RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 AEBP2Q6ZN18 517 aaPredicted RBP12.6□□□□□ -0.39
FDFT1-216ENST00000529521 CHIC1Q5VXU3 224 aa11.71□□□□□ -0.53
FDFT1-216ENST00000529521 SENP3Q9H4L4 574 aaPredicted RBP10.75□□□□□ -0.69
FDFT1-216ENST00000529521 PHF23Q9BUL5 403 aaPredicted RBP10.58□□□□□ -0.72
FDFT1-216ENST00000529521 FOXD1Q16676 465 aa10.09□□□□□ -0.79
FDFT1-216ENST00000529521 POTEDQ86YR6 584 aa9.86□□□□□ -0.83
FDFT1-216ENST00000529521 MSH5O43196 834 aa9.51□□□□□ -0.89
FDFT1-216ENST00000529521 PIAS4Q8N2W9 510 aaPredicted RBP9.33□□□□□ -0.92
FDFT1-216ENST00000529521 PPP6R1Q9UPN7 881 aa9.21□□□□□ -0.94
FDFT1-216ENST00000529521 ADRA2BP18089 450 aa9.16□□□□□ -0.94
FDFT1-216ENST00000529521 PLPPR3Q6T4P5 718 aa9.13□□□□□ -0.95
FDFT1-216ENST00000529521 MAPK8IP2Q13387 824 aaPredicted RBP8.51□□□□□ -1.05
FDFT1-216ENST00000529521 DMRT2Q9Y5R5 561 aa8.49□□□□□ -1.05
FDFT1-216ENST00000529521 CACNB1Q02641 598 aaPredicted RBP8.37□□□□□ -1.07
FDFT1-216ENST00000529521 SCAF1Q9H7N4 1312 aaKnown RBP8.31□□□□□ -1.08
FDFT1-216ENST00000529521 DCAF8L1A6NGE4 600 aa8.14□□□□□ -1.11
FDFT1-216ENST00000529521 RNF39Q9H2S5 420 aa8.12□□□□□ -1.11
FDFT1-216ENST00000529521 HOXD11P31277 338 aaPredicted RBP8.06□□□□□ -1.12
FDFT1-216ENST00000529521 PPP4R3CPQ6ZMV5 832 aa7.98□□□□□ -1.13
FDFT1-216ENST00000529521 C1QBPQ07021 282 aaKnown RBP7.96□□□□□ -1.14
FDFT1-216ENST00000529521 RNF216Q9NWF9 866 aaPredicted RBP7.9□□□□□ -1.14
FDFT1-216ENST00000529521 CNKSR2Q8WXI2 1034 aa7.89□□□□□ -1.15
FDFT1-216ENST00000529521 DNAJC5BQ9UF47 199 aa7.82□□□□□ -1.16
FDFT1-216ENST00000529521 POTEHQ6S545 545 aa7.65□□□□□ -1.18
FDFT1-216ENST00000529521 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.65□□□□□ -1.182e-11■■■■■ 27.4
FDFT1-216ENST00000529521 NCBP3Q53F19 620 aaKnown RBP7.54□□□□□ -1.2
FDFT1-216ENST00000529521 DSG3P32926 999 aa7.51□□□□□ -1.21
FDFT1-216ENST00000529521 SPINK5Q9NQ38 1064 aaPredicted RBP7.49□□□□□ -1.21
FDFT1-216ENST00000529521 U3KPZ7 1027 aaPredicted RBP7.49□□□□□ -1.21
FDFT1-216ENST00000529521 NPM3O75607 178 aaKnown RBP7.47□□□□□ -1.21
FDFT1-216ENST00000529521 CAPN15O75808 1086 aa7.45□□□□□ -1.22
FDFT1-216ENST00000529521 ABCB7O75027 752 aa7.26□□□□□ -1.25
FDFT1-216ENST00000529521 TRHP20396 242 aaPredicted RBP7.26□□□□□ -1.25
FDFT1-216ENST00000529521 SLC4A2P04920 1241 aa7.24□□□□□ -1.25
FDFT1-216ENST00000529521 ZNF219Q9P2Y4 722 aaPredicted RBP7.22□□□□□ -1.25
FDFT1-216ENST00000529521 APLP2Q06481 763 aa7.17□□□□□ -1.26
FDFT1-216ENST00000529521 CHRDL2Q6WN34 429 aa7.13□□□□□ -1.27
FDFT1-216ENST00000529521 RBM42Q9BTD8 480 aaKnown RBP7.13□□□□□ -1.27
FDFT1-216ENST00000529521 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.12□□□□□ -1.27
FDFT1-216ENST00000529521 HNRNPUL2Q1KMD3 747 aaKnown RBP7.12□□□□□ -1.27
FDFT1-216ENST00000529521 KCNA4P22459 653 aa7.07□□□□□ -1.28
FDFT1-216ENST00000529521 SAMD1Q6SPF0 538 aaPredicted RBP7.07□□□□□ -1.28
FDFT1-216ENST00000529521 SP7Q8TDD2 431 aaPredicted RBP7.02□□□□□ -1.29
FDFT1-216ENST00000529521 POLA2Q14181 598 aa7□□□□□ -1.29
FDFT1-216ENST00000529521 AKT1S1Q96B36 256 aa6.91□□□□□ -1.3
FDFT1-216ENST00000529521 MYCNP04198 464 aaPredicted RBP6.9□□□□□ -1.3
FDFT1-216ENST00000529521 PIP4P2Q8N4L2 257 aa6.9□□□□□ -1.3
FDFT1-216ENST00000529521 REM2Q8IYK8 340 aaPredicted RBP6.87□□□□□ -1.31
FDFT1-216ENST00000529521 HAX1O00165 279 aa6.84□□□□□ -1.31
FDFT1-216ENST00000529521 ATF5Q9Y2D1 282 aaPredicted RBP6.81□□□□□ -1.32
FDFT1-216ENST00000529521 PITPNM1O00562 1244 aa6.8□□□□□ -1.32
FDFT1-216ENST00000529521 FXR2P51116 673 aaKnown RBP eCLIP6.8□□□□□ -1.323e-8■□□□□ 10.2
FDFT1-216ENST00000529521 OSCARQ8IYS5 282 aa6.8□□□□□ -1.32
FDFT1-216ENST00000529521 ZBTB12Q9Y330 459 aaPredicted RBP6.79□□□□□ -1.32
FDFT1-216ENST00000529521 EVX2Q03828 476 aa6.78□□□□□ -1.32
FDFT1-216ENST00000529521 FOXD4L1Q9NU39 408 aa6.66□□□□□ -1.34
FDFT1-216ENST00000529521 PRKAR2AP13861 404 aaKnown RBP6.61□□□□□ -1.35
FDFT1-216ENST00000529521 C19orf67A6NJJ6 358 aa6.6□□□□□ -1.35
FDFT1-216ENST00000529521 SLC4A1APQ9BWU0 796 aaKnown RBP6.59□□□□□ -1.35
FDFT1-216ENST00000529521 SPDYE2BA6NHP3 402 aa6.58□□□□□ -1.36
FDFT1-216ENST00000529521 GABBR2O75899 941 aa6.58□□□□□ -1.36
FDFT1-216ENST00000529521 SPDYE6P0CI01 402 aa6.58□□□□□ -1.36
FDFT1-216ENST00000529521 SPDYE2Q495Y8 402 aa6.58□□□□□ -1.36
FDFT1-216ENST00000529521 LHX8Q68G74 356 aa6.58□□□□□ -1.36
FDFT1-216ENST00000529521 CLEC11AQ9Y240 323 aa6.56□□□□□ -1.36
FDFT1-216ENST00000529521 SPDYE1Q8NFV5 336 aaPredicted RBP6.54□□□□□ -1.36
FDFT1-216ENST00000529521 ZBTB22O15209 634 aa6.51□□□□□ -1.37
FDFT1-216ENST00000529521 FBLN2P98095 1184 aa6.5□□□□□ -1.37
FDFT1-216ENST00000529521 CHADLQ6NUI6 762 aa6.49□□□□□ -1.37
FDFT1-216ENST00000529521 ATXN8OSP0DMR3 200 aa6.48□□□□□ -1.37
FDFT1-216ENST00000529521 MKRN4PQ13434 485 aaPredicted RBP6.48□□□□□ -1.37
FDFT1-216ENST00000529521 SSUH2Q9Y2M2 353 aa6.48□□□□□ -1.37
FDFT1-216ENST00000529521 POTEIP0CG38 1075 aa6.46□□□□□ -1.38
FDFT1-216ENST00000529521 ZNF692Q9BU19 519 aaPredicted RBP6.46□□□□□ -1.38
FDFT1-216ENST00000529521 PLSCR2Q9NRY7 297 aa6.41□□□□□ -1.38
FDFT1-216ENST00000529521 PRR29P0C7W0 189 aa6.4□□□□□ -1.38
FDFT1-216ENST00000529521 CD44P16070 742 aaKnown RBP6.38□□□□□ -1.39
FDFT1-216ENST00000529521 PABPN1Q86U42 306 aaKnown RBP eCLIP6.37□□□□□ -1.39
FDFT1-216ENST00000529521 FARP1Q9Y4F1 1045 aaPredicted RBP6.35□□□□□ -1.39
FDFT1-216ENST00000529521 CLCN6P51797 869 aa6.32□□□□□ -1.4
FDFT1-216ENST00000529521 DCBLD2Q96PD2 775 aa6.31□□□□□ -1.4
FDFT1-216ENST00000529521 ZNF579Q8NAF0 562 aaKnown RBP6.27□□□□□ -1.41
FDFT1-216ENST00000529521 OTUD5Q96G74 571 aa6.27□□□□□ -1.41
FDFT1-216ENST00000529521 POTEB2H3BUK9 544 aa6.24□□□□□ -1.41
FDFT1-216ENST00000529521 ZRANB1Q9UGI0 708 aa6.24□□□□□ -1.41
FDFT1-216ENST00000529521 GALR2O43603 387 aaPredicted RBP6.23□□□□□ -1.41
FDFT1-216ENST00000529521 POTEMA6NI47 508 aa6.22□□□□□ -1.41
FDFT1-216ENST00000529521 POTEGQ6S5H5 508 aa6.19□□□□□ -1.42
FDFT1-216ENST00000529521 CREBZFQ9NS37 354 aa6.19□□□□□ -1.42
FDFT1-216ENST00000529521 PELP1Q8IZL8 1130 aaKnown RBP6.15□□□□□ -1.42
FDFT1-216ENST00000529521 PHF12Q96QT6 1004 aa6.15□□□□□ -1.42
FDFT1-216ENST00000529521 POTEJP0CG39 1038 aa6.11□□□□□ -1.43
FDFT1-216ENST00000529521 PCDH10Q9P2E7 1040 aa6.1□□□□□ -1.43
FDFT1-216ENST00000529521 PAK3O75914 559 aaPredicted RBP6.09□□□□□ -1.43
FDFT1-216ENST00000529521 STAG3Q9UJ98 1225 aa6.09□□□□□ -1.43
FDFT1-216ENST00000529521 LCE2DQ5TA82 110 aaPredicted RBP6.08□□□□□ -1.44
FDFT1-216ENST00000529521 METRNQ9UJH8 293 aa6.08□□□□□ -1.44
FDFT1-216ENST00000529521 ASTLQ6HA08 431 aaPredicted RBP6.07□□□□□ -1.44
FDFT1-216ENST00000529521 MNX1P50219 401 aaPredicted RBP6.06□□□□□ -1.44
FDFT1-216ENST00000529521 ATMINO43313 823 aaPredicted RBP6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms