RNA–Protein interactions for RNA: ENST00000528643.5

FDFT1-212, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 1,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-212ENST00000528643 CHIC1Q5VXU3 224 aa19■□□□□ 0.63
FDFT1-212ENST00000528643 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
FDFT1-212ENST00000528643 AEBP2Q6ZN18 517 aaPredicted RBP18.47■□□□□ 0.55
FDFT1-212ENST00000528643 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
FDFT1-212ENST00000528643 CCDC180Q9P1Z9 1646 aa16.18■□□□□ 0.18
FDFT1-212ENST00000528643 PLPPR3Q6T4P5 718 aa15.89■□□□□ 0.13
FDFT1-212ENST00000528643 ZCCHC6Q5VYS8 1495 aaKnown RBP15.68■□□□□ 0.1
FDFT1-212ENST00000528643 EHMT2Q96KQ7 1210 aa15.47■□□□□ 0.07
FDFT1-212ENST00000528643 SENP3Q9H4L4 574 aaPredicted RBP15.4■□□□□ 0.06
FDFT1-212ENST00000528643 DCAF1Q9Y4B6 1507 aa15.38■□□□□ 0.05
FDFT1-212ENST00000528643 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
FDFT1-212ENST00000528643 DCAF8L2P0C7V8 631 aa15.27■□□□□ 0.04
FDFT1-212ENST00000528643 ABCC9O60706 1549 aa15.15■□□□□ 0.02
FDFT1-212ENST00000528643 MYO15BQ96JP2 1530 aa15.13■□□□□ 0.01
FDFT1-212ENST00000528643 KCNA4P22459 653 aa15.11■□□□□ 0.01
FDFT1-212ENST00000528643 NACADO15069 1562 aa15□□□□□ -0.01
FDFT1-212ENST00000528643 ADRA2BP18089 450 aa14.98□□□□□ -0.01
FDFT1-212ENST00000528643 SCRIBQ14160 1630 aa14.92□□□□□ -0.02
FDFT1-212ENST00000528643 RB1CC1Q8TDY2 1594 aa14.84□□□□□ -0.03
FDFT1-212ENST00000528643 SUPT5HO00267 1087 aaKnown RBP14.77□□□□□ -0.04
FDFT1-212ENST00000528643 CSRNP3Q8WYN3 585 aa14.72□□□□□ -0.05
FDFT1-212ENST00000528643 UNC13AQ9UPW8 1703 aa14.67□□□□□ -0.06
FDFT1-212ENST00000528643 PPP6R1Q9UPN7 881 aa14.6□□□□□ -0.07
FDFT1-212ENST00000528643 SLC4A1APQ9BWU0 796 aaKnown RBP14.55□□□□□ -0.08
FDFT1-212ENST00000528643 RSF1Q96T23 1441 aaPredicted RBP14.5□□□□□ -0.09
FDFT1-212ENST00000528643 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
FDFT1-212ENST00000528643 BICRAQ9NZM4 1560 aa14.44□□□□□ -0.1
FDFT1-212ENST00000528643 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
FDFT1-212ENST00000528643 BAZ1AQ9NRL2 1556 aaPredicted RBP14.35□□□□□ -0.11
FDFT1-212ENST00000528643 SLC24A1O60721 1099 aa14.34□□□□□ -0.11
FDFT1-212ENST00000528643 WIZO95785 1651 aa14.33□□□□□ -0.12
FDFT1-212ENST00000528643 SMARCA4P51532 1647 aa14.31□□□□□ -0.12
FDFT1-212ENST00000528643 PABPN1Q86U42 306 aaKnown RBP eCLIP14.3□□□□□ -0.12
FDFT1-212ENST00000528643 FOXD1Q16676 465 aa14.24□□□□□ -0.13
FDFT1-212ENST00000528643 PPP4R3CPQ6ZMV5 832 aa14.18□□□□□ -0.14
FDFT1-212ENST00000528643 TOP2AP11388 1531 aaKnown RBP14.14□□□□□ -0.15
FDFT1-212ENST00000528643 PEG3Q9GZU2 1588 aa14.11□□□□□ -0.15
FDFT1-212ENST00000528643 NCBP3Q53F19 620 aaKnown RBP14.05□□□□□ -0.16
FDFT1-212ENST00000528643 SMARCA2P51531 1590 aa14.04□□□□□ -0.16
FDFT1-212ENST00000528643 EIF4G1Q04637 1599 aaKnown RBP14.02□□□□□ -0.17
FDFT1-212ENST00000528643 CCDC88BA6NC98 1476 aa14□□□□□ -0.17
FDFT1-212ENST00000528643 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
FDFT1-212ENST00000528643 RTN4Q9NQC3 1192 aaKnown RBP14□□□□□ -0.17
FDFT1-212ENST00000528643 ZBTB22O15209 634 aa13.94□□□□□ -0.18
FDFT1-212ENST00000528643 BAZ1BQ9UIG0 1483 aaKnown RBP13.92□□□□□ -0.18
FDFT1-212ENST00000528643 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
FDFT1-212ENST00000528643 AMER1Q5JTC6 1135 aaPredicted RBP13.87□□□□□ -0.19
FDFT1-212ENST00000528643 HMGXB3Q12766 1538 aa13.86□□□□□ -0.19
FDFT1-212ENST00000528643 TRIM41Q8WV44 630 aa13.85□□□□□ -0.19
FDFT1-212ENST00000528643 NCAPD3P42695 1498 aa13.83□□□□□ -0.2
FDFT1-212ENST00000528643 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
FDFT1-212ENST00000528643 CC2D2AQ9P2K1 1620 aa13.74□□□□□ -0.21
FDFT1-212ENST00000528643 LOC105371045A0A1W2PR82 267 aa13.7□□□□□ -0.22
FDFT1-212ENST00000528643 PIAS4Q8N2W9 510 aaPredicted RBP13.7□□□□□ -0.22
FDFT1-212ENST00000528643 WRNQ14191 1432 aaPredicted RBP eCLIP13.63□□□□□ -0.23
FDFT1-212ENST00000528643 FAM9AQ8IZU1 332 aaPredicted RBP13.62□□□□□ -0.23
FDFT1-212ENST00000528643 SYNJ1O43426 1573 aa13.62□□□□□ -0.23
FDFT1-212ENST00000528643 PRDM2Q13029 1718 aa13.61□□□□□ -0.23
FDFT1-212ENST00000528643 CFTRP13569 1480 aa13.59□□□□□ -0.23
FDFT1-212ENST00000528643 TOP2BQ02880 1626 aa13.54□□□□□ -0.24
FDFT1-212ENST00000528643 BIVM-ERCC5R4GMW8 1640 aa13.53□□□□□ -0.24
FDFT1-212ENST00000528643 SOGA1O94964 1423 aa13.53□□□□□ -0.24
FDFT1-212ENST00000528643 FOXD4L1Q9NU39 408 aa13.52□□□□□ -0.24
FDFT1-212ENST00000528643 CNKSR2Q8WXI2 1034 aa13.5□□□□□ -0.25
FDFT1-212ENST00000528643 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
FDFT1-212ENST00000528643 EEA1Q15075 1411 aa13.49□□□□□ -0.25
FDFT1-212ENST00000528643 CADPSQ9ULU8 1353 aa13.49□□□□□ -0.25
FDFT1-212ENST00000528643 CUX1P39880 1505 aa13.47□□□□□ -0.25
FDFT1-212ENST00000528643 NESP48681 1621 aa13.37□□□□□ -0.27
FDFT1-212ENST00000528643 KIF21BO75037 1637 aa13.37□□□□□ -0.27
FDFT1-212ENST00000528643 FANCD2Q9BXW9 1451 aa13.36□□□□□ -0.27
FDFT1-212ENST00000528643 LAMC3Q9Y6N6 1575 aa13.36□□□□□ -0.27
FDFT1-212ENST00000528643 DNAJC5BQ9UF47 199 aa13.35□□□□□ -0.27
FDFT1-212ENST00000528643 GOLGA3Q08378 1498 aa13.33□□□□□ -0.27
FDFT1-212ENST00000528643 CEP164Q9UPV0 1460 aa13.32□□□□□ -0.28
FDFT1-212ENST00000528643 TNIKQ9UKE5 1360 aa13.32□□□□□ -0.28
FDFT1-212ENST00000528643 DNMBPQ6XZF7 1577 aa13.28□□□□□ -0.28
FDFT1-212ENST00000528643 CEP162Q5TB80 1403 aa13.28□□□□□ -0.28
FDFT1-212ENST00000528643 FGD5Q6ZNL6 1462 aa13.28□□□□□ -0.28
FDFT1-212ENST00000528643 SCAF1Q9H7N4 1312 aaKnown RBP13.27□□□□□ -0.29
FDFT1-212ENST00000528643 FKBP8Q14318 412 aa13.26□□□□□ -0.29
FDFT1-212ENST00000528643 RAPGEF2Q9Y4G8 1499 aa13.25□□□□□ -0.29
FDFT1-212ENST00000528643 KIF27Q86VH2 1401 aa13.25□□□□□ -0.29
FDFT1-212ENST00000528643 KIF21AQ7Z4S6 1674 aa13.25□□□□□ -0.29
FDFT1-212ENST00000528643 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
FDFT1-212ENST00000528643 UBTFP17480 764 aaKnown RBP13.23□□□□□ -0.29
FDFT1-212ENST00000528643 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
FDFT1-212ENST00000528643 ERICH3Q5RHP9 1530 aa13.23□□□□□ -0.29
FDFT1-212ENST00000528643 PCGF6Q9BYE7 350 aa13.22□□□□□ -0.29
FDFT1-212ENST00000528643 PDS5BQ9NTI5 1447 aa13.22□□□□□ -0.29
FDFT1-212ENST00000528643 CUX2O14529 1486 aa13.21□□□□□ -0.3
FDFT1-212ENST00000528643 URB2Q14146 1524 aaKnown RBP13.21□□□□□ -0.3
FDFT1-212ENST00000528643 POLA1P09884 1462 aaPredicted RBP13.2□□□□□ -0.3
FDFT1-212ENST00000528643 WDR97A6NE52 1622 aa13.16□□□□□ -0.3
FDFT1-212ENST00000528643 ABCA10Q8WWZ4 1543 aa13.16□□□□□ -0.3
FDFT1-212ENST00000528643 RAD54L2Q9Y4B4 1467 aa13.16□□□□□ -0.3
FDFT1-212ENST00000528643 TRIM26Q12899 539 aaPredicted RBP13.15□□□□□ -0.3
FDFT1-212ENST00000528643 IGF1RP08069 1367 aa13.14□□□□□ -0.31
FDFT1-212ENST00000528643 CLIP1P30622 1438 aa13.13□□□□□ -0.31
FDFT1-212ENST00000528643 ABCA5Q8WWZ7 1642 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms