RNA–Protein interactions for RNA: ENST00000526488.5

TSSC2-203, Transcript of tumor suppressing subtransferable candidate 2 pseudogene, humanhuman

TSL 3

Gene TSSC2, Length 674 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC2-203ENST00000526488 NISCHQ9Y2I1 1504 aa30.22■■■□□ 2.43
TSSC2-203ENST00000526488 AEBP2Q6ZN18 517 aaPredicted RBP27.55■■■□□ 2
TSSC2-203ENST00000526488 CCDC180Q9P1Z9 1646 aa27.09■■□□□ 1.93
TSSC2-203ENST00000526488 ABCC9O60706 1549 aa26.96■■□□□ 1.91
TSSC2-203ENST00000526488 CHIC1Q5VXU3 224 aa25.83■■□□□ 1.73
TSSC2-203ENST00000526488 RB1CC1Q8TDY2 1594 aa25.74■■□□□ 1.71
TSSC2-203ENST00000526488 NACADO15069 1562 aa25.61■■□□□ 1.69
TSSC2-203ENST00000526488 DCAF8L2P0C7V8 631 aa25.41■■□□□ 1.66
TSSC2-203ENST00000526488 MYO15BQ96JP2 1530 aa25.32■■□□□ 1.64
TSSC2-203ENST00000526488 DNAJC5BQ9UF47 199 aa25.25■■□□□ 1.63
TSSC2-203ENST00000526488 UNC13AQ9UPW8 1703 aa25.15■■□□□ 1.62
TSSC2-203ENST00000526488 PABPN1Q86U42 306 aaKnown RBP eCLIP25.11■■□□□ 1.61
TSSC2-203ENST00000526488 ZCCHC6Q5VYS8 1495 aaKnown RBP25.05■■□□□ 1.6
TSSC2-203ENST00000526488 DCAF1Q9Y4B6 1507 aa25.01■■□□□ 1.59
TSSC2-203ENST00000526488 BICRAQ9NZM4 1560 aa24.98■■□□□ 1.59
TSSC2-203ENST00000526488 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.55
TSSC2-203ENST00000526488 SCRIBQ14160 1630 aa24.62■■□□□ 1.53
TSSC2-203ENST00000526488 CC2D2AQ9P2K1 1620 aa24.39■■□□□ 1.49
TSSC2-203ENST00000526488 EIF4G1Q04637 1599 aaKnown RBP24.36■■□□□ 1.49
TSSC2-203ENST00000526488 CECR2Q9BXF3 1484 aa24.31■■□□□ 1.48
TSSC2-203ENST00000526488 NCAPD3P42695 1498 aa23.65■■□□□ 1.38
TSSC2-203ENST00000526488 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
TSSC2-203ENST00000526488 ATAD2BQ9ULI0 1458 aa23.56■■□□□ 1.36
TSSC2-203ENST00000526488 SMARCA4P51532 1647 aa23.54■■□□□ 1.36
TSSC2-203ENST00000526488 SMARCA2P51531 1590 aa23.51■■□□□ 1.35
TSSC2-203ENST00000526488 HMGXB3Q12766 1538 aa23.46■■□□□ 1.35
TSSC2-203ENST00000526488 BAZ1AQ9NRL2 1556 aaPredicted RBP23.45■■□□□ 1.34
TSSC2-203ENST00000526488 PEG3Q9GZU2 1588 aa23.35■■□□□ 1.33
TSSC2-203ENST00000526488 BAZ1BQ9UIG0 1483 aaKnown RBP23.31■■□□□ 1.32
TSSC2-203ENST00000526488 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
TSSC2-203ENST00000526488 CUX2O14529 1486 aa23.26■■□□□ 1.31
TSSC2-203ENST00000526488 MROH2BQ7Z745 1585 aa23.26■■□□□ 1.31
TSSC2-203ENST00000526488 PHF23Q9BUL5 403 aaPredicted RBP23.24■■□□□ 1.31
TSSC2-203ENST00000526488 NESP48681 1621 aa23.18■■□□□ 1.3
TSSC2-203ENST00000526488 DNAJC5Q9H3Z4 198 aa23.17■■□□□ 1.3
TSSC2-203ENST00000526488 LAMC3Q9Y6N6 1575 aa23.09■■□□□ 1.29
TSSC2-203ENST00000526488 WIZO95785 1651 aa22.97■■□□□ 1.27
TSSC2-203ENST00000526488 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
TSSC2-203ENST00000526488 PDS5BQ9NTI5 1447 aa22.95■■□□□ 1.26
TSSC2-203ENST00000526488 CADPSQ9ULU8 1353 aa22.91■■□□□ 1.26
TSSC2-203ENST00000526488 KIF21AQ7Z4S6 1674 aa22.9■■□□□ 1.26
TSSC2-203ENST00000526488 RSF1Q96T23 1441 aaPredicted RBP22.82■■□□□ 1.24
TSSC2-203ENST00000526488 MRC2Q9UBG0 1479 aa22.73■■□□□ 1.23
TSSC2-203ENST00000526488 TOP2AP11388 1531 aaKnown RBP22.71■■□□□ 1.23
TSSC2-203ENST00000526488 WDR62O43379 1518 aa22.68■■□□□ 1.22
TSSC2-203ENST00000526488 CFTRP13569 1480 aa22.67■■□□□ 1.22
TSSC2-203ENST00000526488 CEP164Q9UPV0 1460 aa22.65■■□□□ 1.22
TSSC2-203ENST00000526488 FANCD2Q9BXW9 1451 aa22.63■■□□□ 1.21
TSSC2-203ENST00000526488 CCDC88BA6NC98 1476 aa22.45■■□□□ 1.18
TSSC2-203ENST00000526488 PRDM2Q13029 1718 aa22.45■■□□□ 1.18
TSSC2-203ENST00000526488 URB2Q14146 1524 aaKnown RBP22.43■■□□□ 1.18
TSSC2-203ENST00000526488 ABCC8Q09428 1581 aa22.22■■□□□ 1.15
TSSC2-203ENST00000526488 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
TSSC2-203ENST00000526488 OSCARQ8IYS5 282 aa22.21■■□□□ 1.15
TSSC2-203ENST00000526488 IFT140Q96RY7 1462 aa22.21■■□□□ 1.15
TSSC2-203ENST00000526488 DNMBPQ6XZF7 1577 aa22.14■■□□□ 1.13
TSSC2-203ENST00000526488 ZNF608Q9ULD9 1512 aaPredicted RBP22.13■■□□□ 1.13
TSSC2-203ENST00000526488 TRIM41Q8WV44 630 aa22.11■■□□□ 1.13
TSSC2-203ENST00000526488 FOXD1Q16676 465 aa22.05■■□□□ 1.12
TSSC2-203ENST00000526488 EIF4G3O43432 1585 aaKnown RBP22.02■■□□□ 1.12
TSSC2-203ENST00000526488 TARBP1Q13395 1621 aaKnown RBP22.02■■□□□ 1.11
TSSC2-203ENST00000526488 POLA1P09884 1462 aaPredicted RBP21.99■■□□□ 1.11
TSSC2-203ENST00000526488 AQRO60306 1485 aaKnown RBP eCLIP21.95■■□□□ 1.19e-7■■■□□ 15.9
TSSC2-203ENST00000526488 SOGA1O94964 1423 aa21.9■■□□□ 1.1
TSSC2-203ENST00000526488 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
TSSC2-203ENST00000526488 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
TSSC2-203ENST00000526488 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
TSSC2-203ENST00000526488 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
TSSC2-203ENST00000526488 FGD5Q6ZNL6 1462 aa21.85■■□□□ 1.09
TSSC2-203ENST00000526488 CUX1P39880 1505 aa21.85■■□□□ 1.09
TSSC2-203ENST00000526488 WDR97A6NE52 1622 aa21.84■■□□□ 1.09
TSSC2-203ENST00000526488 CHD1O14646 1710 aa21.83■■□□□ 1.09
TSSC2-203ENST00000526488 ARHGEF11O15085 1522 aa21.82■■□□□ 1.08
TSSC2-203ENST00000526488 TDRD9Q8NDG6 1382 aaKnown RBP21.82■■□□□ 1.08
TSSC2-203ENST00000526488 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
TSSC2-203ENST00000526488 FBLN2P98095 1184 aa21.77■■□□□ 1.08
TSSC2-203ENST00000526488 SNAPC4Q5SXM2 1469 aa21.72■■□□□ 1.07
TSSC2-203ENST00000526488 GRIN2BQ13224 1484 aa21.71■■□□□ 1.07
TSSC2-203ENST00000526488 MAGI1Q96QZ7 1491 aaPredicted RBP21.71■■□□□ 1.07
TSSC2-203ENST00000526488 CYB5RLQ6IPT4 315 aa21.66■■□□□ 1.06
TSSC2-203ENST00000526488 CHMP7Q8WUX9 453 aaPredicted RBP21.65■■□□□ 1.06
TSSC2-203ENST00000526488 ABCA10Q8WWZ4 1543 aa21.64■■□□□ 1.05
TSSC2-203ENST00000526488 SYNJ2O15056 1496 aa21.63■■□□□ 1.05
TSSC2-203ENST00000526488 GAPVD1Q14C86 1478 aa21.63■■□□□ 1.05
TSSC2-203ENST00000526488 CLASP1Q7Z460 1538 aa21.61■■□□□ 1.05
TSSC2-203ENST00000526488 ARAP1Q96P48 1450 aa21.61■■□□□ 1.05
TSSC2-203ENST00000526488 SYNJ1O43426 1573 aa21.61■■□□□ 1.05
TSSC2-203ENST00000526488 PBRM1Q86U86 1689 aa21.6■■□□□ 1.05
TSSC2-203ENST00000526488 ABCA5Q8WWZ7 1642 aa21.58■■□□□ 1.05
TSSC2-203ENST00000526488 WRNQ14191 1432 aaPredicted RBP eCLIP21.56■■□□□ 1.04
TSSC2-203ENST00000526488 BIVM-ERCC5R4GMW8 1640 aa21.54■■□□□ 1.04
TSSC2-203ENST00000526488 TOP2BQ02880 1626 aa21.53■■□□□ 1.04
TSSC2-203ENST00000526488 GRIN2AQ12879 1464 aa21.42■■□□□ 1.02
TSSC2-203ENST00000526488 ADAMTS12P58397 1594 aa21.4■■□□□ 1.02
TSSC2-203ENST00000526488 TRHP20396 242 aaPredicted RBP21.37■■□□□ 1.01
TSSC2-203ENST00000526488 ERICH3Q5RHP9 1530 aa21.37■■□□□ 1.01
TSSC2-203ENST00000526488 FHAD1B1AJZ9 1412 aa21.37■■□□□ 1.01
TSSC2-203ENST00000526488 NUP160Q12769 1436 aa21.36■■□□□ 1.01
TSSC2-203ENST00000526488 CEP170Q5SW79 1584 aa21.32■■□□□ 1
TSSC2-203ENST00000526488 SHROOM2Q13796 1616 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms