RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 AEBP2Q6ZN18 517 aaPredicted RBP14.45□□□□□ -0.1
PPP4R1-223ENST00000582933 NISCHQ9Y2I1 1504 aa14.43□□□□□ -0.1
PPP4R1-223ENST00000582933 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
PPP4R1-223ENST00000582933 POTEDQ86YR6 584 aa13.31□□□□□ -0.28
PPP4R1-223ENST00000582933 CCDC180Q9P1Z9 1646 aa12.83□□□□□ -0.36
PPP4R1-223ENST00000582933 SENP3Q9H4L4 574 aaPredicted RBP12.52□□□□□ -0.41
PPP4R1-223ENST00000582933 ABCC9O60706 1549 aa12.46□□□□□ -0.42
PPP4R1-223ENST00000582933 PHF23Q9BUL5 403 aaPredicted RBP12.2□□□□□ -0.46
PPP4R1-223ENST00000582933 ZCCHC6Q5VYS8 1495 aaKnown RBP12.07□□□□□ -0.48
PPP4R1-223ENST00000582933 NACADO15069 1562 aa12.04□□□□□ -0.48
PPP4R1-223ENST00000582933 RB1CC1Q8TDY2 1594 aa12.04□□□□□ -0.48
PPP4R1-223ENST00000582933 MYO15BQ96JP2 1530 aa12.02□□□□□ -0.48
PPP4R1-223ENST00000582933 DCAF1Q9Y4B6 1507 aa11.97□□□□□ -0.49
PPP4R1-223ENST00000582933 DCAF8L2P0C7V8 631 aa11.89□□□□□ -0.51
PPP4R1-223ENST00000582933 FOXD1Q16676 465 aa11.82□□□□□ -0.52
PPP4R1-223ENST00000582933 UNC13AQ9UPW8 1703 aa11.69□□□□□ -0.54
PPP4R1-223ENST00000582933 SCRIBQ14160 1630 aa11.68□□□□□ -0.54
PPP4R1-223ENST00000582933 BICRAQ9NZM4 1560 aa11.67□□□□□ -0.54
PPP4R1-223ENST00000582933 SHROOM4Q9ULL8 1493 aa11.63□□□□□ -0.55
PPP4R1-223ENST00000582933 PABPN1Q86U42 306 aaKnown RBP eCLIP11.6□□□□□ -0.55
PPP4R1-223ENST00000582933 MSH5O43196 834 aa11.53□□□□□ -0.56
PPP4R1-223ENST00000582933 EIF4G1Q04637 1599 aaKnown RBP11.37□□□□□ -0.59
PPP4R1-223ENST00000582933 DNAJC5BQ9UF47 199 aa11.35□□□□□ -0.59
PPP4R1-223ENST00000582933 CC2D2AQ9P2K1 1620 aa11.27□□□□□ -0.6
PPP4R1-223ENST00000582933 CECR2Q9BXF3 1484 aa11.21□□□□□ -0.61
PPP4R1-223ENST00000582933 SMARCA4P51532 1647 aa11.19□□□□□ -0.62
PPP4R1-223ENST00000582933 BAZ1AQ9NRL2 1556 aaPredicted RBP11.19□□□□□ -0.62
PPP4R1-223ENST00000582933 SMARCA2P51531 1590 aa11.12□□□□□ -0.63
PPP4R1-223ENST00000582933 NCAPD3P42695 1498 aa11.11□□□□□ -0.63
PPP4R1-223ENST00000582933 ATAD2BQ9ULI0 1458 aa11.11□□□□□ -0.63
PPP4R1-223ENST00000582933 MROH2BQ7Z745 1585 aa11.11□□□□□ -0.63
PPP4R1-223ENST00000582933 PEG3Q9GZU2 1588 aa11.11□□□□□ -0.63
PPP4R1-223ENST00000582933 HMGXB3Q12766 1538 aa11.09□□□□□ -0.63
PPP4R1-223ENST00000582933 BAZ1BQ9UIG0 1483 aaKnown RBP11.03□□□□□ -0.64
PPP4R1-223ENST00000582933 RSF1Q96T23 1441 aaPredicted RBP11.01□□□□□ -0.65
PPP4R1-223ENST00000582933 PLPPR3Q6T4P5 718 aa10.96□□□□□ -0.65
PPP4R1-223ENST00000582933 WIZO95785 1651 aa10.95□□□□□ -0.66
PPP4R1-223ENST00000582933 MYT1Q01538 1121 aa10.92□□□□□ -0.66
PPP4R1-223ENST00000582933 TOP2AP11388 1531 aaKnown RBP10.91□□□□□ -0.66
PPP4R1-223ENST00000582933 PELP1Q8IZL8 1130 aaKnown RBP10.84□□□□□ -0.67
PPP4R1-223ENST00000582933 LAMC3Q9Y6N6 1575 aa10.81□□□□□ -0.68
PPP4R1-223ENST00000582933 NESP48681 1621 aa10.8□□□□□ -0.68
PPP4R1-223ENST00000582933 CADPSQ9ULU8 1353 aa10.77□□□□□ -0.69
PPP4R1-223ENST00000582933 ERCC6Q03468 1493 aa10.75□□□□□ -0.69
PPP4R1-223ENST00000582933 PIAS4Q8N2W9 510 aaPredicted RBP10.75□□□□□ -0.69
PPP4R1-223ENST00000582933 CCDC88BA6NC98 1476 aa10.74□□□□□ -0.69
PPP4R1-223ENST00000582933 CFTRP13569 1480 aa10.74□□□□□ -0.69
PPP4R1-223ENST00000582933 PDS5BQ9NTI5 1447 aa10.72□□□□□ -0.69
PPP4R1-223ENST00000582933 TTBK1Q5TCY1 1321 aaPredicted RBP10.68□□□□□ -0.7
PPP4R1-223ENST00000582933 THOC2Q8NI27 1593 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-223ENST00000582933 SUPT5HO00267 1087 aaKnown RBP10.66□□□□□ -0.7
PPP4R1-223ENST00000582933 CUX2O14529 1486 aa10.66□□□□□ -0.7
PPP4R1-223ENST00000582933 FANCD2Q9BXW9 1451 aa10.66□□□□□ -0.7
PPP4R1-223ENST00000582933 KIF21AQ7Z4S6 1674 aa10.66□□□□□ -0.7
PPP4R1-223ENST00000582933 CEP164Q9UPV0 1460 aa10.65□□□□□ -0.7
PPP4R1-223ENST00000582933 SLC24A1O60721 1099 aa10.64□□□□□ -0.71
PPP4R1-223ENST00000582933 CACNB1Q02641 598 aaPredicted RBP10.64□□□□□ -0.71
PPP4R1-223ENST00000582933 MRC2Q9UBG0 1479 aa10.63□□□□□ -0.71
PPP4R1-223ENST00000582933 PRDM2Q13029 1718 aa10.61□□□□□ -0.71
PPP4R1-223ENST00000582933 WDR62O43379 1518 aa10.61□□□□□ -0.71
PPP4R1-223ENST00000582933 URB2Q14146 1524 aaKnown RBP10.55□□□□□ -0.72
PPP4R1-223ENST00000582933 TOPBP1Q92547 1522 aa10.49□□□□□ -0.73
PPP4R1-223ENST00000582933 ABCC8Q09428 1581 aa10.49□□□□□ -0.73
PPP4R1-223ENST00000582933 DNMBPQ6XZF7 1577 aa10.49□□□□□ -0.73
PPP4R1-223ENST00000582933 CUX1P39880 1505 aa10.43□□□□□ -0.74
PPP4R1-223ENST00000582933 IFT140Q96RY7 1462 aa10.42□□□□□ -0.74
PPP4R1-223ENST00000582933 POLA1P09884 1462 aaPredicted RBP10.42□□□□□ -0.74
PPP4R1-223ENST00000582933 FGD5Q6ZNL6 1462 aa10.39□□□□□ -0.75
PPP4R1-223ENST00000582933 TARBP1Q13395 1621 aaKnown RBP10.37□□□□□ -0.75
PPP4R1-223ENST00000582933 WRNQ14191 1432 aaPredicted RBP eCLIP10.37□□□□□ -0.75
PPP4R1-223ENST00000582933 ZNF608Q9ULD9 1512 aaPredicted RBP10.35□□□□□ -0.75
PPP4R1-223ENST00000582933 TOP2BQ02880 1626 aa10.35□□□□□ -0.75
PPP4R1-223ENST00000582933 BIVM-ERCC5R4GMW8 1640 aa10.35□□□□□ -0.75
PPP4R1-223ENST00000582933 SYNJ1O43426 1573 aa10.35□□□□□ -0.75
PPP4R1-223ENST00000582933 EIF4G3O43432 1585 aaKnown RBP10.35□□□□□ -0.75
PPP4R1-223ENST00000582933 SOGA1O94964 1423 aa10.33□□□□□ -0.76
PPP4R1-223ENST00000582933 WDR97A6NE52 1622 aa10.33□□□□□ -0.76
PPP4R1-223ENST00000582933 RAD54L2Q9Y4B4 1467 aa10.33□□□□□ -0.76
PPP4R1-223ENST00000582933 ABCA10Q8WWZ4 1543 aa10.3□□□□□ -0.76
PPP4R1-223ENST00000582933 AQRO60306 1485 aaKnown RBP eCLIP10.28□□□□□ -0.767e-12■□□□□ 9.9
PPP4R1-223ENST00000582933 ABCA5Q8WWZ7 1642 aa10.27□□□□□ -0.77
PPP4R1-223ENST00000582933 TDRD9Q8NDG6 1382 aaKnown RBP10.26□□□□□ -0.77
PPP4R1-223ENST00000582933 PPP6R1Q9UPN7 881 aa10.25□□□□□ -0.77
PPP4R1-223ENST00000582933 GRIN2BQ13224 1484 aa10.24□□□□□ -0.77
PPP4R1-223ENST00000582933 ADRA2BP18089 450 aa10.24□□□□□ -0.77
PPP4R1-223ENST00000582933 GAPVD1Q14C86 1478 aa10.23□□□□□ -0.77
PPP4R1-223ENST00000582933 SNAPC4Q5SXM2 1469 aa10.23□□□□□ -0.77
PPP4R1-223ENST00000582933 MAGI1Q96QZ7 1491 aaPredicted RBP10.23□□□□□ -0.77
PPP4R1-223ENST00000582933 POTEHQ6S545 545 aa10.2□□□□□ -0.78
PPP4R1-223ENST00000582933 DNAJC5Q9H3Z4 198 aa10.2□□□□□ -0.78
PPP4R1-223ENST00000582933 PBRM1Q86U86 1689 aa10.19□□□□□ -0.78
PPP4R1-223ENST00000582933 ERICH3Q5RHP9 1530 aa10.18□□□□□ -0.78
PPP4R1-223ENST00000582933 SYNJ2O15056 1496 aa10.18□□□□□ -0.78
PPP4R1-223ENST00000582933 ADAMTS12P58397 1594 aa10.18□□□□□ -0.78
PPP4R1-223ENST00000582933 ERICH6Q7L0X2 663 aa10.17□□□□□ -0.78
PPP4R1-223ENST00000582933 KIF27Q86VH2 1401 aa10.16□□□□□ -0.78
PPP4R1-223ENST00000582933 CHD1O14646 1710 aa10.15□□□□□ -0.78
PPP4R1-223ENST00000582933 OSCARQ8IYS5 282 aa10.13□□□□□ -0.79
PPP4R1-223ENST00000582933 FHAD1B1AJZ9 1412 aa10.13□□□□□ -0.79
PPP4R1-223ENST00000582933 GRIN2AQ12879 1464 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms