RNA–Protein interactions for RNA: ENST00000550260.1

LARP4-215, Transcript of La ribonucleoprotein domain family member 4, humanhuman

TSL 3

Gene LARP4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4-215ENST00000550260 AEBP2Q6ZN18 517 aaPredicted RBP21.14■□□□□ 0.97
LARP4-215ENST00000550260 CHIC1Q5VXU3 224 aa19.76■□□□□ 0.75
LARP4-215ENST00000550260 SENP3Q9H4L4 574 aaPredicted RBP18.16■□□□□ 0.5
LARP4-215ENST00000550260 PHF23Q9BUL5 403 aaPredicted RBP17.82■□□□□ 0.44
LARP4-215ENST00000550260 FOXD1Q16676 465 aa16.99■□□□□ 0.31
LARP4-215ENST00000550260 POTEDQ86YR6 584 aa16.89■□□□□ 0.29
LARP4-215ENST00000550260 MSH5O43196 834 aa16.18■□□□□ 0.18
LARP4-215ENST00000550260 PIAS4Q8N2W9 510 aaPredicted RBP15.71■□□□□ 0.11
LARP4-215ENST00000550260 PLPPR3Q6T4P5 718 aa15.39■□□□□ 0.05
LARP4-215ENST00000550260 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
LARP4-215ENST00000550260 ADRA2BP18089 450 aa15.28■□□□□ 0.04
LARP4-215ENST00000550260 DMRT2Q9Y5R5 561 aa14.3□□□□□ -0.12
LARP4-215ENST00000550260 CACNB1Q02641 598 aaPredicted RBP14.26□□□□□ -0.13
LARP4-215ENST00000550260 MAPK8IP2Q13387 824 aaPredicted RBP14.23□□□□□ -0.13
LARP4-215ENST00000550260 SCAF1Q9H7N4 1312 aaKnown RBP14.01□□□□□ -0.17
LARP4-215ENST00000550260 RNF39Q9H2S5 420 aa13.74□□□□□ -0.21
LARP4-215ENST00000550260 DCAF8L1A6NGE4 600 aa13.71□□□□□ -0.21
LARP4-215ENST00000550260 HOXD11P31277 338 aaPredicted RBP13.51□□□□□ -0.25
LARP4-215ENST00000550260 C1QBPQ07021 282 aaKnown RBP13.51□□□□□ -0.25
LARP4-215ENST00000550260 PPP4R3CPQ6ZMV5 832 aa13.49□□□□□ -0.25
LARP4-215ENST00000550260 RNF216Q9NWF9 866 aaPredicted RBP13.24□□□□□ -0.29
LARP4-215ENST00000550260 CNKSR2Q8WXI2 1034 aa13.22□□□□□ -0.29
LARP4-215ENST00000550260 DNAJC5BQ9UF47 199 aa13.22□□□□□ -0.29
LARP4-215ENST00000550260 POTEHQ6S545 545 aa13.11□□□□□ -0.31
LARP4-215ENST00000550260 NCBP3Q53F19 620 aaKnown RBP13.06□□□□□ -0.32
LARP4-215ENST00000550260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.86□□□□□ -0.353e-6■□□□□ 8.1
LARP4-215ENST00000550260 NPM3O75607 178 aaKnown RBP12.79□□□□□ -0.36
LARP4-215ENST00000550260 KCNA4P22459 653 aa12.64□□□□□ -0.39
LARP4-215ENST00000550260 DSG3P32926 999 aa12.64□□□□□ -0.39
LARP4-215ENST00000550260 CAPN15O75808 1086 aa12.53□□□□□ -0.4
LARP4-215ENST00000550260 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
LARP4-215ENST00000550260 U3KPZ7 1027 aaPredicted RBP12.51□□□□□ -0.41
LARP4-215ENST00000550260 ABCB7O75027 752 aa12.17□□□□□ -0.46
LARP4-215ENST00000550260 TRHP20396 242 aaPredicted RBP12.17□□□□□ -0.46
LARP4-215ENST00000550260 SLC4A2P04920 1241 aa12.15□□□□□ -0.46
LARP4-215ENST00000550260 ZNF219Q9P2Y4 722 aaPredicted RBP12.15□□□□□ -0.46
LARP4-215ENST00000550260 APLP2Q06481 763 aa12.12□□□□□ -0.47
LARP4-215ENST00000550260 RBM42Q9BTD8 480 aaKnown RBP12.08□□□□□ -0.48
LARP4-215ENST00000550260 CHRDL2Q6WN34 429 aa12.07□□□□□ -0.48
LARP4-215ENST00000550260 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
LARP4-215ENST00000550260 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
LARP4-215ENST00000550260 SLC4A1APQ9BWU0 796 aaKnown RBP12.01□□□□□ -0.49
LARP4-215ENST00000550260 SP7Q8TDD2 431 aaPredicted RBP11.98□□□□□ -0.49
LARP4-215ENST00000550260 SAMD1Q6SPF0 538 aaPredicted RBP11.93□□□□□ -0.5
LARP4-215ENST00000550260 MYCNP04198 464 aaPredicted RBP11.87□□□□□ -0.51
LARP4-215ENST00000550260 FOXD4L1Q9NU39 408 aa11.79□□□□□ -0.52
LARP4-215ENST00000550260 POLA2Q14181 598 aa11.71□□□□□ -0.53
LARP4-215ENST00000550260 AKT1S1Q96B36 256 aa11.66□□□□□ -0.54
LARP4-215ENST00000550260 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
LARP4-215ENST00000550260 HAX1O00165 279 aa11.6□□□□□ -0.55
LARP4-215ENST00000550260 ZBTB22O15209 634 aa11.57□□□□□ -0.56
LARP4-215ENST00000550260 REM2Q8IYK8 340 aaPredicted RBP11.55□□□□□ -0.56
LARP4-215ENST00000550260 ATF5Q9Y2D1 282 aaPredicted RBP11.53□□□□□ -0.56
LARP4-215ENST00000550260 FXR2P51116 673 aaKnown RBP eCLIP11.48□□□□□ -0.57
LARP4-215ENST00000550260 ZBTB12Q9Y330 459 aaPredicted RBP11.44□□□□□ -0.58
LARP4-215ENST00000550260 PITPNM1O00562 1244 aa11.42□□□□□ -0.58
LARP4-215ENST00000550260 EVX2Q03828 476 aa11.4□□□□□ -0.58
LARP4-215ENST00000550260 ATXN8OSP0DMR3 200 aa11.39□□□□□ -0.59
LARP4-215ENST00000550260 OSCARQ8IYS5 282 aa11.35□□□□□ -0.59
LARP4-215ENST00000550260 EHMT2Q96KQ7 1210 aa11.25□□□□□ -0.61
LARP4-215ENST00000550260 LHX8Q68G74 356 aa11.23□□□□□ -0.61
LARP4-215ENST00000550260 FBLN2P98095 1184 aa11.19□□□□□ -0.62
LARP4-215ENST00000550260 CSRNP3Q8WYN3 585 aa11.16□□□□□ -0.62
LARP4-215ENST00000550260 C19orf67A6NJJ6 358 aa11.13□□□□□ -0.63
LARP4-215ENST00000550260 GABBR2O75899 941 aa11.12□□□□□ -0.63
LARP4-215ENST00000550260 PRKAR2AP13861 404 aaKnown RBP11.12□□□□□ -0.63
LARP4-215ENST00000550260 PLSCR2Q9NRY7 297 aa11.04□□□□□ -0.64
LARP4-215ENST00000550260 SPDYE2BA6NHP3 402 aa11.02□□□□□ -0.65
LARP4-215ENST00000550260 SPDYE6P0CI01 402 aa11.02□□□□□ -0.65
LARP4-215ENST00000550260 SPDYE2Q495Y8 402 aa11.02□□□□□ -0.65
LARP4-215ENST00000550260 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
LARP4-215ENST00000550260 SPDYE1Q8NFV5 336 aaPredicted RBP10.99□□□□□ -0.65
LARP4-215ENST00000550260 CLEC11AQ9Y240 323 aa10.98□□□□□ -0.65
LARP4-215ENST00000550260 ZNF692Q9BU19 519 aaPredicted RBP10.95□□□□□ -0.66
LARP4-215ENST00000550260 POTEIP0CG38 1075 aa10.87□□□□□ -0.67
LARP4-215ENST00000550260 CHADLQ6NUI6 762 aa10.84□□□□□ -0.67
LARP4-215ENST00000550260 SSUH2Q9Y2M2 353 aa10.83□□□□□ -0.68
LARP4-215ENST00000550260 PABPN1Q86U42 306 aaKnown RBP eCLIP10.77□□□□□ -0.69
LARP4-215ENST00000550260 CLCN6P51797 869 aa10.76□□□□□ -0.69
LARP4-215ENST00000550260 CD44P16070 742 aaKnown RBP10.73□□□□□ -0.69
LARP4-215ENST00000550260 PRR29P0C7W0 189 aa10.72□□□□□ -0.69
LARP4-215ENST00000550260 DCBLD2Q96PD2 775 aa10.68□□□□□ -0.7
LARP4-215ENST00000550260 FARP1Q9Y4F1 1045 aaPredicted RBP10.64□□□□□ -0.71
LARP4-215ENST00000550260 SPDYE4A6NLX3 237 aa10.61□□□□□ -0.71
LARP4-215ENST00000550260 OTUD5Q96G74 571 aa10.61□□□□□ -0.71
LARP4-215ENST00000550260 POTEMA6NI47 508 aa10.6□□□□□ -0.71
LARP4-215ENST00000550260 ZNF579Q8NAF0 562 aaKnown RBP10.55□□□□□ -0.72
LARP4-215ENST00000550260 POTEGQ6S5H5 508 aa10.54□□□□□ -0.72
LARP4-215ENST00000550260 PCDH10Q9P2E7 1040 aa10.51□□□□□ -0.73
LARP4-215ENST00000550260 STAG3Q9UJ98 1225 aa10.51□□□□□ -0.73
LARP4-215ENST00000550260 POTEB2H3BUK9 544 aa10.5□□□□□ -0.73
LARP4-215ENST00000550260 ZRANB1Q9UGI0 708 aa10.47□□□□□ -0.73
LARP4-215ENST00000550260 GALR2O43603 387 aaPredicted RBP10.44□□□□□ -0.74
LARP4-215ENST00000550260 CREBZFQ9NS37 354 aa10.35□□□□□ -0.75
LARP4-215ENST00000550260 PELP1Q8IZL8 1130 aaKnown RBP10.31□□□□□ -0.76
LARP4-215ENST00000550260 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
LARP4-215ENST00000550260 LCE2DQ5TA82 110 aaPredicted RBP10.26□□□□□ -0.77
LARP4-215ENST00000550260 PHF12Q96QT6 1004 aa10.26□□□□□ -0.77
LARP4-215ENST00000550260 NPM1P06748 294 aaKnown RBP eCLIP10.25□□□□□ -0.77
LARP4-215ENST00000550260 POTEJP0CG39 1038 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms