RNA–Protein interactions for RNA: ENST00000580745.5

PPP4R1-218, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-218ENST00000580745 NISCHQ9Y2I1 1504 aa27.66■■■□□ 2.02
PPP4R1-218ENST00000580745 ABCC9O60706 1549 aa24.73■■□□□ 1.55
PPP4R1-218ENST00000580745 CCDC180Q9P1Z9 1646 aa24.58■■□□□ 1.53
PPP4R1-218ENST00000580745 DCAF8L2P0C7V8 631 aa23.47■■□□□ 1.35
PPP4R1-218ENST00000580745 RB1CC1Q8TDY2 1594 aa23.44■■□□□ 1.34
PPP4R1-218ENST00000580745 NACADO15069 1562 aa23.31■■□□□ 1.32
PPP4R1-218ENST00000580745 DNAJC5BQ9UF47 199 aa23.2■■□□□ 1.3
PPP4R1-218ENST00000580745 PABPN1Q86U42 306 aaKnown RBP eCLIP23.14■■□□□ 1.29
PPP4R1-218ENST00000580745 MYO15BQ96JP2 1530 aa22.99■■□□□ 1.27
PPP4R1-218ENST00000580745 ZCCHC6Q5VYS8 1495 aaKnown RBP22.94■■□□□ 1.26
PPP4R1-218ENST00000580745 BICRAQ9NZM4 1560 aa22.81■■□□□ 1.24
PPP4R1-218ENST00000580745 UNC13AQ9UPW8 1703 aa22.79■■□□□ 1.24
PPP4R1-218ENST00000580745 DCAF1Q9Y4B6 1507 aa22.77■■□□□ 1.24
PPP4R1-218ENST00000580745 SCRIBQ14160 1630 aa22.58■■□□□ 1.21
PPP4R1-218ENST00000580745 SHROOM4Q9ULL8 1493 aa22.4■■□□□ 1.18
PPP4R1-218ENST00000580745 CC2D2AQ9P2K1 1620 aa22.24■■□□□ 1.15
PPP4R1-218ENST00000580745 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
PPP4R1-218ENST00000580745 CECR2Q9BXF3 1484 aa22.22■■□□□ 1.15
PPP4R1-218ENST00000580745 NCAPD3P42695 1498 aa21.59■■□□□ 1.05
PPP4R1-218ENST00000580745 ATAD2BQ9ULI0 1458 aa21.58■■□□□ 1.04
PPP4R1-218ENST00000580745 SMARCA4P51532 1647 aa21.5■■□□□ 1.03
PPP4R1-218ENST00000580745 SMARCA2P51531 1590 aa21.42■■□□□ 1.02
PPP4R1-218ENST00000580745 BAZ1AQ9NRL2 1556 aaPredicted RBP21.4■■□□□ 1.02
PPP4R1-218ENST00000580745 HMGXB3Q12766 1538 aa21.37■■□□□ 1.01
PPP4R1-218ENST00000580745 MROH2BQ7Z745 1585 aa21.36■■□□□ 1.01
PPP4R1-218ENST00000580745 BAZ1BQ9UIG0 1483 aaKnown RBP21.34■■□□□ 1.01
PPP4R1-218ENST00000580745 ERCC6Q03468 1493 aa21.29■■□□□ 1
PPP4R1-218ENST00000580745 NESP48681 1621 aa21.29■■□□□ 1
PPP4R1-218ENST00000580745 PEG3Q9GZU2 1588 aa21.25■□□□□ 0.99
PPP4R1-218ENST00000580745 CUX2O14529 1486 aa21.14■□□□□ 0.98
PPP4R1-218ENST00000580745 DNAJC5Q9H3Z4 198 aa21.11■□□□□ 0.97
PPP4R1-218ENST00000580745 WIZO95785 1651 aa21.05■□□□□ 0.96
PPP4R1-218ENST00000580745 LAMC3Q9Y6N6 1575 aa20.99■□□□□ 0.95
PPP4R1-218ENST00000580745 RSF1Q96T23 1441 aaPredicted RBP20.98■□□□□ 0.95
PPP4R1-218ENST00000580745 CADPSQ9ULU8 1353 aa20.97■□□□□ 0.95
PPP4R1-218ENST00000580745 PDS5BQ9NTI5 1447 aa20.95■□□□□ 0.94
PPP4R1-218ENST00000580745 THOC2Q8NI27 1593 aaKnown RBP20.92■□□□□ 0.94
PPP4R1-218ENST00000580745 KIF21AQ7Z4S6 1674 aa20.85■□□□□ 0.93
PPP4R1-218ENST00000580745 TOP2AP11388 1531 aaKnown RBP20.78■□□□□ 0.92
PPP4R1-218ENST00000580745 MRC2Q9UBG0 1479 aa20.77■□□□□ 0.92
PPP4R1-218ENST00000580745 CFTRP13569 1480 aa20.74■□□□□ 0.91
PPP4R1-218ENST00000580745 FANCD2Q9BXW9 1451 aa20.73■□□□□ 0.91
PPP4R1-218ENST00000580745 CEP164Q9UPV0 1460 aa20.7■□□□□ 0.9
PPP4R1-218ENST00000580745 WDR62O43379 1518 aa20.68■□□□□ 0.9
PPP4R1-218ENST00000580745 CCDC88BA6NC98 1476 aa20.62■□□□□ 0.89
PPP4R1-218ENST00000580745 URB2Q14146 1524 aaKnown RBP20.56■□□□□ 0.88
PPP4R1-218ENST00000580745 TOPBP1Q92547 1522 aa20.33■□□□□ 0.85
PPP4R1-218ENST00000580745 ZNF608Q9ULD9 1512 aaPredicted RBP20.32■□□□□ 0.84
PPP4R1-218ENST00000580745 TRIM41Q8WV44 630 aa20.32■□□□□ 0.84
PPP4R1-218ENST00000580745 OSCARQ8IYS5 282 aa20.3■□□□□ 0.84
PPP4R1-218ENST00000580745 IFT140Q96RY7 1462 aa20.29■□□□□ 0.84
PPP4R1-218ENST00000580745 PRDM2Q13029 1718 aa20.27■□□□□ 0.83
PPP4R1-218ENST00000580745 SUPT5HO00267 1087 aaKnown RBP20.25■□□□□ 0.83
PPP4R1-218ENST00000580745 DNMBPQ6XZF7 1577 aa20.21■□□□□ 0.83
PPP4R1-218ENST00000580745 ABCC8Q09428 1581 aa20.21■□□□□ 0.83
PPP4R1-218ENST00000580745 AQRO60306 1485 aaKnown RBP eCLIP20.17■□□□□ 0.827e-12■■□□□ 13.1
PPP4R1-218ENST00000580745 POLA1P09884 1462 aaPredicted RBP20.15■□□□□ 0.82
PPP4R1-218ENST00000580745 RAD54L2Q9Y4B4 1467 aa20.14■□□□□ 0.81
PPP4R1-218ENST00000580745 EIF4G3O43432 1585 aaKnown RBP20.09■□□□□ 0.81
PPP4R1-218ENST00000580745 TARBP1Q13395 1621 aaKnown RBP20.09■□□□□ 0.81
PPP4R1-218ENST00000580745 TDRD9Q8NDG6 1382 aaKnown RBP20.08■□□□□ 0.81
PPP4R1-218ENST00000580745 SOGA1O94964 1423 aa20.08■□□□□ 0.8
PPP4R1-218ENST00000580745 CUX1P39880 1505 aa20.05■□□□□ 0.8
PPP4R1-218ENST00000580745 FGD5Q6ZNL6 1462 aa20.05■□□□□ 0.8
PPP4R1-218ENST00000580745 FBLN2P98095 1184 aa20.04■□□□□ 0.8
PPP4R1-218ENST00000580745 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
PPP4R1-218ENST00000580745 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
PPP4R1-218ENST00000580745 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
PPP4R1-218ENST00000580745 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
PPP4R1-218ENST00000580745 SNAPC4Q5SXM2 1469 aa19.92■□□□□ 0.78
PPP4R1-218ENST00000580745 CYB5RLQ6IPT4 315 aa19.88■□□□□ 0.77
PPP4R1-218ENST00000580745 CHMP7Q8WUX9 453 aaPredicted RBP19.87■□□□□ 0.77
PPP4R1-218ENST00000580745 CHD1O14646 1710 aa19.86■□□□□ 0.77
PPP4R1-218ENST00000580745 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
PPP4R1-218ENST00000580745 GAPVD1Q14C86 1478 aa19.81■□□□□ 0.76
PPP4R1-218ENST00000580745 MAGI1Q96QZ7 1491 aaPredicted RBP19.79■□□□□ 0.76
PPP4R1-218ENST00000580745 ABCA10Q8WWZ4 1543 aa19.79■□□□□ 0.76
PPP4R1-218ENST00000580745 WDR97A6NE52 1622 aa19.78■□□□□ 0.76
PPP4R1-218ENST00000580745 ARAP1Q96P48 1450 aa19.78■□□□□ 0.76
PPP4R1-218ENST00000580745 WRNQ14191 1432 aaPredicted RBP eCLIP19.76■□□□□ 0.75
PPP4R1-218ENST00000580745 SYNJ2O15056 1496 aa19.76■□□□□ 0.75
PPP4R1-218ENST00000580745 CLASP1Q7Z460 1538 aa19.72■□□□□ 0.75
PPP4R1-218ENST00000580745 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
PPP4R1-218ENST00000580745 ABCA5Q8WWZ7 1642 aa19.69■□□□□ 0.74
PPP4R1-218ENST00000580745 TOP2BQ02880 1626 aa19.68■□□□□ 0.74
PPP4R1-218ENST00000580745 PBRM1Q86U86 1689 aa19.65■□□□□ 0.74
PPP4R1-218ENST00000580745 BIVM-ERCC5R4GMW8 1640 aa19.63■□□□□ 0.73
PPP4R1-218ENST00000580745 TRHP20396 242 aaPredicted RBP19.61■□□□□ 0.73
PPP4R1-218ENST00000580745 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
PPP4R1-218ENST00000580745 FHAD1B1AJZ9 1412 aa19.56■□□□□ 0.72
PPP4R1-218ENST00000580745 ADAMTS12P58397 1594 aa19.56■□□□□ 0.72
PPP4R1-218ENST00000580745 NUP160Q12769 1436 aa19.54■□□□□ 0.72
PPP4R1-218ENST00000580745 CEP170Q5SW79 1584 aa19.52■□□□□ 0.71
PPP4R1-218ENST00000580745 ERCC6L2Q5T890 1561 aa19.51■□□□□ 0.71
PPP4R1-218ENST00000580745 ERICH3Q5RHP9 1530 aa19.5■□□□□ 0.71
PPP4R1-218ENST00000580745 IGF1RP08069 1367 aa19.41■□□□□ 0.7
PPP4R1-218ENST00000580745 JPH4Q96JJ6 628 aa19.4■□□□□ 0.7
PPP4R1-218ENST00000580745 PRG4Q92954 1404 aaPredicted RBP19.38■□□□□ 0.69
PPP4R1-218ENST00000580745 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
PPP4R1-218ENST00000580745 SHROOM2Q13796 1616 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms