RNA–Protein interactions for RNA: ENST00000550522.5

LARP4-216, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 4

Gene LARP4, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-216ENST00000550522 AEBP2Q6ZN18 517 aaPredicted RBP21.25■□□□□ 0.99
LARP4-216ENST00000550522 CHIC1Q5VXU3 224 aa19.95■□□□□ 0.78
LARP4-216ENST00000550522 SENP3Q9H4L4 574 aaPredicted RBP18.07■□□□□ 0.48
LARP4-216ENST00000550522 PHF23Q9BUL5 403 aaPredicted RBP17.91■□□□□ 0.46
LARP4-216ENST00000550522 FOXD1Q16676 465 aa16.94■□□□□ 0.3
LARP4-216ENST00000550522 PLPPR3Q6T4P5 718 aa15.86■□□□□ 0.13
LARP4-216ENST00000550522 MSH5O43196 834 aa15.83■□□□□ 0.12
LARP4-216ENST00000550522 POTEDQ86YR6 584 aa15.83■□□□□ 0.12
LARP4-216ENST00000550522 PIAS4Q8N2W9 510 aaPredicted RBP15.8■□□□□ 0.12
LARP4-216ENST00000550522 PPP6R1Q9UPN7 881 aa15.76■□□□□ 0.11
LARP4-216ENST00000550522 ADRA2BP18089 450 aa15.73■□□□□ 0.11
LARP4-216ENST00000550522 MAPK8IP2Q13387 824 aaPredicted RBP14.54□□□□□ -0.08
LARP4-216ENST00000550522 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
LARP4-216ENST00000550522 SCAF1Q9H7N4 1312 aaKnown RBP14.29□□□□□ -0.12
LARP4-216ENST00000550522 NISCHQ9Y2I1 1504 aa14.26□□□□□ -0.13
LARP4-216ENST00000550522 PPP4R3CPQ6ZMV5 832 aa13.95□□□□□ -0.18
LARP4-216ENST00000550522 DCAF8L1A6NGE4 600 aa13.92□□□□□ -0.18
LARP4-216ENST00000550522 CACNB1Q02641 598 aaPredicted RBP13.82□□□□□ -0.2
LARP4-216ENST00000550522 HOXD11P31277 338 aaPredicted RBP13.69□□□□□ -0.22
LARP4-216ENST00000550522 CNKSR2Q8WXI2 1034 aa13.67□□□□□ -0.22
LARP4-216ENST00000550522 RNF216Q9NWF9 866 aaPredicted RBP13.56□□□□□ -0.24
LARP4-216ENST00000550522 RNF39Q9H2S5 420 aa13.51□□□□□ -0.25
LARP4-216ENST00000550522 NCBP3Q53F19 620 aaKnown RBP13.31□□□□□ -0.28
LARP4-216ENST00000550522 C1QBPQ07021 282 aaKnown RBP13.28□□□□□ -0.28
LARP4-216ENST00000550522 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.18□□□□□ -0.33e-6■□□□□ 8.1
LARP4-216ENST00000550522 NPM3O75607 178 aaKnown RBP13.14□□□□□ -0.31
LARP4-216ENST00000550522 DNAJC5BQ9UF47 199 aa13.12□□□□□ -0.31
LARP4-216ENST00000550522 U3KPZ7 1027 aaPredicted RBP12.82□□□□□ -0.36
LARP4-216ENST00000550522 KCNA4P22459 653 aa12.78□□□□□ -0.36
LARP4-216ENST00000550522 CAPN15O75808 1086 aa12.75□□□□□ -0.37
LARP4-216ENST00000550522 SPINK5Q9NQ38 1064 aaPredicted RBP12.75□□□□□ -0.37
LARP4-216ENST00000550522 DSG3P32926 999 aa12.63□□□□□ -0.39
LARP4-216ENST00000550522 CCDC180Q9P1Z9 1646 aa12.62□□□□□ -0.39
LARP4-216ENST00000550522 SLC4A2P04920 1241 aa12.6□□□□□ -0.39
LARP4-216ENST00000550522 TRHP20396 242 aaPredicted RBP12.54□□□□□ -0.4
LARP4-216ENST00000550522 ABCB7O75027 752 aa12.48□□□□□ -0.41
LARP4-216ENST00000550522 POTEHQ6S545 545 aa12.37□□□□□ -0.43
LARP4-216ENST00000550522 APLP2Q06481 763 aa12.36□□□□□ -0.43
LARP4-216ENST00000550522 ZNF219Q9P2Y4 722 aaPredicted RBP12.35□□□□□ -0.43
LARP4-216ENST00000550522 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.32□□□□□ -0.44
LARP4-216ENST00000550522 HNRNPUL2Q1KMD3 747 aaKnown RBP12.32□□□□□ -0.44
LARP4-216ENST00000550522 SAMD1Q6SPF0 538 aaPredicted RBP12.26□□□□□ -0.45
LARP4-216ENST00000550522 POLA2Q14181 598 aa12.12□□□□□ -0.47
LARP4-216ENST00000550522 MYCNP04198 464 aaPredicted RBP12.11□□□□□ -0.47
LARP4-216ENST00000550522 ABCC9O60706 1549 aa12.1□□□□□ -0.47
LARP4-216ENST00000550522 SLC4A1APQ9BWU0 796 aaKnown RBP12.02□□□□□ -0.49
LARP4-216ENST00000550522 RBM42Q9BTD8 480 aaKnown RBP12□□□□□ -0.49
LARP4-216ENST00000550522 ATF5Q9Y2D1 282 aaPredicted RBP11.96□□□□□ -0.49
LARP4-216ENST00000550522 ZCCHC6Q5VYS8 1495 aaKnown RBP11.93□□□□□ -0.5
LARP4-216ENST00000550522 FOXD4L1Q9NU39 408 aa11.91□□□□□ -0.5
LARP4-216ENST00000550522 CHRDL2Q6WN34 429 aa11.87□□□□□ -0.51
LARP4-216ENST00000550522 MYO15BQ96JP2 1530 aa11.86□□□□□ -0.51
LARP4-216ENST00000550522 DCAF1Q9Y4B6 1507 aa11.86□□□□□ -0.51
LARP4-216ENST00000550522 NACADO15069 1562 aa11.82□□□□□ -0.52
LARP4-216ENST00000550522 RB1CC1Q8TDY2 1594 aa11.75□□□□□ -0.53
LARP4-216ENST00000550522 ZBTB22O15209 634 aa11.73□□□□□ -0.53
LARP4-216ENST00000550522 AKT1S1Q96B36 256 aa11.71□□□□□ -0.53
LARP4-216ENST00000550522 OSCARQ8IYS5 282 aa11.7□□□□□ -0.54
LARP4-216ENST00000550522 ZBTB12Q9Y330 459 aaPredicted RBP11.7□□□□□ -0.54
LARP4-216ENST00000550522 REM2Q8IYK8 340 aaPredicted RBP11.66□□□□□ -0.54
LARP4-216ENST00000550522 DCAF8L2P0C7V8 631 aa11.62□□□□□ -0.55
LARP4-216ENST00000550522 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
LARP4-216ENST00000550522 UNC13AQ9UPW8 1703 aa11.54□□□□□ -0.56
LARP4-216ENST00000550522 PITPNM1O00562 1244 aa11.53□□□□□ -0.56
LARP4-216ENST00000550522 SP7Q8TDD2 431 aaPredicted RBP11.5□□□□□ -0.57
LARP4-216ENST00000550522 ATXN8OSP0DMR3 200 aa11.49□□□□□ -0.57
LARP4-216ENST00000550522 HAX1O00165 279 aa11.48□□□□□ -0.57
LARP4-216ENST00000550522 BICRAQ9NZM4 1560 aa11.47□□□□□ -0.57
LARP4-216ENST00000550522 SCRIBQ14160 1630 aa11.45□□□□□ -0.58
LARP4-216ENST00000550522 FBLN2P98095 1184 aa11.44□□□□□ -0.58
LARP4-216ENST00000550522 FXR2P51116 673 aaKnown RBP eCLIP11.43□□□□□ -0.58
LARP4-216ENST00000550522 SPDYE2BA6NHP3 402 aa11.37□□□□□ -0.59
LARP4-216ENST00000550522 SPDYE6P0CI01 402 aa11.37□□□□□ -0.59
LARP4-216ENST00000550522 SPDYE2Q495Y8 402 aa11.37□□□□□ -0.59
LARP4-216ENST00000550522 CLEC11AQ9Y240 323 aa11.37□□□□□ -0.59
LARP4-216ENST00000550522 SHROOM4Q9ULL8 1493 aa11.37□□□□□ -0.59
LARP4-216ENST00000550522 MKRN4PQ13434 485 aaPredicted RBP11.34□□□□□ -0.59
LARP4-216ENST00000550522 EVX2Q03828 476 aa11.32□□□□□ -0.6
LARP4-216ENST00000550522 PABPN1Q86U42 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
LARP4-216ENST00000550522 ZNF692Q9BU19 519 aaPredicted RBP11.31□□□□□ -0.6
LARP4-216ENST00000550522 PRKAR2AP13861 404 aaKnown RBP11.27□□□□□ -0.61
LARP4-216ENST00000550522 SPDYE1Q8NFV5 336 aaPredicted RBP11.25□□□□□ -0.61
LARP4-216ENST00000550522 EHMT2Q96KQ7 1210 aa11.2□□□□□ -0.62
LARP4-216ENST00000550522 SSUH2Q9Y2M2 353 aa11.18□□□□□ -0.62
LARP4-216ENST00000550522 CHADLQ6NUI6 762 aa11.17□□□□□ -0.62
LARP4-216ENST00000550522 PRR29P0C7W0 189 aa11.1□□□□□ -0.63
LARP4-216ENST00000550522 EIF4G1Q04637 1599 aaKnown RBP11.1□□□□□ -0.63
LARP4-216ENST00000550522 CECR2Q9BXF3 1484 aa11.07□□□□□ -0.64
LARP4-216ENST00000550522 C19orf67A6NJJ6 358 aa11.07□□□□□ -0.64
LARP4-216ENST00000550522 CSRNP3Q8WYN3 585 aa11.05□□□□□ -0.64
LARP4-216ENST00000550522 GABBR2O75899 941 aa11.02□□□□□ -0.65
LARP4-216ENST00000550522 BAZ1AQ9NRL2 1556 aaPredicted RBP11.02□□□□□ -0.65
LARP4-216ENST00000550522 SMARCA4P51532 1647 aa11.02□□□□□ -0.65
LARP4-216ENST00000550522 CC2D2AQ9P2K1 1620 aa11.01□□□□□ -0.65
LARP4-216ENST00000550522 MROH2BQ7Z745 1585 aa10.99□□□□□ -0.65
LARP4-216ENST00000550522 PEG3Q9GZU2 1588 aa10.98□□□□□ -0.65
LARP4-216ENST00000550522 ATAD2BQ9ULI0 1458 aa10.93□□□□□ -0.66
LARP4-216ENST00000550522 NCAPD3P42695 1498 aa10.92□□□□□ -0.66
LARP4-216ENST00000550522 RSF1Q96T23 1441 aaPredicted RBP10.92□□□□□ -0.66
LARP4-216ENST00000550522 SMARCA2P51531 1590 aa10.9□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms