RNA–Protein interactions for RNA: ENST00000398473.6

LARP4-203, Transcript of La ribonucleoprotein domain family member 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LARP4, Length 6,427 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-203ENST00000398473 NISCHQ9Y2I1 1504 aa11.55□□□□□ -0.56
LARP4-203ENST00000398473 DCAF8L2P0C7V8 631 aa10.49□□□□□ -0.73
LARP4-203ENST00000398473 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
LARP4-203ENST00000398473 RB1CC1Q8TDY2 1594 aa9.86□□□□□ -0.83
LARP4-203ENST00000398473 FAM9AQ8IZU1 332 aaPredicted RBP9.85□□□□□ -0.83
LARP4-203ENST00000398473 ABCC9O60706 1549 aa9.84□□□□□ -0.83
LARP4-203ENST00000398473 NACADO15069 1562 aa9.77□□□□□ -0.85
LARP4-203ENST00000398473 SHROOM4Q9ULL8 1493 aa9.73□□□□□ -0.85
LARP4-203ENST00000398473 ZCCHC6Q5VYS8 1495 aaKnown RBP9.63□□□□□ -0.87
LARP4-203ENST00000398473 SUPT5HO00267 1087 aaKnown RBP9.57□□□□□ -0.88
LARP4-203ENST00000398473 DCAF1Q9Y4B6 1507 aa9.57□□□□□ -0.88
LARP4-203ENST00000398473 SCRIBQ14160 1630 aa9.54□□□□□ -0.88
LARP4-203ENST00000398473 MYO15BQ96JP2 1530 aa9.48□□□□□ -0.89
LARP4-203ENST00000398473 APLP2Q06481 763 aa9.37□□□□□ -0.91
LARP4-203ENST00000398473 PABPN1Q86U42 306 aaKnown RBP eCLIP9.31□□□□□ -0.92
LARP4-203ENST00000398473 SMARCA2P51531 1590 aa9.22□□□□□ -0.93
LARP4-203ENST00000398473 TRIM41Q8WV44 630 aa9.2□□□□□ -0.94
LARP4-203ENST00000398473 BAZ1AQ9NRL2 1556 aaPredicted RBP9.2□□□□□ -0.94
LARP4-203ENST00000398473 BAZ1BQ9UIG0 1483 aaKnown RBP9.15□□□□□ -0.94
LARP4-203ENST00000398473 CHIC1Q5VXU3 224 aa9.13□□□□□ -0.95
LARP4-203ENST00000398473 ERCC6Q03468 1493 aa9.07□□□□□ -0.96
LARP4-203ENST00000398473 UBTFP17480 764 aaKnown RBP9.01□□□□□ -0.97
LARP4-203ENST00000398473 LOC105371045A0A1W2PR82 267 aa9.01□□□□□ -0.97
LARP4-203ENST00000398473 PPARGC1BQ86YN6 1023 aaKnown RBP9.01□□□□□ -0.97
LARP4-203ENST00000398473 SMARCA4P51532 1647 aa8.99□□□□□ -0.97
LARP4-203ENST00000398473 TOP2AP11388 1531 aaKnown RBP8.97□□□□□ -0.97
LARP4-203ENST00000398473 ATP1B4Q9UN42 357 aaPredicted RBP8.96□□□□□ -0.97
LARP4-203ENST00000398473 PDS5BQ9NTI5 1447 aa8.95□□□□□ -0.98
LARP4-203ENST00000398473 PCGF6Q9BYE7 350 aa8.93□□□□□ -0.98
LARP4-203ENST00000398473 ABCC8Q09428 1581 aa8.92□□□□□ -0.98
LARP4-203ENST00000398473 CECR2Q9BXF3 1484 aa8.91□□□□□ -0.98
LARP4-203ENST00000398473 HRCP23327 699 aa8.9□□□□□ -0.98
LARP4-203ENST00000398473 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.86□□□□□ -0.99
LARP4-203ENST00000398473 HNRNPUL2Q1KMD3 747 aaKnown RBP8.86□□□□□ -0.99
LARP4-203ENST00000398473 UNC13AQ9UPW8 1703 aa8.85□□□□□ -0.99
LARP4-203ENST00000398473 EIF4G1Q04637 1599 aaKnown RBP8.85□□□□□ -0.99
LARP4-203ENST00000398473 EEA1Q15075 1411 aa8.85□□□□□ -0.99
LARP4-203ENST00000398473 MYT1LQ9UL68 1186 aa8.85□□□□□ -0.99
LARP4-203ENST00000398473 EHMT2Q96KQ7 1210 aa8.85□□□□□ -0.99
LARP4-203ENST00000398473 HMGXB3Q12766 1538 aa8.84□□□□□ -0.99
LARP4-203ENST00000398473 RSF1Q96T23 1441 aaPredicted RBP8.84□□□□□ -0.99
LARP4-203ENST00000398473 CEP164Q9UPV0 1460 aa8.82□□□□□ -1
LARP4-203ENST00000398473 NPM1P06748 294 aaKnown RBP eCLIP8.82□□□□□ -1
LARP4-203ENST00000398473 CC2D2AQ9P2K1 1620 aa8.81□□□□□ -1
LARP4-203ENST00000398473 RANGAP1P46060 587 aaPredicted RBP8.8□□□□□ -1
LARP4-203ENST00000398473 FBLN2P98095 1184 aa8.8□□□□□ -1
LARP4-203ENST00000398473 CDK11AQ9UQ88 783 aaPredicted RBP8.79□□□□□ -1
LARP4-203ENST00000398473 ATAD2BQ9ULI0 1458 aa8.77□□□□□ -1
LARP4-203ENST00000398473 WIZO95785 1651 aa8.77□□□□□ -1.01
LARP4-203ENST00000398473 ZEB1P37275 1124 aaPredicted RBP8.77□□□□□ -1.01
LARP4-203ENST00000398473 ACIN1Q9UKV3 1341 aaKnown RBP8.75□□□□□ -1.01
LARP4-203ENST00000398473 WRNQ14191 1432 aaPredicted RBP eCLIP8.75□□□□□ -1.01
LARP4-203ENST00000398473 KIF27Q86VH2 1401 aa8.75□□□□□ -1.01
LARP4-203ENST00000398473 CHMP7Q8WUX9 453 aaPredicted RBP8.74□□□□□ -1.01
LARP4-203ENST00000398473 MROH2BQ7Z745 1585 aa8.74□□□□□ -1.01
LARP4-203ENST00000398473 NCAPD3P42695 1498 aa8.73□□□□□ -1.01
LARP4-203ENST00000398473 LAMC3Q9Y6N6 1575 aa8.72□□□□□ -1.01
LARP4-203ENST00000398473 TTBK1Q5TCY1 1321 aaPredicted RBP8.71□□□□□ -1.01
LARP4-203ENST00000398473 CCDC88BA6NC98 1476 aa8.69□□□□□ -1.02
LARP4-203ENST00000398473 CADPSQ9ULU8 1353 aa8.69□□□□□ -1.02
LARP4-203ENST00000398473 MRC2Q9UBG0 1479 aa8.68□□□□□ -1.02
LARP4-203ENST00000398473 PRDM2Q13029 1718 aa8.68□□□□□ -1.02
LARP4-203ENST00000398473 GOLGA3Q08378 1498 aa8.68□□□□□ -1.02
LARP4-203ENST00000398473 BICRAQ9NZM4 1560 aa8.66□□□□□ -1.02
LARP4-203ENST00000398473 FANCD2Q9BXW9 1451 aa8.66□□□□□ -1.02
LARP4-203ENST00000398473 CARMIL2Q6F5E8 1435 aa8.64□□□□□ -1.03
LARP4-203ENST00000398473 CSRNP3Q8WYN3 585 aa8.64□□□□□ -1.03
LARP4-203ENST00000398473 ESF1Q9H501 851 aaKnown RBP8.62□□□□□ -1.03
LARP4-203ENST00000398473 PEG3Q9GZU2 1588 aa8.62□□□□□ -1.03
LARP4-203ENST00000398473 CLIP1P30622 1438 aa8.61□□□□□ -1.03
LARP4-203ENST00000398473 IFT140Q96RY7 1462 aa8.6□□□□□ -1.03
LARP4-203ENST00000398473 SOGA1O94964 1423 aa8.6□□□□□ -1.03
LARP4-203ENST00000398473 PELP1Q8IZL8 1130 aaKnown RBP8.59□□□□□ -1.03
LARP4-203ENST00000398473 DNMBPQ6XZF7 1577 aa8.57□□□□□ -1.04
LARP4-203ENST00000398473 CUX2O14529 1486 aa8.57□□□□□ -1.04
LARP4-203ENST00000398473 WDR97A6NE52 1622 aa8.56□□□□□ -1.04
LARP4-203ENST00000398473 TRIM26Q12899 539 aaPredicted RBP8.55□□□□□ -1.04
LARP4-203ENST00000398473 FHAD1B1AJZ9 1412 aa8.55□□□□□ -1.04
LARP4-203ENST00000398473 CUL7Q14999 1698 aa8.53□□□□□ -1.04
LARP4-203ENST00000398473 FAM50AQ14320 339 aaKnown RBP8.52□□□□□ -1.05
LARP4-203ENST00000398473 CCER1Q8TC90 406 aaPredicted RBP8.52□□□□□ -1.05
LARP4-203ENST00000398473 CFTRP13569 1480 aa8.49□□□□□ -1.05
LARP4-203ENST00000398473 RAPGEF2Q9Y4G8 1499 aa8.49□□□□□ -1.05
LARP4-203ENST00000398473 CARMIL1Q5VZK9 1371 aa8.48□□□□□ -1.05
LARP4-203ENST00000398473 GRIN2BQ13224 1484 aa8.47□□□□□ -1.05
LARP4-203ENST00000398473 PLEKHD1A6NEE1 506 aa8.46□□□□□ -1.05
LARP4-203ENST00000398473 RUSC2Q8N2Y8 1516 aa8.46□□□□□ -1.05
LARP4-203ENST00000398473 TOP2BQ02880 1626 aa8.46□□□□□ -1.05
LARP4-203ENST00000398473 TRIM52Q96A61 297 aa8.46□□□□□ -1.06
LARP4-203ENST00000398473 SYNJ1O43426 1573 aa8.45□□□□□ -1.06
LARP4-203ENST00000398473 CEP162Q5TB80 1403 aa8.45□□□□□ -1.06
LARP4-203ENST00000398473 GAPVD1Q14C86 1478 aa8.45□□□□□ -1.06
LARP4-203ENST00000398473 MTUS2Q5JR59 1369 aa8.45□□□□□ -1.06
LARP4-203ENST00000398473 FMN1Q68DA7 1419 aa8.45□□□□□ -1.06
LARP4-203ENST00000398473 FGD5Q6ZNL6 1462 aa8.44□□□□□ -1.06
LARP4-203ENST00000398473 TNIKQ9UKE5 1360 aa8.44□□□□□ -1.06
LARP4-203ENST00000398473 CCDC18Q5T9S5 1454 aa8.43□□□□□ -1.06
LARP4-203ENST00000398473 BIVM-ERCC5R4GMW8 1640 aa8.42□□□□□ -1.06
LARP4-203ENST00000398473 SCAF1Q9H7N4 1312 aaKnown RBP8.41□□□□□ -1.06
LARP4-203ENST00000398473 KANK1Q14678 1352 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms