-218ENST00000473614 URB2Q14146 1524 aaKnown RBP11.67□□□□□ -0.54
FN1-218ENST00000473614 FGD5Q6ZNL6 1462 aa11.66□□□□□ -0.54
FN1-218ENST00000473614 LOC105371045A0A1W2PR82 267 aa11.65□□□□□ -0.54
FN1-218ENST00000473614 DCAF8L1A6NGE4 600 aa11.64□□□□□ -0.55
FN1-218ENST00000473614 KIF21BO75037 1637 aa11.64□□□□□ -0.55
FN1-218ENST00000473614 FAM9AQ8IZU1 332 aaPredicted RBP11.63□□□□□ -0.55
FN1-218ENST00000473614 POLA1P09884 1462 aaPredicted RBP11.63□□□□□ -0.55
FN1-218ENST00000473614 MRC2Q9UBG0 1479 aa11.62□□□□□ -0.55
FN1-218ENST00000473614 ABCA10Q8WWZ4 1543 aa11.61□□□□□ -0.55
FN1-218ENST00000473614 KIF27Q86VH2 1401 aa11.6□□□□□ -0.55
FN1-218ENST00000473614 WDR97A6NE52 1622 aa11.6□□□□□ -0.55
FN1-218ENST00000473614 SLC4A2P04920 1241 aa11.6□□□□□ -0.55
FN1-218ENST00000473614 WDR62O43379 1518 aa11.59□□□□□ -0.55
FN1-218ENST00000473614 PRXQ9BXM0 1461 aa11.57□□□□□ -0.56
FN1-218ENST00000473614 ERICH3Q5RHP9 1530 aa11.56□□□□□ -0.56
FN1-218ENST00000473614 THOC2Q8NI27 1593 aaKnown RBP11.56□□□□□ -0.56
FN1-218ENST00000473614 TARBP1Q13395 1621 aaKnown RBP11.56□□□□□ -0.56
FN1-218ENST00000473614 CUX2O14529 1486 aa11.56□□□□□ -0.56
FN1-218ENST00000473614 GOLGA3Q08378 1498 aa11.56□□□□□ -0.56
FN1-218ENST00000473614 TNIKQ9UKE5 1360 aa11.54□□□□□ -0.56
FN1-218ENST00000473614 RAD54L2Q9Y4B4 1467 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms