Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 RPLP0-210ENST00000547475 792 ntTSL 310.19□□□□□ -0.786e-7■■□□□ 13.7
SMNDC1O75940 LARP4-205ENST00000517559 559 ntTSL 410.17□□□□□ -0.786e-7■■□□□ 13.7
SMNDC1O75940 TOP1MT-211ENST00000520950 564 ntTSL 410.13□□□□□ -0.796e-7■■□□□ 13.7
SMNDC1O75940 PPP4R1-218ENST00000580745 535 ntTSL 410.04□□□□□ -0.86e-7■■□□□ 13.7
SMNDC1O75940 SYVN1-205ENST00000525874 475 ntTSL 310.02□□□□□ -0.816e-7■■□□□ 13.7
SMNDC1O75940 RPLP0-214ENST00000549098 1106 ntTSL 29.87□□□□□ -0.836e-7■■□□□ 13.7
SMNDC1O75940 PPP4R1-208ENST00000578178 468 ntTSL 49.81□□□□□ -0.846e-7■■□□□ 13.7
SMNDC1O75940 TOP1MT-214ENST00000522041 906 ntTSL 39.81□□□□□ -0.846e-7■■□□□ 13.7
SMNDC1O75940 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC9.65□□□□□ -0.866e-7■■□□□ 13.7
SMNDC1O75940 SYVN1-208ENST00000527142 796 ntTSL 59.63□□□□□ -0.876e-7■■□□□ 13.7
SMNDC1O75940 RPLP0-224ENST00000551914 402 ntTSL 39.48□□□□□ -0.896e-7■■□□□ 13.7
SMNDC1O75940 LGALS8-205ENST00000366583 1547 ntTSL 39.46□□□□□ -0.899e-13■■□□□ 13.7
SMNDC1O75940 LGALS8-207ENST00000406509 1035 ntTSL 59.45□□□□□ -0.99e-13■■□□□ 13.7
SMNDC1O75940 TOP1MT-204ENST00000518007 509 ntTSL 59.45□□□□□ -0.96e-7■■□□□ 13.7
SMNDC1O75940 LGALS8-223ENST00000528259 1045 ntTSL 59.33□□□□□ -0.929e-13■■□□□ 13.7
SMNDC1O75940 PPP4R1-224ENST00000583092 554 ntTSL 49.32□□□□□ -0.926e-7■■□□□ 13.7
SMNDC1O75940 RPLP0-202ENST00000313104 912 ntTSL 1 (best) BASIC9.27□□□□□ -0.936e-7■■□□□ 13.7
SMNDC1O75940 RPLP0-221ENST00000551258 966 ntTSL 59.27□□□□□ -0.936e-7■■□□□ 13.7
SMNDC1O75940 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC9.2□□□□□ -0.949e-13■■□□□ 13.7
SMNDC1O75940 PPP4R1-220ENST00000581835 379 ntTSL 29.19□□□□□ -0.946e-7■■□□□ 13.7
SMNDC1O75940 PPP4R1-201ENST00000285124 2917 ntTSL 59.1□□□□□ -0.956e-7■■□□□ 13.7
SMNDC1O75940 RPLP0-212ENST00000548551 543 ntTSL 29.1□□□□□ -0.956e-7■■□□□ 13.7
SMNDC1O75940 RPLP0-208ENST00000547191 680 ntTSL 59.04□□□□□ -0.966e-7■■□□□ 13.7
SMNDC1O75940 RPLP0-213ENST00000548568 1127 ntTSL 1 (best)9.03□□□□□ -0.966e-7■■□□□ 13.7
SMNDC1O75940 RPLP0-207ENST00000547173 864 ntTSL 38.97□□□□□ -0.976e-7■■□□□ 13.7
SMNDC1O75940 LGALS8-221ENST00000526652 534 ntTSL 48.65□□□□□ -1.029e-13■■□□□ 13.7
SMNDC1O75940 SYVN1-214ENST00000532771 709 ntTSL 38.58□□□□□ -1.046e-7■■□□□ 13.7
SMNDC1O75940 LGALS8-202ENST00000323938 1855 ntTSL 5 BASIC8.52□□□□□ -1.059e-13■■□□□ 13.7
SMNDC1O75940 RPLP0-211ENST00000548495 651 ntTSL 38.51□□□□□ -1.056e-7■■□□□ 13.7
SMNDC1O75940 SYVN1-211ENST00000529207 811 ntTSL 58.39□□□□□ -1.076e-7■■□□□ 13.7
SMNDC1O75940 LGALS8-211ENST00000442397 564 ntTSL 48.24□□□□□ -1.099e-13■■□□□ 13.7
SMNDC1O75940 LARP4-218ENST00000552445 722 ntTSL 38.18□□□□□ -1.16e-7■■□□□ 13.7
SMNDC1O75940 SYVN1-213ENST00000531018 826 ntTSL 38.16□□□□□ -1.16e-7■■□□□ 13.7
SMNDC1O75940 FDFT1-213ENST00000528729 570 ntTSL 37.99□□□□□ -1.136e-7■■□□□ 13.7
SMNDC1O75940 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC7.94□□□□□ -1.146e-7■■□□□ 13.7
SMNDC1O75940 FDFT1-208ENST00000525777 1472 ntTSL 2 BASIC7.79□□□□□ -1.166e-7■■□□□ 13.7
SMNDC1O75940 PPP4R1-214ENST00000579638 566 ntTSL 47.5□□□□□ -1.216e-7■■□□□ 13.7
SMNDC1O75940 PPP4R1-211ENST00000578875 580 ntTSL 47.23□□□□□ -1.256e-7■■□□□ 13.7
SMNDC1O75940 PPP4R1-212ENST00000579415 563 ntTSL 47.22□□□□□ -1.256e-7■■□□□ 13.7
SMNDC1O75940 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.269e-13■■□□□ 13.7
SMNDC1O75940 DHX15-202ENST00000503562 727 ntTSL 27.07□□□□□ -1.284e-9■■□□□ 13.7
SMNDC1O75940 LGALS8-224ENST00000528782 572 ntTSL 46.8□□□□□ -1.329e-13■■□□□ 13.7
SMNDC1O75940 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC6.67□□□□□ -1.346e-7■■□□□ 13.7
SMNDC1O75940 LGALS8-227ENST00000532640 514 ntTSL 46.55□□□□□ -1.369e-13■■□□□ 13.7
SMNDC1O75940 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.48□□□□□ -1.379e-13■■□□□ 13.7
SMNDC1O75940 PPP4R1-223ENST00000582933 579 ntTSL 46.42□□□□□ -1.386e-7■■□□□ 13.7
SMNDC1O75940 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.27□□□□□ -1.419e-13■■□□□ 13.7
SMNDC1O75940 PPP4R1-226ENST00000583903 549 ntTSL 46.26□□□□□ -1.416e-7■■□□□ 13.7
SMNDC1O75940 PPP4R1-217ENST00000580583 743 ntTSL 56.06□□□□□ -1.446e-7■■□□□ 13.7
SMNDC1O75940 LARP4-215ENST00000550260 583 ntTSL 35.98□□□□□ -1.456e-7■■□□□ 13.7
SMNDC1O75940 LARP4-216ENST00000550522 567 ntTSL 45.81□□□□□ -1.486e-7■■□□□ 13.7
SMNDC1O75940 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.536e-7■■□□□ 13.7
SMNDC1O75940 PWWP2A-203ENST00000520662 407 ntTSL 35.24□□□□□ -1.576e-7■■□□□ 13.7
SMNDC1O75940 LARP4-202ENST00000347328 3621 ntTSL 1 (best) BASIC5.22□□□□□ -1.576e-7■■□□□ 13.7
SMNDC1O75940 FDFT1-216ENST00000529521 418 ntTSL 23.05□□□□□ -1.926e-7■■□□□ 13.7
SMNDC1O75940 MCM3-202ENST00000419835 2523 ntTSL 2 BASIC13.4□□□□□ -0.262e-6■■□□□ 13.7
SMNDC1O75940 MCM3-201ENST00000229854 3083 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.62e-6■■□□□ 13.7
SMNDC1O75940 MCM3-207ENST00000616552 3208 ntTSL 1 (best) BASIC10.24□□□□□ -0.772e-6■■□□□ 13.7
SMNDC1O75940 MCM3-205ENST00000596288 3169 ntTSL 1 (best) BASIC9.4□□□□□ -0.912e-6■■□□□ 13.7
SMNDC1O75940 MCM3-203ENST00000421471 1030 ntTSL 58.88□□□□□ -0.992e-6■■□□□ 13.7
SMNDC1O75940 RPSA-207ENST00000478027 1227 ntTSL 210.28□□□□□ -0.763e-23■■□□□ 13.7
SMNDC1O75940 RPSA-204ENST00000458478 874 ntTSL 210.17□□□□□ -0.783e-23■■□□□ 13.7
SMNDC1O75940 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.923e-23■■□□□ 13.7
SMNDC1O75940 RPSA-202ENST00000443003 1032 ntAPPRIS ALT1 TSL 1 (best) BASIC6.79□□□□□ -1.323e-23■■□□□ 13.7
SMNDC1O75940 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.143e-6■■□□□ 13.6
SMNDC1O75940 MED15-211ENST00000433831 3267 ntTSL 515.2■□□□□ 0.023e-6■■□□□ 13.6
SMNDC1O75940 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC14.84□□□□□ -0.033e-6■■□□□ 13.6
SMNDC1O75940 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.84□□□□□ -0.193e-6■■□□□ 13.6
SMNDC1O75940 MED15-201ENST00000263205 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.253e-6■■□□□ 13.6
SMNDC1O75940 MED15-230ENST00000492381 3619 ntTSL 211.14□□□□□ -0.633e-6■■□□□ 13.6
SMNDC1O75940 KIAA0907-207ENST00000478002 1065 ntTSL 56.39□□□□□ -1.392e-75■■□□□ 13.6
SMNDC1O75940 SNORA80E-201ENST00000384744 137 ntBASIC2.98□□□□□ -1.932e-75■■□□□ 13.6
SMNDC1O75940 CIRBP-223ENST00000589266 616 ntTSL 322.02■■□□□ 1.122e-6■■□□□ 13.6
SMNDC1O75940 CIRBP-219ENST00000588411 619 ntTSL 519.64■□□□□ 0.732e-6■■□□□ 13.6
SMNDC1O75940 PSRC1-208ENST00000429031 835 ntTSL 319.3■□□□□ 0.684e-7■■□□□ 13.6
SMNDC1O75940 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.581e-6■■□□□ 13.6
SMNDC1O75940 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.454e-7■■□□□ 13.6
SMNDC1O75940 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.454e-7■■□□□ 13.6
SMNDC1O75940 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.394e-7■■□□□ 13.6
SMNDC1O75940 PSRC1-212ENST00000492431 1870 ntTSL 1 (best)17.5■□□□□ 0.394e-7■■□□□ 13.6
SMNDC1O75940 TSSC2-206ENST00000533775 1210 ntTSL 517.49■□□□□ 0.393e-9■■□□□ 13.6
SMNDC1O75940 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.28■□□□□ 0.364e-7■■□□□ 13.6
SMNDC1O75940 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.19■□□□□ 0.343e-9■■□□□ 13.6
SMNDC1O75940 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.284e-7■■□□□ 13.6
SMNDC1O75940 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.274e-7■■□□□ 13.6
SMNDC1O75940 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.161e-6■■□□□ 13.6
SMNDC1O75940 CCNF-201ENST00000293968 4173 ntTSL 1 (best)15.57■□□□□ 0.081e-6■■□□□ 13.6
SMNDC1O75940 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.081e-6■■□□□ 13.6
SMNDC1O75940 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC14.96□□□□□ -0.011e-6■■□□□ 13.6
SMNDC1O75940 TSSC2-202ENST00000526284 1244 ntTSL 1 (best)14.27□□□□□ -0.133e-9■■□□□ 13.6
SMNDC1O75940 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC13.19□□□□□ -0.31e-6■■□□□ 13.6
SMNDC1O75940 TSSC2-203ENST00000526488 674 ntTSL 310.88□□□□□ -0.673e-9■■□□□ 13.6
SMNDC1O75940 PCSK7-214ENST00000534529 5393 ntTSL 510.71□□□□□ -0.691e-6■■□□□ 13.6
SMNDC1O75940 TAF1-201ENST00000276072 5692 ntAPPRIS P3 TSL 5 BASIC8.73□□□□□ -1.011e-6■■□□□ 13.6
SMNDC1O75940 PPP1R10-205ENST00000476704 559 ntTSL 38.55□□□□□ -1.041e-6■■□□□ 13.6
SMNDC1O75940 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC8.08□□□□□ -1.121e-6■■□□□ 13.6
SMNDC1O75940 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC7.94□□□□□ -1.141e-6■■□□□ 13.6
SMNDC1O75940 UBAP2-212ENST00000629575 3460 ntTSL 28.16□□□□□ -1.15e-21■■□□□ 13.6
SMNDC1O75940 UBAP2-201ENST00000360802 4284 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.175e-21■■□□□ 13.6
SMNDC1O75940 UBAP2-204ENST00000379238 4289 ntAPPRIS P1 TSL 5 BASIC7.77□□□□□ -1.175e-21■■□□□ 13.6
Retrieved 100 of 11,362 protein–RNA pairs in 135.7 ms