RNA–Protein interactions for RNA: ENST00000522041.5

TOP1MT-214, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 906 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-214ENST00000522041 NISCHQ9Y2I1 1504 aa25.57■■□□□ 1.68
TOP1MT-214ENST00000522041 CCDC180Q9P1Z9 1646 aa22.79■■□□□ 1.24
TOP1MT-214ENST00000522041 ABCC9O60706 1549 aa22.7■■□□□ 1.22
TOP1MT-214ENST00000522041 RB1CC1Q8TDY2 1594 aa21.62■■□□□ 1.05
TOP1MT-214ENST00000522041 DCAF8L2P0C7V8 631 aa21.54■■□□□ 1.04
TOP1MT-214ENST00000522041 NACADO15069 1562 aa21.53■■□□□ 1.04
TOP1MT-214ENST00000522041 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
TOP1MT-214ENST00000522041 ZCCHC6Q5VYS8 1495 aaKnown RBP21.21■□□□□ 0.99
TOP1MT-214ENST00000522041 PABPN1Q86U42 306 aaKnown RBP eCLIP21.21■□□□□ 0.99
TOP1MT-214ENST00000522041 DNAJC5BQ9UF47 199 aa21.21■□□□□ 0.99
TOP1MT-214ENST00000522041 UNC13AQ9UPW8 1703 aa21.16■□□□□ 0.98
TOP1MT-214ENST00000522041 DCAF1Q9Y4B6 1507 aa21.09■□□□□ 0.97
TOP1MT-214ENST00000522041 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
TOP1MT-214ENST00000522041 SCRIBQ14160 1630 aa20.84■□□□□ 0.93
TOP1MT-214ENST00000522041 SHROOM4Q9ULL8 1493 aa20.68■□□□□ 0.9
TOP1MT-214ENST00000522041 CC2D2AQ9P2K1 1620 aa20.49■□□□□ 0.87
TOP1MT-214ENST00000522041 EIF4G1Q04637 1599 aaKnown RBP20.49■□□□□ 0.87
TOP1MT-214ENST00000522041 CECR2Q9BXF3 1484 aa20.41■□□□□ 0.86
TOP1MT-214ENST00000522041 NCAPD3P42695 1498 aa19.91■□□□□ 0.78
TOP1MT-214ENST00000522041 SMARCA4P51532 1647 aa19.88■□□□□ 0.77
TOP1MT-214ENST00000522041 ATAD2BQ9ULI0 1458 aa19.88■□□□□ 0.77
TOP1MT-214ENST00000522041 SMARCA2P51531 1590 aa19.78■□□□□ 0.76
TOP1MT-214ENST00000522041 BAZ1AQ9NRL2 1556 aaPredicted RBP19.78■□□□□ 0.76
TOP1MT-214ENST00000522041 HMGXB3Q12766 1538 aa19.74■□□□□ 0.75
TOP1MT-214ENST00000522041 MROH2BQ7Z745 1585 aa19.73■□□□□ 0.75
TOP1MT-214ENST00000522041 PEG3Q9GZU2 1588 aa19.67■□□□□ 0.74
TOP1MT-214ENST00000522041 BAZ1BQ9UIG0 1483 aaKnown RBP19.67■□□□□ 0.74
TOP1MT-214ENST00000522041 NESP48681 1621 aa19.58■□□□□ 0.72
TOP1MT-214ENST00000522041 ERCC6Q03468 1493 aa19.54■□□□□ 0.72
TOP1MT-214ENST00000522041 WIZO95785 1651 aa19.49■□□□□ 0.71
TOP1MT-214ENST00000522041 CUX2O14529 1486 aa19.43■□□□□ 0.7
TOP1MT-214ENST00000522041 RSF1Q96T23 1441 aaPredicted RBP19.39■□□□□ 0.69
TOP1MT-214ENST00000522041 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.69
TOP1MT-214ENST00000522041 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
TOP1MT-214ENST00000522041 THOC2Q8NI27 1593 aaKnown RBP19.29■□□□□ 0.68
TOP1MT-214ENST00000522041 PDS5BQ9NTI5 1447 aa19.29■□□□□ 0.68
TOP1MT-214ENST00000522041 DNAJC5Q9H3Z4 198 aa19.28■□□□□ 0.68
TOP1MT-214ENST00000522041 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.68
TOP1MT-214ENST00000522041 TOP2AP11388 1531 aaKnown RBP19.22■□□□□ 0.67
TOP1MT-214ENST00000522041 CFTRP13569 1480 aa19.13■□□□□ 0.65
TOP1MT-214ENST00000522041 MRC2Q9UBG0 1479 aa19.12■□□□□ 0.65
TOP1MT-214ENST00000522041 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
TOP1MT-214ENST00000522041 CEP164Q9UPV0 1460 aa19.07■□□□□ 0.64
TOP1MT-214ENST00000522041 WDR62O43379 1518 aa19.06■□□□□ 0.64
TOP1MT-214ENST00000522041 CCDC88BA6NC98 1476 aa19.04■□□□□ 0.64
TOP1MT-214ENST00000522041 URB2Q14146 1524 aaKnown RBP18.94■□□□□ 0.62
TOP1MT-214ENST00000522041 PRDM2Q13029 1718 aa18.88■□□□□ 0.61
TOP1MT-214ENST00000522041 TOPBP1Q92547 1522 aa18.75■□□□□ 0.59
TOP1MT-214ENST00000522041 SUPT5HO00267 1087 aaKnown RBP18.71■□□□□ 0.59
TOP1MT-214ENST00000522041 IFT140Q96RY7 1462 aa18.69■□□□□ 0.58
TOP1MT-214ENST00000522041 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
TOP1MT-214ENST00000522041 ABCC8Q09428 1581 aa18.68■□□□□ 0.58
TOP1MT-214ENST00000522041 DNMBPQ6XZF7 1577 aa18.68■□□□□ 0.58
TOP1MT-214ENST00000522041 OSCARQ8IYS5 282 aa18.62■□□□□ 0.57
TOP1MT-214ENST00000522041 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.56
TOP1MT-214ENST00000522041 TARBP1Q13395 1621 aaKnown RBP18.56■□□□□ 0.56
TOP1MT-214ENST00000522041 AQRO60306 1485 aaKnown RBP eCLIP18.54■□□□□ 0.56
TOP1MT-214ENST00000522041 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
TOP1MT-214ENST00000522041 EIF4G3O43432 1585 aaKnown RBP18.54■□□□□ 0.56
TOP1MT-214ENST00000522041 TRIM41Q8WV44 630 aa18.52■□□□□ 0.56
TOP1MT-214ENST00000522041 CUX1P39880 1505 aa18.52■□□□□ 0.56
TOP1MT-214ENST00000522041 SOGA1O94964 1423 aa18.5■□□□□ 0.55
TOP1MT-214ENST00000522041 CHIC1Q5VXU3 224 aa18.5■□□□□ 0.55
TOP1MT-214ENST00000522041 FGD5Q6ZNL6 1462 aa18.48■□□□□ 0.55
TOP1MT-214ENST00000522041 TDRD9Q8NDG6 1382 aaKnown RBP18.46■□□□□ 0.55
TOP1MT-214ENST00000522041 FBLN2P98095 1184 aa18.37■□□□□ 0.53
TOP1MT-214ENST00000522041 CHD1O14646 1710 aa18.37■□□□□ 0.53
TOP1MT-214ENST00000522041 AEBP2Q6ZN18 517 aaPredicted RBP18.36■□□□□ 0.53
TOP1MT-214ENST00000522041 RIMBP3CA6NJZ7 1639 aa18.34■□□□□ 0.53
TOP1MT-214ENST00000522041 RIMBP3BA6NNM3 1639 aa18.34■□□□□ 0.53
TOP1MT-214ENST00000522041 RIMBP3Q9UFD9 1639 aa18.34■□□□□ 0.53
TOP1MT-214ENST00000522041 SNAPC4Q5SXM2 1469 aa18.33■□□□□ 0.53
TOP1MT-214ENST00000522041 WDR97A6NE52 1622 aa18.32■□□□□ 0.52
TOP1MT-214ENST00000522041 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
TOP1MT-214ENST00000522041 GRIN2BQ13224 1484 aa18.29■□□□□ 0.52
TOP1MT-214ENST00000522041 ABCA10Q8WWZ4 1543 aa18.28■□□□□ 0.52
TOP1MT-214ENST00000522041 GAPVD1Q14C86 1478 aa18.26■□□□□ 0.51
TOP1MT-214ENST00000522041 CHMP7Q8WUX9 453 aaPredicted RBP18.26■□□□□ 0.51
TOP1MT-214ENST00000522041 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
TOP1MT-214ENST00000522041 WRNQ14191 1432 aaPredicted RBP eCLIP18.25■□□□□ 0.51
TOP1MT-214ENST00000522041 SYNJ1O43426 1573 aa18.24■□□□□ 0.51
TOP1MT-214ENST00000522041 TOP2BQ02880 1626 aa18.23■□□□□ 0.51
TOP1MT-214ENST00000522041 BIVM-ERCC5R4GMW8 1640 aa18.23■□□□□ 0.51
TOP1MT-214ENST00000522041 ABCA5Q8WWZ7 1642 aa18.22■□□□□ 0.51
TOP1MT-214ENST00000522041 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
TOP1MT-214ENST00000522041 SYNJ2O15056 1496 aa18.21■□□□□ 0.51
TOP1MT-214ENST00000522041 CYB5RLQ6IPT4 315 aa18.2■□□□□ 0.5
TOP1MT-214ENST00000522041 CLASP1Q7Z460 1538 aa18.18■□□□□ 0.5
TOP1MT-214ENST00000522041 ARAP1Q96P48 1450 aa18.16■□□□□ 0.5
TOP1MT-214ENST00000522041 ADAMTS12P58397 1594 aa18.07■□□□□ 0.48
TOP1MT-214ENST00000522041 GRIN2AQ12879 1464 aa18.06■□□□□ 0.48
TOP1MT-214ENST00000522041 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
TOP1MT-214ENST00000522041 ERICH3Q5RHP9 1530 aa18.03■□□□□ 0.48
TOP1MT-214ENST00000522041 NUP160Q12769 1436 aa18.01■□□□□ 0.47
TOP1MT-214ENST00000522041 CEP170Q5SW79 1584 aa18■□□□□ 0.47
TOP1MT-214ENST00000522041 ERCC6L2Q5T890 1561 aa17.96■□□□□ 0.47
TOP1MT-214ENST00000522041 TRHP20396 242 aaPredicted RBP17.92■□□□□ 0.46
TOP1MT-214ENST00000522041 IGF1RP08069 1367 aa17.91■□□□□ 0.46
TOP1MT-214ENST00000522041 KIF27Q86VH2 1401 aa17.89■□□□□ 0.45
TOP1MT-214ENST00000522041 SHROOM2Q13796 1616 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 385 ms