RNA–Protein interactions for RNA: ENST00000629575.2

UBAP2-212, Transcript of ubiquitin associated protein 2, humanhuman

TSL 2

Gene UBAP2, Length 3,460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-212ENST00000629575 NISCHQ9Y2I1 1504 aa18.15■□□□□ 0.5
UBAP2-212ENST00000629575 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
UBAP2-212ENST00000629575 ABCC9O60706 1549 aa15.82■□□□□ 0.12
UBAP2-212ENST00000629575 MYO15BQ96JP2 1530 aa15.33■□□□□ 0.05
UBAP2-212ENST00000629575 DCAF1Q9Y4B6 1507 aa15.32■□□□□ 0.04
UBAP2-212ENST00000629575 ZCCHC6Q5VYS8 1495 aaKnown RBP15.24■□□□□ 0.03
UBAP2-212ENST00000629575 RB1CC1Q8TDY2 1594 aa15.21■□□□□ 0.03
UBAP2-212ENST00000629575 NACADO15069 1562 aa15.1■□□□□ 0.01
UBAP2-212ENST00000629575 UNC13AQ9UPW8 1703 aa14.94□□□□□ -0.02
UBAP2-212ENST00000629575 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
UBAP2-212ENST00000629575 BICRAQ9NZM4 1560 aa14.78□□□□□ -0.04
UBAP2-212ENST00000629575 SHROOM4Q9ULL8 1493 aa14.7□□□□□ -0.06
UBAP2-212ENST00000629575 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
UBAP2-212ENST00000629575 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
UBAP2-212ENST00000629575 SCRIBQ14160 1630 aa14.44□□□□□ -0.1
UBAP2-212ENST00000629575 CC2D2AQ9P2K1 1620 aa14.42□□□□□ -0.1
UBAP2-212ENST00000629575 EIF4G1Q04637 1599 aaKnown RBP14.38□□□□□ -0.11
UBAP2-212ENST00000629575 CECR2Q9BXF3 1484 aa14.32□□□□□ -0.12
UBAP2-212ENST00000629575 PEG3Q9GZU2 1588 aa14.13□□□□□ -0.15
UBAP2-212ENST00000629575 SMARCA4P51532 1647 aa14.05□□□□□ -0.16
UBAP2-212ENST00000629575 BAZ1AQ9NRL2 1556 aaPredicted RBP14.05□□□□□ -0.16
UBAP2-212ENST00000629575 HMGXB3Q12766 1538 aa13.93□□□□□ -0.18
UBAP2-212ENST00000629575 SMARCA2P51531 1590 aa13.91□□□□□ -0.18
UBAP2-212ENST00000629575 MROH2BQ7Z745 1585 aa13.89□□□□□ -0.19
UBAP2-212ENST00000629575 NCAPD3P42695 1498 aa13.88□□□□□ -0.19
UBAP2-212ENST00000629575 CUX2O14529 1486 aa13.86□□□□□ -0.19
UBAP2-212ENST00000629575 SLC24A1O60721 1099 aa13.86□□□□□ -0.19
UBAP2-212ENST00000629575 ATAD2BQ9ULI0 1458 aa13.82□□□□□ -0.2
UBAP2-212ENST00000629575 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
UBAP2-212ENST00000629575 DNAJC5Q9H3Z4 198 aa13.78□□□□□ -0.2
UBAP2-212ENST00000629575 TOP2AP11388 1531 aaKnown RBP13.76□□□□□ -0.21
UBAP2-212ENST00000629575 WIZO95785 1651 aa13.75□□□□□ -0.21
UBAP2-212ENST00000629575 ERCC6Q03468 1493 aa13.68□□□□□ -0.22
UBAP2-212ENST00000629575 THOC2Q8NI27 1593 aaKnown RBP13.66□□□□□ -0.22
UBAP2-212ENST00000629575 LAMC3Q9Y6N6 1575 aa13.64□□□□□ -0.23
UBAP2-212ENST00000629575 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
UBAP2-212ENST00000629575 PRDM2Q13029 1718 aa13.62□□□□□ -0.23
UBAP2-212ENST00000629575 NESP48681 1621 aa13.58□□□□□ -0.24
UBAP2-212ENST00000629575 KIF21AQ7Z4S6 1674 aa13.56□□□□□ -0.24
UBAP2-212ENST00000629575 PDS5BQ9NTI5 1447 aa13.45□□□□□ -0.26
UBAP2-212ENST00000629575 CCDC88BA6NC98 1476 aa13.44□□□□□ -0.26
UBAP2-212ENST00000629575 WDR62O43379 1518 aa13.43□□□□□ -0.26
UBAP2-212ENST00000629575 CFTRP13569 1480 aa13.42□□□□□ -0.26
UBAP2-212ENST00000629575 MRC2Q9UBG0 1479 aa13.4□□□□□ -0.26
UBAP2-212ENST00000629575 CADPSQ9ULU8 1353 aa13.37□□□□□ -0.27
UBAP2-212ENST00000629575 CEP164Q9UPV0 1460 aa13.29□□□□□ -0.28
UBAP2-212ENST00000629575 FANCD2Q9BXW9 1451 aa13.24□□□□□ -0.29
UBAP2-212ENST00000629575 BIVM-ERCC5R4GMW8 1640 aa13.2□□□□□ -0.3
UBAP2-212ENST00000629575 URB2Q14146 1524 aaKnown RBP13.17□□□□□ -0.3
UBAP2-212ENST00000629575 ABCC8Q09428 1581 aa13.15□□□□□ -0.3
UBAP2-212ENST00000629575 WDR97A6NE52 1622 aa13.15□□□□□ -0.3
UBAP2-212ENST00000629575 DNMBPQ6XZF7 1577 aa13.14□□□□□ -0.31
UBAP2-212ENST00000629575 TOP2BQ02880 1626 aa13.11□□□□□ -0.31
UBAP2-212ENST00000629575 MYT1Q01538 1121 aa13.07□□□□□ -0.32
UBAP2-212ENST00000629575 IFT140Q96RY7 1462 aa13.06□□□□□ -0.32
UBAP2-212ENST00000629575 CUX1P39880 1505 aa13.05□□□□□ -0.32
UBAP2-212ENST00000629575 SUPT5HO00267 1087 aaKnown RBP13.05□□□□□ -0.32
UBAP2-212ENST00000629575 TTBK1Q5TCY1 1321 aaPredicted RBP13.05□□□□□ -0.32
UBAP2-212ENST00000629575 TOPBP1Q92547 1522 aa13.03□□□□□ -0.32
UBAP2-212ENST00000629575 TARBP1Q13395 1621 aaKnown RBP13.03□□□□□ -0.32
UBAP2-212ENST00000629575 RIMBP3CA6NJZ7 1639 aa13.02□□□□□ -0.33
UBAP2-212ENST00000629575 RIMBP3BA6NNM3 1639 aa13.02□□□□□ -0.33
UBAP2-212ENST00000629575 RIMBP3Q9UFD9 1639 aa13.02□□□□□ -0.33
UBAP2-212ENST00000629575 SYNJ1O43426 1573 aa13.01□□□□□ -0.33
UBAP2-212ENST00000629575 EIF4G3O43432 1585 aaKnown RBP13□□□□□ -0.33
UBAP2-212ENST00000629575 OSCARQ8IYS5 282 aa12.98□□□□□ -0.33
UBAP2-212ENST00000629575 TRIM41Q8WV44 630 aa12.97□□□□□ -0.33
UBAP2-212ENST00000629575 ZNF608Q9ULD9 1512 aaPredicted RBP12.95□□□□□ -0.34
UBAP2-212ENST00000629575 CHD1O14646 1710 aa12.95□□□□□ -0.34
UBAP2-212ENST00000629575 ABCA5Q8WWZ7 1642 aa12.93□□□□□ -0.34
UBAP2-212ENST00000629575 WRNQ14191 1432 aaPredicted RBP eCLIP12.93□□□□□ -0.34
UBAP2-212ENST00000629575 ABCA10Q8WWZ4 1543 aa12.92□□□□□ -0.34
UBAP2-212ENST00000629575 ARHGEF11O15085 1522 aa12.91□□□□□ -0.34
UBAP2-212ENST00000629575 DAXXQ9UER7 740 aaPredicted RBP12.91□□□□□ -0.34
UBAP2-212ENST00000629575 POLA1P09884 1462 aaPredicted RBP12.91□□□□□ -0.34
UBAP2-212ENST00000629575 PELP1Q8IZL8 1130 aaKnown RBP12.89□□□□□ -0.35
UBAP2-212ENST00000629575 FGD5Q6ZNL6 1462 aa12.87□□□□□ -0.35
UBAP2-212ENST00000629575 PBRM1Q86U86 1689 aa12.84□□□□□ -0.35
UBAP2-212ENST00000629575 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
UBAP2-212ENST00000629575 ERICH3Q5RHP9 1530 aa12.8□□□□□ -0.36
UBAP2-212ENST00000629575 APLP2Q06481 763 aa12.79□□□□□ -0.36
UBAP2-212ENST00000629575 ARAP1Q96P48 1450 aa12.78□□□□□ -0.36
UBAP2-212ENST00000629575 AQRO60306 1485 aaKnown RBP eCLIP12.78□□□□□ -0.362e-6■■■□□ 18.3
UBAP2-212ENST00000629575 CUL7Q14999 1698 aa12.77□□□□□ -0.36
UBAP2-212ENST00000629575 MAGI1Q96QZ7 1491 aaPredicted RBP12.76□□□□□ -0.37
UBAP2-212ENST00000629575 SOGA1O94964 1423 aa12.74□□□□□ -0.37
UBAP2-212ENST00000629575 EEA1Q15075 1411 aa12.74□□□□□ -0.37
UBAP2-212ENST00000629575 RAD54L2Q9Y4B4 1467 aa12.73□□□□□ -0.37
UBAP2-212ENST00000629575 SNAPC4Q5SXM2 1469 aa12.73□□□□□ -0.37
UBAP2-212ENST00000629575 ADAMTS12P58397 1594 aa12.72□□□□□ -0.37
UBAP2-212ENST00000629575 GRIN2BQ13224 1484 aa12.71□□□□□ -0.38
UBAP2-212ENST00000629575 SYNJ2O15056 1496 aa12.68□□□□□ -0.38
UBAP2-212ENST00000629575 KIF21BO75037 1637 aa12.67□□□□□ -0.38
UBAP2-212ENST00000629575 GAPVD1Q14C86 1478 aa12.66□□□□□ -0.38
UBAP2-212ENST00000629575 PRKCSHP14314 528 aaPredicted RBP12.66□□□□□ -0.38
UBAP2-212ENST00000629575 CHIC1Q5VXU3 224 aa12.64□□□□□ -0.39
UBAP2-212ENST00000629575 KIF27Q86VH2 1401 aa12.64□□□□□ -0.39
UBAP2-212ENST00000629575 TDRD9Q8NDG6 1382 aaKnown RBP12.64□□□□□ -0.39
UBAP2-212ENST00000629575 PRXQ9BXM0 1461 aa12.63□□□□□ -0.39
UBAP2-212ENST00000629575 SHROOM2Q13796 1616 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms