RNA–Protein interactions for RNA: ENST00000552445.1

LARP4-218, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 3

Gene LARP4, Length 722 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-218ENST00000552445 AEBP2Q6ZN18 517 aaPredicted RBP19.31■□□□□ 0.68
LARP4-218ENST00000552445 CHIC1Q5VXU3 224 aa18.41■□□□□ 0.54
LARP4-218ENST00000552445 NISCHQ9Y2I1 1504 aa17.37■□□□□ 0.37
LARP4-218ENST00000552445 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
LARP4-218ENST00000552445 ABCC9O60706 1549 aa16.44■□□□□ 0.22
LARP4-218ENST00000552445 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
LARP4-218ENST00000552445 DNAJC5BQ9UF47 199 aa15.99■□□□□ 0.15
LARP4-218ENST00000552445 CCDC180Q9P1Z9 1646 aa15.83■□□□□ 0.13
LARP4-218ENST00000552445 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
LARP4-218ENST00000552445 FOXD1Q16676 465 aa15.41■□□□□ 0.06
LARP4-218ENST00000552445 DNAJC5Q9H3Z4 198 aa15.23■□□□□ 0.03
LARP4-218ENST00000552445 PABPN1Q86U42 306 aaKnown RBP eCLIP15.21■□□□□ 0.03
LARP4-218ENST00000552445 NACADO15069 1562 aa15.17■□□□□ 0.02
LARP4-218ENST00000552445 BICRAQ9NZM4 1560 aa14.94□□□□□ -0.02
LARP4-218ENST00000552445 CECR2Q9BXF3 1484 aa14.92□□□□□ -0.02
LARP4-218ENST00000552445 UNC13AQ9UPW8 1703 aa14.9□□□□□ -0.02
LARP4-218ENST00000552445 DCAF8L2P0C7V8 631 aa14.9□□□□□ -0.02
LARP4-218ENST00000552445 SHROOM4Q9ULL8 1493 aa14.82□□□□□ -0.04
LARP4-218ENST00000552445 CC2D2AQ9P2K1 1620 aa14.81□□□□□ -0.04
LARP4-218ENST00000552445 MYO15BQ96JP2 1530 aa14.81□□□□□ -0.04
LARP4-218ENST00000552445 PLPPR3Q6T4P5 718 aa14.77□□□□□ -0.05
LARP4-218ENST00000552445 EIF4G1Q04637 1599 aaKnown RBP14.65□□□□□ -0.06
LARP4-218ENST00000552445 CUX2O14529 1486 aa14.52□□□□□ -0.08
LARP4-218ENST00000552445 MSH5O43196 834 aa14.51□□□□□ -0.09
LARP4-218ENST00000552445 PIAS4Q8N2W9 510 aaPredicted RBP14.48□□□□□ -0.09
LARP4-218ENST00000552445 ADRA2BP18089 450 aa14.36□□□□□ -0.11
LARP4-218ENST00000552445 DCAF1Q9Y4B6 1507 aa14.36□□□□□ -0.11
LARP4-218ENST00000552445 SCRIBQ14160 1630 aa14.35□□□□□ -0.11
LARP4-218ENST00000552445 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
LARP4-218ENST00000552445 ERCC6Q03468 1493 aa14.29□□□□□ -0.12
LARP4-218ENST00000552445 ZCCHC6Q5VYS8 1495 aaKnown RBP14.25□□□□□ -0.13
LARP4-218ENST00000552445 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
LARP4-218ENST00000552445 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
LARP4-218ENST00000552445 POTEDQ86YR6 584 aa14.09□□□□□ -0.15
LARP4-218ENST00000552445 NCAPD3P42695 1498 aa14.04□□□□□ -0.16
LARP4-218ENST00000552445 NESP48681 1621 aa13.92□□□□□ -0.18
LARP4-218ENST00000552445 THOC2Q8NI27 1593 aaKnown RBP13.92□□□□□ -0.18
LARP4-218ENST00000552445 ATAD2BQ9ULI0 1458 aa13.87□□□□□ -0.19
LARP4-218ENST00000552445 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
LARP4-218ENST00000552445 SMARCA2P51531 1590 aa13.81□□□□□ -0.2
LARP4-218ENST00000552445 LAMC3Q9Y6N6 1575 aa13.79□□□□□ -0.2
LARP4-218ENST00000552445 PDS5BQ9NTI5 1447 aa13.77□□□□□ -0.21
LARP4-218ENST00000552445 OSCARQ8IYS5 282 aa13.75□□□□□ -0.21
LARP4-218ENST00000552445 BAZ1BQ9UIG0 1483 aaKnown RBP13.69□□□□□ -0.22
LARP4-218ENST00000552445 BAZ1AQ9NRL2 1556 aaPredicted RBP13.69□□□□□ -0.22
LARP4-218ENST00000552445 KIF21AQ7Z4S6 1674 aa13.66□□□□□ -0.22
LARP4-218ENST00000552445 MRC2Q9UBG0 1479 aa13.65□□□□□ -0.22
LARP4-218ENST00000552445 SMARCA4P51532 1647 aa13.64□□□□□ -0.23
LARP4-218ENST00000552445 WDR62O43379 1518 aa13.63□□□□□ -0.23
LARP4-218ENST00000552445 CADPSQ9ULU8 1353 aa13.58□□□□□ -0.24
LARP4-218ENST00000552445 PEG3Q9GZU2 1588 aa13.57□□□□□ -0.24
LARP4-218ENST00000552445 RIMBP3CA6NJZ7 1639 aa13.54□□□□□ -0.24
LARP4-218ENST00000552445 RIMBP3BA6NNM3 1639 aa13.54□□□□□ -0.24
LARP4-218ENST00000552445 RIMBP3Q9UFD9 1639 aa13.54□□□□□ -0.24
LARP4-218ENST00000552445 TRHP20396 242 aaPredicted RBP13.49□□□□□ -0.25
LARP4-218ENST00000552445 ARHGEF11O15085 1522 aa13.48□□□□□ -0.25
LARP4-218ENST00000552445 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
LARP4-218ENST00000552445 CYB5RLQ6IPT4 315 aa13.43□□□□□ -0.26
LARP4-218ENST00000552445 FANCD2Q9BXW9 1451 aa13.39□□□□□ -0.27
LARP4-218ENST00000552445 MROH2BQ7Z745 1585 aa13.33□□□□□ -0.28
LARP4-218ENST00000552445 ARAP1Q96P48 1450 aa13.29□□□□□ -0.28
LARP4-218ENST00000552445 URB2Q14146 1524 aaKnown RBP13.29□□□□□ -0.28
LARP4-218ENST00000552445 CFTRP13569 1480 aa13.28□□□□□ -0.28
LARP4-218ENST00000552445 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
LARP4-218ENST00000552445 RSF1Q96T23 1441 aaPredicted RBP13.25□□□□□ -0.29
LARP4-218ENST00000552445 IFT140Q96RY7 1462 aa13.24□□□□□ -0.29
LARP4-218ENST00000552445 ZNF608Q9ULD9 1512 aaPredicted RBP13.22□□□□□ -0.29
LARP4-218ENST00000552445 PELP1Q8IZL8 1130 aaKnown RBP13.21□□□□□ -0.29
LARP4-218ENST00000552445 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
LARP4-218ENST00000552445 DMRT2Q9Y5R5 561 aa13.13□□□□□ -0.31
LARP4-218ENST00000552445 MYT1Q01538 1121 aa13.12□□□□□ -0.31
LARP4-218ENST00000552445 EIF4G3O43432 1585 aaKnown RBP13.11□□□□□ -0.31
LARP4-218ENST00000552445 WIZO95785 1651 aa13.09□□□□□ -0.31
LARP4-218ENST00000552445 FBLN2P98095 1184 aa13.09□□□□□ -0.31
LARP4-218ENST00000552445 ILDR1Q86SU0 546 aaPredicted RBP13.08□□□□□ -0.32
LARP4-218ENST00000552445 EHMT2Q96KQ7 1210 aa13.08□□□□□ -0.32
LARP4-218ENST00000552445 CHD1O14646 1710 aa13.07□□□□□ -0.32
LARP4-218ENST00000552445 ABCC8Q09428 1581 aa13.05□□□□□ -0.32
LARP4-218ENST00000552445 TOPBP1Q92547 1522 aa13.04□□□□□ -0.32
LARP4-218ENST00000552445 AQRO60306 1485 aaKnown RBP eCLIP13.04□□□□□ -0.324e-8■■■■■ 32.5
LARP4-218ENST00000552445 CLASP1Q7Z460 1538 aa12.99□□□□□ -0.33
LARP4-218ENST00000552445 TARBP1Q13395 1621 aaKnown RBP12.96□□□□□ -0.33
LARP4-218ENST00000552445 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.33
LARP4-218ENST00000552445 PRDM2Q13029 1718 aa12.95□□□□□ -0.34
LARP4-218ENST00000552445 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
LARP4-218ENST00000552445 DNMBPQ6XZF7 1577 aa12.94□□□□□ -0.34
LARP4-218ENST00000552445 CHMP7Q8WUX9 453 aaPredicted RBP12.93□□□□□ -0.34
LARP4-218ENST00000552445 GAPVD1Q14C86 1478 aa12.92□□□□□ -0.34
LARP4-218ENST00000552445 PPP4R3CPQ6ZMV5 832 aa12.92□□□□□ -0.34
LARP4-218ENST00000552445 SNAPC4Q5SXM2 1469 aa12.89□□□□□ -0.35
LARP4-218ENST00000552445 POLA1P09884 1462 aaPredicted RBP12.88□□□□□ -0.35
LARP4-218ENST00000552445 MAGI1Q96QZ7 1491 aaPredicted RBP12.87□□□□□ -0.35
LARP4-218ENST00000552445 TDRD9Q8NDG6 1382 aaKnown RBP12.86□□□□□ -0.35
LARP4-218ENST00000552445 WDR97A6NE52 1622 aa12.85□□□□□ -0.35
LARP4-218ENST00000552445 SYNJ2O15056 1496 aa12.84□□□□□ -0.35
LARP4-218ENST00000552445 SOGA1O94964 1423 aa12.83□□□□□ -0.36
LARP4-218ENST00000552445 DAXXQ9UER7 740 aaPredicted RBP12.83□□□□□ -0.36
LARP4-218ENST00000552445 KDM4FA0A1W2PPD8 638 aa12.82□□□□□ -0.36
LARP4-218ENST00000552445 CCDC88BA6NC98 1476 aa12.81□□□□□ -0.36
LARP4-218ENST00000552445 RAD54L2Q9Y4B4 1467 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms