RNA–Protein interactions for RNA: ENST00000583092.1

PPP4R1-224, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-224ENST00000583092 NISCHQ9Y2I1 1504 aa25.19■■□□□ 1.62
PPP4R1-224ENST00000583092 ABCC9O60706 1549 aa22.6■■□□□ 1.21
PPP4R1-224ENST00000583092 CCDC180Q9P1Z9 1646 aa22.52■■□□□ 1.2
PPP4R1-224ENST00000583092 DCAF8L2P0C7V8 631 aa21.55■■□□□ 1.04
PPP4R1-224ENST00000583092 RB1CC1Q8TDY2 1594 aa21.53■■□□□ 1.04
PPP4R1-224ENST00000583092 NACADO15069 1562 aa21.39■■□□□ 1.01
PPP4R1-224ENST00000583092 DNAJC5BQ9UF47 199 aa21.15■□□□□ 0.98
PPP4R1-224ENST00000583092 PABPN1Q86U42 306 aaKnown RBP eCLIP21.14■□□□□ 0.97
PPP4R1-224ENST00000583092 MYO15BQ96JP2 1530 aa21.08■□□□□ 0.96
PPP4R1-224ENST00000583092 ZCCHC6Q5VYS8 1495 aaKnown RBP20.84■□□□□ 0.93
PPP4R1-224ENST00000583092 UNC13AQ9UPW8 1703 aa20.81■□□□□ 0.92
PPP4R1-224ENST00000583092 DCAF1Q9Y4B6 1507 aa20.8■□□□□ 0.92
PPP4R1-224ENST00000583092 BICRAQ9NZM4 1560 aa20.74■□□□□ 0.91
PPP4R1-224ENST00000583092 SHROOM4Q9ULL8 1493 aa20.62■□□□□ 0.89
PPP4R1-224ENST00000583092 SCRIBQ14160 1630 aa20.55■□□□□ 0.88
PPP4R1-224ENST00000583092 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
PPP4R1-224ENST00000583092 CC2D2AQ9P2K1 1620 aa20.35■□□□□ 0.85
PPP4R1-224ENST00000583092 EIF4G1Q04637 1599 aaKnown RBP20.32■□□□□ 0.84
PPP4R1-224ENST00000583092 NCAPD3P42695 1498 aa19.76■□□□□ 0.75
PPP4R1-224ENST00000583092 ATAD2BQ9ULI0 1458 aa19.67■□□□□ 0.74
PPP4R1-224ENST00000583092 SMARCA2P51531 1590 aa19.66■□□□□ 0.74
PPP4R1-224ENST00000583092 ERCC6Q03468 1493 aa19.61■□□□□ 0.73
PPP4R1-224ENST00000583092 SMARCA4P51532 1647 aa19.59■□□□□ 0.73
PPP4R1-224ENST00000583092 BAZ1AQ9NRL2 1556 aaPredicted RBP19.58■□□□□ 0.73
PPP4R1-224ENST00000583092 HMGXB3Q12766 1538 aa19.55■□□□□ 0.72
PPP4R1-224ENST00000583092 BAZ1BQ9UIG0 1483 aaKnown RBP19.54■□□□□ 0.72
PPP4R1-224ENST00000583092 DNAJC5Q9H3Z4 198 aa19.52■□□□□ 0.72
PPP4R1-224ENST00000583092 CUX2O14529 1486 aa19.49■□□□□ 0.71
PPP4R1-224ENST00000583092 PEG3Q9GZU2 1588 aa19.39■□□□□ 0.69
PPP4R1-224ENST00000583092 MROH2BQ7Z745 1585 aa19.37■□□□□ 0.69
PPP4R1-224ENST00000583092 NESP48681 1621 aa19.36■□□□□ 0.69
PPP4R1-224ENST00000583092 PDS5BQ9NTI5 1447 aa19.3■□□□□ 0.68
PPP4R1-224ENST00000583092 LAMC3Q9Y6N6 1575 aa19.27■□□□□ 0.68
PPP4R1-224ENST00000583092 CADPSQ9ULU8 1353 aa19.21■□□□□ 0.67
PPP4R1-224ENST00000583092 WIZO95785 1651 aa19.11■□□□□ 0.65
PPP4R1-224ENST00000583092 THOC2Q8NI27 1593 aaKnown RBP19.07■□□□□ 0.64
PPP4R1-224ENST00000583092 RSF1Q96T23 1441 aaPredicted RBP19.05■□□□□ 0.64
PPP4R1-224ENST00000583092 KIF21AQ7Z4S6 1674 aa19.03■□□□□ 0.64
PPP4R1-224ENST00000583092 MRC2Q9UBG0 1479 aa19.03■□□□□ 0.64
PPP4R1-224ENST00000583092 CEP164Q9UPV0 1460 aa18.97■□□□□ 0.63
PPP4R1-224ENST00000583092 FANCD2Q9BXW9 1451 aa18.95■□□□□ 0.62
PPP4R1-224ENST00000583092 CFTRP13569 1480 aa18.93■□□□□ 0.62
PPP4R1-224ENST00000583092 TOP2AP11388 1531 aaKnown RBP18.93■□□□□ 0.62
PPP4R1-224ENST00000583092 WDR62O43379 1518 aa18.9■□□□□ 0.62
PPP4R1-224ENST00000583092 OSCARQ8IYS5 282 aa18.78■□□□□ 0.6
PPP4R1-224ENST00000583092 TRIM41Q8WV44 630 aa18.75■□□□□ 0.59
PPP4R1-224ENST00000583092 CCDC88BA6NC98 1476 aa18.75■□□□□ 0.59
PPP4R1-224ENST00000583092 URB2Q14146 1524 aaKnown RBP18.71■□□□□ 0.59
PPP4R1-224ENST00000583092 ABCC8Q09428 1581 aa18.64■□□□□ 0.58
PPP4R1-224ENST00000583092 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
PPP4R1-224ENST00000583092 PRDM2Q13029 1718 aa18.59■□□□□ 0.57
PPP4R1-224ENST00000583092 TOPBP1Q92547 1522 aa18.55■□□□□ 0.56
PPP4R1-224ENST00000583092 ZNF608Q9ULD9 1512 aaPredicted RBP18.49■□□□□ 0.55
PPP4R1-224ENST00000583092 DNMBPQ6XZF7 1577 aa18.47■□□□□ 0.55
PPP4R1-224ENST00000583092 FBLN2P98095 1184 aa18.46■□□□□ 0.55
PPP4R1-224ENST00000583092 SUPT5HO00267 1087 aaKnown RBP18.42■□□□□ 0.54
PPP4R1-224ENST00000583092 AQRO60306 1485 aaKnown RBP eCLIP18.4■□□□□ 0.547e-12■■□□□ 13.1
PPP4R1-224ENST00000583092 SOGA1O94964 1423 aa18.39■□□□□ 0.53
PPP4R1-224ENST00000583092 POLA1P09884 1462 aaPredicted RBP18.36■□□□□ 0.53
PPP4R1-224ENST00000583092 EIF4G3O43432 1585 aaKnown RBP18.34■□□□□ 0.53
PPP4R1-224ENST00000583092 TDRD9Q8NDG6 1382 aaKnown RBP18.33■□□□□ 0.53
PPP4R1-224ENST00000583092 CHMP7Q8WUX9 453 aaPredicted RBP18.32■□□□□ 0.52
PPP4R1-224ENST00000583092 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
PPP4R1-224ENST00000583092 RAD54L2Q9Y4B4 1467 aa18.31■□□□□ 0.52
PPP4R1-224ENST00000583092 TARBP1Q13395 1621 aaKnown RBP18.3■□□□□ 0.52
PPP4R1-224ENST00000583092 RIMBP3CA6NJZ7 1639 aa18.27■□□□□ 0.51
PPP4R1-224ENST00000583092 RIMBP3BA6NNM3 1639 aa18.27■□□□□ 0.51
PPP4R1-224ENST00000583092 RIMBP3Q9UFD9 1639 aa18.27■□□□□ 0.51
PPP4R1-224ENST00000583092 FGD5Q6ZNL6 1462 aa18.26■□□□□ 0.51
PPP4R1-224ENST00000583092 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
PPP4R1-224ENST00000583092 WDR97A6NE52 1622 aa18.2■□□□□ 0.5
PPP4R1-224ENST00000583092 CUX1P39880 1505 aa18.2■□□□□ 0.5
PPP4R1-224ENST00000583092 GRIN2BQ13224 1484 aa18.2■□□□□ 0.5
PPP4R1-224ENST00000583092 SNAPC4Q5SXM2 1469 aa18.18■□□□□ 0.5
PPP4R1-224ENST00000583092 TRHP20396 242 aaPredicted RBP18.17■□□□□ 0.5
PPP4R1-224ENST00000583092 MAGI1Q96QZ7 1491 aaPredicted RBP18.17■□□□□ 0.5
PPP4R1-224ENST00000583092 CHD1O14646 1710 aa18.17■□□□□ 0.5
PPP4R1-224ENST00000583092 GAPVD1Q14C86 1478 aa18.13■□□□□ 0.49
PPP4R1-224ENST00000583092 SYNJ2O15056 1496 aa18.11■□□□□ 0.49
PPP4R1-224ENST00000583092 SYNJ1O43426 1573 aa18.1■□□□□ 0.49
PPP4R1-224ENST00000583092 WRNQ14191 1432 aaPredicted RBP eCLIP18.1■□□□□ 0.49
PPP4R1-224ENST00000583092 ABCA10Q8WWZ4 1543 aa18.07■□□□□ 0.48
PPP4R1-224ENST00000583092 ARAP1Q96P48 1450 aa18.06■□□□□ 0.48
PPP4R1-224ENST00000583092 CLASP1Q7Z460 1538 aa17.98■□□□□ 0.47
PPP4R1-224ENST00000583092 PBRM1Q86U86 1689 aa17.95■□□□□ 0.46
PPP4R1-224ENST00000583092 TOP2BQ02880 1626 aa17.93■□□□□ 0.46
PPP4R1-224ENST00000583092 ABCA5Q8WWZ7 1642 aa17.93■□□□□ 0.46
PPP4R1-224ENST00000583092 FHAD1B1AJZ9 1412 aa17.92■□□□□ 0.46
PPP4R1-224ENST00000583092 GRIN2AQ12879 1464 aa17.91■□□□□ 0.46
PPP4R1-224ENST00000583092 BIVM-ERCC5R4GMW8 1640 aa17.88■□□□□ 0.45
PPP4R1-224ENST00000583092 ERICH3Q5RHP9 1530 aa17.85■□□□□ 0.45
PPP4R1-224ENST00000583092 NUP160Q12769 1436 aa17.83■□□□□ 0.45
PPP4R1-224ENST00000583092 JPH4Q96JJ6 628 aa17.82■□□□□ 0.44
PPP4R1-224ENST00000583092 ADAMTS12P58397 1594 aa17.82■□□□□ 0.44
PPP4R1-224ENST00000583092 NPM1P06748 294 aaKnown RBP eCLIP17.77■□□□□ 0.44
PPP4R1-224ENST00000583092 CEP170Q5SW79 1584 aa17.76■□□□□ 0.43
PPP4R1-224ENST00000583092 KIF27Q86VH2 1401 aa17.74■□□□□ 0.43
PPP4R1-224ENST00000583092 PRG4Q92954 1404 aaPredicted RBP17.74■□□□□ 0.43
PPP4R1-224ENST00000583092 IGF1RP08069 1367 aa17.68■□□□□ 0.42
PPP4R1-224ENST00000583092 ERCC6L2Q5T890 1561 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms