RNA–Protein interactions for RNA: ENST00000540028.5

PCSK7-215, Transcript of proprotein convertase subtilisin/kexin type 7, humanhuman

TSL 2 BASIC

Gene PCSK7, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK7-215ENST00000540028 NISCHQ9Y2I1 1504 aa25.85■■□□□ 1.73
PCSK7-215ENST00000540028 SHROOM4Q9ULL8 1493 aa22.93■■□□□ 1.26
PCSK7-215ENST00000540028 DCAF8L2P0C7V8 631 aa22.65■■□□□ 1.22
PCSK7-215ENST00000540028 SUPT5HO00267 1087 aaKnown RBP22.61■■□□□ 1.21
PCSK7-215ENST00000540028 ZCCHC6Q5VYS8 1495 aaKnown RBP21.76■■□□□ 1.07
PCSK7-215ENST00000540028 CHIC1Q5VXU3 224 aa21.57■■□□□ 1.04
PCSK7-215ENST00000540028 CCDC180Q9P1Z9 1646 aa21.54■■□□□ 1.04
PCSK7-215ENST00000540028 PCGF6Q9BYE7 350 aa21.29■■□□□ 1
PCSK7-215ENST00000540028 MYO15BQ96JP2 1530 aa21.27■■□□□ 1
PCSK7-215ENST00000540028 LOC105371045A0A1W2PR82 267 aa21.24■□□□□ 0.99
PCSK7-215ENST00000540028 EHMT2Q96KQ7 1210 aa21.13■□□□□ 0.97
PCSK7-215ENST00000540028 FAM9AQ8IZU1 332 aaPredicted RBP21.03■□□□□ 0.96
PCSK7-215ENST00000540028 HRCP23327 699 aa20.94■□□□□ 0.94
PCSK7-215ENST00000540028 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
PCSK7-215ENST00000540028 PPARGC1BQ86YN6 1023 aaKnown RBP20.85■□□□□ 0.93
PCSK7-215ENST00000540028 DCAF1Q9Y4B6 1507 aa20.84■□□□□ 0.93
PCSK7-215ENST00000540028 ABCC9O60706 1549 aa20.81■□□□□ 0.92
PCSK7-215ENST00000540028 SCRIBQ14160 1630 aa20.8■□□□□ 0.92
PCSK7-215ENST00000540028 RSF1Q96T23 1441 aaPredicted RBP20.64■□□□□ 0.89
PCSK7-215ENST00000540028 TRIM26Q12899 539 aaPredicted RBP20.56■□□□□ 0.88
PCSK7-215ENST00000540028 CECR2Q9BXF3 1484 aa20.42■□□□□ 0.86
PCSK7-215ENST00000540028 TTBK1Q5TCY1 1321 aaPredicted RBP20.39■□□□□ 0.85
PCSK7-215ENST00000540028 RB1CC1Q8TDY2 1594 aa20.36■□□□□ 0.85
PCSK7-215ENST00000540028 MROH2BQ7Z745 1585 aa20.23■□□□□ 0.83
PCSK7-215ENST00000540028 PABPN1Q86U42 306 aaKnown RBP eCLIP20.22■□□□□ 0.83
PCSK7-215ENST00000540028 NACADO15069 1562 aa20.16■□□□□ 0.82
PCSK7-215ENST00000540028 WIZO95785 1651 aa20.08■□□□□ 0.8
PCSK7-215ENST00000540028 ZEB1P37275 1124 aaPredicted RBP20.04■□□□□ 0.8
PCSK7-215ENST00000540028 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.03■□□□□ 0.8
PCSK7-215ENST00000540028 UBTFP17480 764 aaKnown RBP20.02■□□□□ 0.8
PCSK7-215ENST00000540028 CCER1Q8TC90 406 aaPredicted RBP19.99■□□□□ 0.79
PCSK7-215ENST00000540028 RANGAP1P46060 587 aaPredicted RBP19.97■□□□□ 0.79
PCSK7-215ENST00000540028 BAZ1AQ9NRL2 1556 aaPredicted RBP19.84■□□□□ 0.77
PCSK7-215ENST00000540028 ABCC8Q09428 1581 aa19.83■□□□□ 0.76
PCSK7-215ENST00000540028 CCDC88BA6NC98 1476 aa19.78■□□□□ 0.76
PCSK7-215ENST00000540028 CSRNP3Q8WYN3 585 aa19.76■□□□□ 0.75
PCSK7-215ENST00000540028 SOGA1O94964 1423 aa19.74■□□□□ 0.75
PCSK7-215ENST00000540028 HNRNPUL2Q1KMD3 747 aaKnown RBP19.64■□□□□ 0.73
PCSK7-215ENST00000540028 RUSC2Q8N2Y8 1516 aa19.62■□□□□ 0.73
PCSK7-215ENST00000540028 SMARCA4P51532 1647 aa19.61■□□□□ 0.73
PCSK7-215ENST00000540028 CEP162Q5TB80 1403 aa19.6■□□□□ 0.73
PCSK7-215ENST00000540028 TOP2AP11388 1531 aaKnown RBP19.6■□□□□ 0.73
PCSK7-215ENST00000540028 APLP2Q06481 763 aa19.59■□□□□ 0.73
PCSK7-215ENST00000540028 SMARCA2P51531 1590 aa19.53■□□□□ 0.72
PCSK7-215ENST00000540028 WRNQ14191 1432 aaPredicted RBP eCLIP19.48■□□□□ 0.71
PCSK7-215ENST00000540028 DIEXFQ68CQ4 756 aaKnown RBP19.48■□□□□ 0.71
PCSK7-215ENST00000540028 TNIKQ9UKE5 1360 aa19.46■□□□□ 0.71
PCSK7-215ENST00000540028 SCAF1Q9H7N4 1312 aaKnown RBP19.41■□□□□ 0.7
PCSK7-215ENST00000540028 UNC13AQ9UPW8 1703 aa19.38■□□□□ 0.69
PCSK7-215ENST00000540028 EIF4G1Q04637 1599 aaKnown RBP19.38■□□□□ 0.69
PCSK7-215ENST00000540028 YTHDC1Q96MU7 727 aaKnown RBP19.37■□□□□ 0.69
PCSK7-215ENST00000540028 GOLGA3Q08378 1498 aa19.34■□□□□ 0.69
PCSK7-215ENST00000540028 BAZ1BQ9UIG0 1483 aaKnown RBP19.33■□□□□ 0.68
PCSK7-215ENST00000540028 EEA1Q15075 1411 aa19.32■□□□□ 0.68
PCSK7-215ENST00000540028 CLIP1P30622 1438 aa19.3■□□□□ 0.68
PCSK7-215ENST00000540028 BICRAQ9NZM4 1560 aa19.3■□□□□ 0.68
PCSK7-215ENST00000540028 ITGAEP38570 1179 aa19.27■□□□□ 0.68
PCSK7-215ENST00000540028 NEUROD1Q13562 356 aa19.27■□□□□ 0.68
PCSK7-215ENST00000540028 ATAD2BQ9ULI0 1458 aa19.27■□□□□ 0.68
PCSK7-215ENST00000540028 CENPBP07199 599 aaPredicted RBP19.22■□□□□ 0.67
PCSK7-215ENST00000540028 CEP164Q9UPV0 1460 aa19.21■□□□□ 0.66
PCSK7-215ENST00000540028 ZNF316A6NFI3 1004 aaPredicted RBP19.2■□□□□ 0.66
PCSK7-215ENST00000540028 ACIN1Q9UKV3 1341 aaKnown RBP19.19■□□□□ 0.66
PCSK7-215ENST00000540028 ATP1B4Q9UN42 357 aaPredicted RBP19.18■□□□□ 0.66
PCSK7-215ENST00000540028 RAPGEF2Q9Y4G8 1499 aa19.18■□□□□ 0.66
PCSK7-215ENST00000540028 SYNJ1O43426 1573 aa19.17■□□□□ 0.66
PCSK7-215ENST00000540028 GTF3C3Q9Y5Q9 886 aa19.17■□□□□ 0.66
PCSK7-215ENST00000540028 KANK4Q5T7N3 995 aaPredicted RBP19.06■□□□□ 0.64
PCSK7-215ENST00000540028 VPS8Q8N3P4 1428 aa19.06■□□□□ 0.64
PCSK7-215ENST00000540028 MIER1Q8N108 512 aa19.04■□□□□ 0.64
PCSK7-215ENST00000540028 P3H3Q8IVL6 736 aa19.03■□□□□ 0.64
PCSK7-215ENST00000540028 PEG3Q9GZU2 1588 aa18.96■□□□□ 0.63
PCSK7-215ENST00000540028 KIF27Q86VH2 1401 aa18.89■□□□□ 0.62
PCSK7-215ENST00000540028 KIF21BO75037 1637 aa18.89■□□□□ 0.61
PCSK7-215ENST00000540028 FAM50AQ14320 339 aaKnown RBP18.88■□□□□ 0.61
PCSK7-215ENST00000540028 PELP1Q8IZL8 1130 aaKnown RBP18.83■□□□□ 0.6
PCSK7-215ENST00000540028 TOP2BQ02880 1626 aa18.8■□□□□ 0.6
PCSK7-215ENST00000540028 NCAPD3P42695 1498 aa18.79■□□□□ 0.6
PCSK7-215ENST00000540028 CUX2O14529 1486 aa18.78■□□□□ 0.6
PCSK7-215ENST00000540028 ARAP1Q96P48 1450 aa18.78■□□□□ 0.6
PCSK7-215ENST00000540028 CUX1P39880 1505 aa18.77■□□□□ 0.6
PCSK7-215ENST00000540028 PRXQ9BXM0 1461 aa18.76■□□□□ 0.59
PCSK7-215ENST00000540028 DHX57Q6P158 1386 aaKnown RBP18.71■□□□□ 0.59
PCSK7-215ENST00000540028 CARMIL1Q5VZK9 1371 aa18.7■□□□□ 0.58
PCSK7-215ENST00000540028 CCNB3Q8WWL7 1395 aa18.69■□□□□ 0.58
PCSK7-215ENST00000540028 IGF1RP08069 1367 aa18.68■□□□□ 0.58
PCSK7-215ENST00000540028 CFTRP13569 1480 aa18.68■□□□□ 0.58
PCSK7-215ENST00000540028 HIRIP3Q9BW71 556 aaPredicted RBP18.66■□□□□ 0.58
PCSK7-215ENST00000540028 CADPSQ9ULU8 1353 aa18.66■□□□□ 0.58
PCSK7-215ENST00000540028 SIN3AQ96ST3 1273 aa18.65■□□□□ 0.58
PCSK7-215ENST00000540028 ARHGAP35Q9NRY4 1499 aa18.63■□□□□ 0.57
PCSK7-215ENST00000540028 ERICH3Q5RHP9 1530 aa18.61■□□□□ 0.57
PCSK7-215ENST00000540028 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
PCSK7-215ENST00000540028 HMGXB3Q12766 1538 aa18.6■□□□□ 0.57
PCSK7-215ENST00000540028 BIVM-ERCC5R4GMW8 1640 aa18.58■□□□□ 0.57
PCSK7-215ENST00000540028 RAB3GAP2Q9H2M9 1393 aa18.57■□□□□ 0.56
PCSK7-215ENST00000540028 DDX10Q13206 875 aaKnown RBP18.56■□□□□ 0.56
PCSK7-215ENST00000540028 FGD5Q6ZNL6 1462 aa18.56■□□□□ 0.56
PCSK7-215ENST00000540028 CLSPNQ9HAW4 1339 aa18.56■□□□□ 0.56
PCSK7-215ENST00000540028 RAD54L2Q9Y4B4 1467 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms