RNA–Protein interactions for RNA: ENST00000531018.5

SYVN1-213, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 826 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-213ENST00000531018 NISCHQ9Y2I1 1504 aa22.58■■□□□ 1.21
SYVN1-213ENST00000531018 CCDC180Q9P1Z9 1646 aa20.09■□□□□ 0.81
SYVN1-213ENST00000531018 ABCC9O60706 1549 aa19.69■□□□□ 0.74
SYVN1-213ENST00000531018 NACADO15069 1562 aa18.88■□□□□ 0.61
SYVN1-213ENST00000531018 RB1CC1Q8TDY2 1594 aa18.87■□□□□ 0.61
SYVN1-213ENST00000531018 MYO15BQ96JP2 1530 aa18.84■□□□□ 0.61
SYVN1-213ENST00000531018 ZCCHC6Q5VYS8 1495 aaKnown RBP18.81■□□□□ 0.6
SYVN1-213ENST00000531018 DCAF1Q9Y4B6 1507 aa18.74■□□□□ 0.59
SYVN1-213ENST00000531018 DCAF8L2P0C7V8 631 aa18.68■□□□□ 0.58
SYVN1-213ENST00000531018 DNAJC5BQ9UF47 199 aa18.51■□□□□ 0.55
SYVN1-213ENST00000531018 UNC13AQ9UPW8 1703 aa18.51■□□□□ 0.55
SYVN1-213ENST00000531018 BICRAQ9NZM4 1560 aa18.36■□□□□ 0.53
SYVN1-213ENST00000531018 PABPN1Q86U42 306 aaKnown RBP eCLIP18.35■□□□□ 0.53
SYVN1-213ENST00000531018 SCRIBQ14160 1630 aa18.24■□□□□ 0.51
SYVN1-213ENST00000531018 SHROOM4Q9ULL8 1493 aa18.16■□□□□ 0.5
SYVN1-213ENST00000531018 EIF4G1Q04637 1599 aaKnown RBP17.83■□□□□ 0.44
SYVN1-213ENST00000531018 CC2D2AQ9P2K1 1620 aa17.75■□□□□ 0.43
SYVN1-213ENST00000531018 CECR2Q9BXF3 1484 aa17.71■□□□□ 0.43
SYVN1-213ENST00000531018 SMARCA4P51532 1647 aa17.51■□□□□ 0.39
SYVN1-213ENST00000531018 BAZ1AQ9NRL2 1556 aaPredicted RBP17.48■□□□□ 0.39
SYVN1-213ENST00000531018 NCAPD3P42695 1498 aa17.44■□□□□ 0.38
SYVN1-213ENST00000531018 ATAD2BQ9ULI0 1458 aa17.42■□□□□ 0.38
SYVN1-213ENST00000531018 PEG3Q9GZU2 1588 aa17.4■□□□□ 0.38
SYVN1-213ENST00000531018 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
SYVN1-213ENST00000531018 SMARCA2P51531 1590 aa17.38■□□□□ 0.37
SYVN1-213ENST00000531018 HMGXB3Q12766 1538 aa17.33■□□□□ 0.37
SYVN1-213ENST00000531018 BAZ1BQ9UIG0 1483 aaKnown RBP17.23■□□□□ 0.35
SYVN1-213ENST00000531018 RSF1Q96T23 1441 aaPredicted RBP17.19■□□□□ 0.34
SYVN1-213ENST00000531018 WIZO95785 1651 aa17.19■□□□□ 0.34
SYVN1-213ENST00000531018 TOP2AP11388 1531 aaKnown RBP17.01■□□□□ 0.31
SYVN1-213ENST00000531018 ERCC6Q03468 1493 aa16.99■□□□□ 0.31
SYVN1-213ENST00000531018 DNAJC5Q9H3Z4 198 aa16.98■□□□□ 0.31
SYVN1-213ENST00000531018 NESP48681 1621 aa16.96■□□□□ 0.3
SYVN1-213ENST00000531018 LAMC3Q9Y6N6 1575 aa16.95■□□□□ 0.3
SYVN1-213ENST00000531018 CUX2O14529 1486 aa16.92■□□□□ 0.3
SYVN1-213ENST00000531018 CADPSQ9ULU8 1353 aa16.89■□□□□ 0.29
SYVN1-213ENST00000531018 CCDC88BA6NC98 1476 aa16.81■□□□□ 0.28
SYVN1-213ENST00000531018 CFTRP13569 1480 aa16.81■□□□□ 0.28
SYVN1-213ENST00000531018 PDS5BQ9NTI5 1447 aa16.79■□□□□ 0.28
SYVN1-213ENST00000531018 KIF21AQ7Z4S6 1674 aa16.78■□□□□ 0.28
SYVN1-213ENST00000531018 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
SYVN1-213ENST00000531018 PRDM2Q13029 1718 aa16.7■□□□□ 0.26
SYVN1-213ENST00000531018 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
SYVN1-213ENST00000531018 CEP164Q9UPV0 1460 aa16.63■□□□□ 0.25
SYVN1-213ENST00000531018 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
SYVN1-213ENST00000531018 SUPT5HO00267 1087 aaKnown RBP16.62■□□□□ 0.25
SYVN1-213ENST00000531018 WDR62O43379 1518 aa16.61■□□□□ 0.25
SYVN1-213ENST00000531018 URB2Q14146 1524 aaKnown RBP16.54■□□□□ 0.24
SYVN1-213ENST00000531018 ABCC8Q09428 1581 aa16.43■□□□□ 0.22
SYVN1-213ENST00000531018 TOPBP1Q92547 1522 aa16.43■□□□□ 0.22
SYVN1-213ENST00000531018 DNMBPQ6XZF7 1577 aa16.41■□□□□ 0.22
SYVN1-213ENST00000531018 TRIM41Q8WV44 630 aa16.32■□□□□ 0.2
SYVN1-213ENST00000531018 CUX1P39880 1505 aa16.31■□□□□ 0.2
SYVN1-213ENST00000531018 IFT140Q96RY7 1462 aa16.31■□□□□ 0.2
SYVN1-213ENST00000531018 TARBP1Q13395 1621 aaKnown RBP16.29■□□□□ 0.2
SYVN1-213ENST00000531018 POLA1P09884 1462 aaPredicted RBP16.29■□□□□ 0.2
SYVN1-213ENST00000531018 ZNF608Q9ULD9 1512 aaPredicted RBP16.24■□□□□ 0.19
SYVN1-213ENST00000531018 FGD5Q6ZNL6 1462 aa16.22■□□□□ 0.19
SYVN1-213ENST00000531018 SOGA1O94964 1423 aa16.19■□□□□ 0.18
SYVN1-213ENST00000531018 BIVM-ERCC5R4GMW8 1640 aa16.19■□□□□ 0.18
SYVN1-213ENST00000531018 RAD54L2Q9Y4B4 1467 aa16.19■□□□□ 0.18
SYVN1-213ENST00000531018 TOP2BQ02880 1626 aa16.18■□□□□ 0.18
SYVN1-213ENST00000531018 EIF4G3O43432 1585 aaKnown RBP16.17■□□□□ 0.18
SYVN1-213ENST00000531018 WRNQ14191 1432 aaPredicted RBP eCLIP16.17■□□□□ 0.18
SYVN1-213ENST00000531018 WDR97A6NE52 1622 aa16.16■□□□□ 0.18
SYVN1-213ENST00000531018 SYNJ1O43426 1573 aa16.16■□□□□ 0.18
SYVN1-213ENST00000531018 OSCARQ8IYS5 282 aa16.15■□□□□ 0.18
SYVN1-213ENST00000531018 AQRO60306 1485 aaKnown RBP eCLIP16.13■□□□□ 0.172e-9■■■■□ 22.2
SYVN1-213ENST00000531018 ABCA10Q8WWZ4 1543 aa16.1■□□□□ 0.17
SYVN1-213ENST00000531018 TDRD9Q8NDG6 1382 aaKnown RBP16.09■□□□□ 0.17
SYVN1-213ENST00000531018 ABCA5Q8WWZ7 1642 aa16.06■□□□□ 0.16
SYVN1-213ENST00000531018 GRIN2BQ13224 1484 aa16.01■□□□□ 0.15
SYVN1-213ENST00000531018 GAPVD1Q14C86 1478 aa16.01■□□□□ 0.15
SYVN1-213ENST00000531018 PBRM1Q86U86 1689 aa15.99■□□□□ 0.15
SYVN1-213ENST00000531018 MAGI1Q96QZ7 1491 aaPredicted RBP15.99■□□□□ 0.15
SYVN1-213ENST00000531018 CHD1O14646 1710 aa15.98■□□□□ 0.15
SYVN1-213ENST00000531018 RIMBP3CA6NJZ7 1639 aa15.97■□□□□ 0.15
SYVN1-213ENST00000531018 RIMBP3BA6NNM3 1639 aa15.97■□□□□ 0.15
SYVN1-213ENST00000531018 RIMBP3Q9UFD9 1639 aa15.97■□□□□ 0.15
SYVN1-213ENST00000531018 SNAPC4Q5SXM2 1469 aa15.97■□□□□ 0.15
SYVN1-213ENST00000531018 ARHGEF11O15085 1522 aa15.92■□□□□ 0.14
SYVN1-213ENST00000531018 SYNJ2O15056 1496 aa15.91■□□□□ 0.14
SYVN1-213ENST00000531018 ERICH3Q5RHP9 1530 aa15.91■□□□□ 0.14
SYVN1-213ENST00000531018 FBLN2P98095 1184 aa15.89■□□□□ 0.13
SYVN1-213ENST00000531018 ADAMTS12P58397 1594 aa15.87■□□□□ 0.13
SYVN1-213ENST00000531018 CHMP7Q8WUX9 453 aaPredicted RBP15.84■□□□□ 0.13
SYVN1-213ENST00000531018 FHAD1B1AJZ9 1412 aa15.84■□□□□ 0.13
SYVN1-213ENST00000531018 CLASP1Q7Z460 1538 aa15.84■□□□□ 0.13
SYVN1-213ENST00000531018 CYB5RLQ6IPT4 315 aa15.83■□□□□ 0.12
SYVN1-213ENST00000531018 KIF27Q86VH2 1401 aa15.83■□□□□ 0.12
SYVN1-213ENST00000531018 IGF1RP08069 1367 aa15.81■□□□□ 0.12
SYVN1-213ENST00000531018 GRIN2AQ12879 1464 aa15.81■□□□□ 0.12
SYVN1-213ENST00000531018 NUP160Q12769 1436 aa15.77■□□□□ 0.12
SYVN1-213ENST00000531018 ARAP1Q96P48 1450 aa15.77■□□□□ 0.11
SYVN1-213ENST00000531018 CUL7Q14999 1698 aa15.76■□□□□ 0.11
SYVN1-213ENST00000531018 CEP170Q5SW79 1584 aa15.75■□□□□ 0.11
SYVN1-213ENST00000531018 RUSC2Q8N2Y8 1516 aa15.71■□□□□ 0.11
SYVN1-213ENST00000531018 TRHP20396 242 aaPredicted RBP15.69■□□□□ 0.1
SYVN1-213ENST00000531018 SHROOM2Q13796 1616 aa15.68■□□□□ 0.1
SYVN1-213ENST00000531018 CARMIL1Q5VZK9 1371 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms