RNA–Protein interactions for RNA: ENST00000583903.5

PPP4R1-226, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-226ENST00000583903 NISCHQ9Y2I1 1504 aa18.24■□□□□ 0.51
PPP4R1-226ENST00000583903 ABCC9O60706 1549 aa17.31■□□□□ 0.36
PPP4R1-226ENST00000583903 DNAJC5BQ9UF47 199 aa16.92■□□□□ 0.3
PPP4R1-226ENST00000583903 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
PPP4R1-226ENST00000583903 RB1CC1Q8TDY2 1594 aa16.17■□□□□ 0.18
PPP4R1-226ENST00000583903 PABPN1Q86U42 306 aaKnown RBP eCLIP16.03■□□□□ 0.16
PPP4R1-226ENST00000583903 DNAJC5Q9H3Z4 198 aa16.02■□□□□ 0.16
PPP4R1-226ENST00000583903 NACADO15069 1562 aa15.91■□□□□ 0.14
PPP4R1-226ENST00000583903 UNC13AQ9UPW8 1703 aa15.76■□□□□ 0.11
PPP4R1-226ENST00000583903 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
PPP4R1-226ENST00000583903 CECR2Q9BXF3 1484 aa15.68■□□□□ 0.1
PPP4R1-226ENST00000583903 DCAF8L2P0C7V8 631 aa15.66■□□□□ 0.1
PPP4R1-226ENST00000583903 CC2D2AQ9P2K1 1620 aa15.6■□□□□ 0.09
PPP4R1-226ENST00000583903 MYO15BQ96JP2 1530 aa15.49■□□□□ 0.07
PPP4R1-226ENST00000583903 SHROOM4Q9ULL8 1493 aa15.47■□□□□ 0.07
PPP4R1-226ENST00000583903 EIF4G1Q04637 1599 aaKnown RBP15.4■□□□□ 0.06
PPP4R1-226ENST00000583903 CUX2O14529 1486 aa15.21■□□□□ 0.03
PPP4R1-226ENST00000583903 SCRIBQ14160 1630 aa15.09■□□□□ 0.01
PPP4R1-226ENST00000583903 DCAF1Q9Y4B6 1507 aa15.03■□□□□ -0
PPP4R1-226ENST00000583903 ERCC6Q03468 1493 aa14.98□□□□□ -0.01
PPP4R1-226ENST00000583903 TRIM41Q8WV44 630 aa14.98□□□□□ -0.01
PPP4R1-226ENST00000583903 ZCCHC6Q5VYS8 1495 aaKnown RBP14.97□□□□□ -0.01
PPP4R1-226ENST00000583903 NCAPD3P42695 1498 aa14.73□□□□□ -0.05
PPP4R1-226ENST00000583903 NESP48681 1621 aa14.69□□□□□ -0.06
PPP4R1-226ENST00000583903 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
PPP4R1-226ENST00000583903 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
PPP4R1-226ENST00000583903 HMGXB3Q12766 1538 aa14.52□□□□□ -0.08
PPP4R1-226ENST00000583903 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
PPP4R1-226ENST00000583903 LAMC3Q9Y6N6 1575 aa14.46□□□□□ -0.09
PPP4R1-226ENST00000583903 AEBP2Q6ZN18 517 aaPredicted RBP14.45□□□□□ -0.1
PPP4R1-226ENST00000583903 KIF21AQ7Z4S6 1674 aa14.42□□□□□ -0.1
PPP4R1-226ENST00000583903 OSCARQ8IYS5 282 aa14.42□□□□□ -0.1
PPP4R1-226ENST00000583903 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
PPP4R1-226ENST00000583903 BAZ1AQ9NRL2 1556 aaPredicted RBP14.39□□□□□ -0.11
PPP4R1-226ENST00000583903 BAZ1BQ9UIG0 1483 aaKnown RBP14.37□□□□□ -0.11
PPP4R1-226ENST00000583903 SMARCA4P51532 1647 aa14.35□□□□□ -0.11
PPP4R1-226ENST00000583903 MRC2Q9UBG0 1479 aa14.32□□□□□ -0.12
PPP4R1-226ENST00000583903 WDR62O43379 1518 aa14.31□□□□□ -0.12
PPP4R1-226ENST00000583903 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
PPP4R1-226ENST00000583903 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
PPP4R1-226ENST00000583903 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
PPP4R1-226ENST00000583903 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
PPP4R1-226ENST00000583903 CADPSQ9ULU8 1353 aa14.23□□□□□ -0.13
PPP4R1-226ENST00000583903 ARHGEF11O15085 1522 aa14.17□□□□□ -0.14
PPP4R1-226ENST00000583903 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
PPP4R1-226ENST00000583903 CYB5RLQ6IPT4 315 aa14.12□□□□□ -0.15
PPP4R1-226ENST00000583903 CEP164Q9UPV0 1460 aa14.12□□□□□ -0.15
PPP4R1-226ENST00000583903 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
PPP4R1-226ENST00000583903 MROH2BQ7Z745 1585 aa14.05□□□□□ -0.16
PPP4R1-226ENST00000583903 URB2Q14146 1524 aaKnown RBP14□□□□□ -0.17
PPP4R1-226ENST00000583903 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
PPP4R1-226ENST00000583903 ZNF608Q9ULD9 1512 aaPredicted RBP13.94□□□□□ -0.18
PPP4R1-226ENST00000583903 CFTRP13569 1480 aa13.93□□□□□ -0.18
PPP4R1-226ENST00000583903 IFT140Q96RY7 1462 aa13.88□□□□□ -0.19
PPP4R1-226ENST00000583903 RSF1Q96T23 1441 aaPredicted RBP13.88□□□□□ -0.19
PPP4R1-226ENST00000583903 WIZO95785 1651 aa13.81□□□□□ -0.2
PPP4R1-226ENST00000583903 EIF4G3O43432 1585 aaKnown RBP13.79□□□□□ -0.2
PPP4R1-226ENST00000583903 CHD1O14646 1710 aa13.78□□□□□ -0.2
PPP4R1-226ENST00000583903 ILDR1Q86SU0 546 aaPredicted RBP13.78□□□□□ -0.2
PPP4R1-226ENST00000583903 FBLN2P98095 1184 aa13.75□□□□□ -0.21
PPP4R1-226ENST00000583903 AQRO60306 1485 aaKnown RBP eCLIP13.73□□□□□ -0.217e-12■□□□□ 9.9
PPP4R1-226ENST00000583903 TOPBP1Q92547 1522 aa13.72□□□□□ -0.21
PPP4R1-226ENST00000583903 CLASP1Q7Z460 1538 aa13.67□□□□□ -0.22
PPP4R1-226ENST00000583903 TARBP1Q13395 1621 aaKnown RBP13.64□□□□□ -0.23
PPP4R1-226ENST00000583903 PRDM2Q13029 1718 aa13.64□□□□□ -0.23
PPP4R1-226ENST00000583903 ABCC8Q09428 1581 aa13.64□□□□□ -0.23
PPP4R1-226ENST00000583903 CHIC1Q5VXU3 224 aa13.62□□□□□ -0.23
PPP4R1-226ENST00000583903 TOP2AP11388 1531 aaKnown RBP13.6□□□□□ -0.23
PPP4R1-226ENST00000583903 DNMBPQ6XZF7 1577 aa13.59□□□□□ -0.23
PPP4R1-226ENST00000583903 GAPVD1Q14C86 1478 aa13.58□□□□□ -0.24
PPP4R1-226ENST00000583903 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
PPP4R1-226ENST00000583903 CHMP7Q8WUX9 453 aaPredicted RBP13.55□□□□□ -0.24
PPP4R1-226ENST00000583903 POTEDQ86YR6 584 aa13.54□□□□□ -0.24
PPP4R1-226ENST00000583903 TDRD9Q8NDG6 1382 aaKnown RBP13.54□□□□□ -0.24
PPP4R1-226ENST00000583903 POLA1P09884 1462 aaPredicted RBP13.54□□□□□ -0.24
PPP4R1-226ENST00000583903 SNAPC4Q5SXM2 1469 aa13.54□□□□□ -0.24
PPP4R1-226ENST00000583903 KDM4FA0A1W2PPD8 638 aa13.51□□□□□ -0.25
PPP4R1-226ENST00000583903 RAD54L2Q9Y4B4 1467 aa13.5□□□□□ -0.25
PPP4R1-226ENST00000583903 CCDC88BA6NC98 1476 aa13.48□□□□□ -0.25
PPP4R1-226ENST00000583903 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
PPP4R1-226ENST00000583903 SOGA1O94964 1423 aa13.47□□□□□ -0.25
PPP4R1-226ENST00000583903 SYNJ2O15056 1496 aa13.46□□□□□ -0.25
PPP4R1-226ENST00000583903 WDR97A6NE52 1622 aa13.43□□□□□ -0.26
PPP4R1-226ENST00000583903 KIF13AQ9H1H9 1805 aa13.42□□□□□ -0.26
PPP4R1-226ENST00000583903 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
PPP4R1-226ENST00000583903 ERCC6L2Q5T890 1561 aa13.4□□□□□ -0.26
PPP4R1-226ENST00000583903 FGD5Q6ZNL6 1462 aa13.35□□□□□ -0.27
PPP4R1-226ENST00000583903 FAM69CQ0P6D2 419 aa13.32□□□□□ -0.28
PPP4R1-226ENST00000583903 ABCC10Q5T3U5 1492 aa13.3□□□□□ -0.28
PPP4R1-226ENST00000583903 CEP170Q5SW79 1584 aa13.3□□□□□ -0.28
PPP4R1-226ENST00000583903 KDM6BO15054 1643 aa13.27□□□□□ -0.29
PPP4R1-226ENST00000583903 PBRM1Q86U86 1689 aa13.25□□□□□ -0.29
PPP4R1-226ENST00000583903 NUP160Q12769 1436 aa13.25□□□□□ -0.29
PPP4R1-226ENST00000583903 SHROOM2Q13796 1616 aa13.24□□□□□ -0.29
PPP4R1-226ENST00000583903 GRIN2AQ12879 1464 aa13.24□□□□□ -0.29
PPP4R1-226ENST00000583903 CUX1P39880 1505 aa13.23□□□□□ -0.29
PPP4R1-226ENST00000583903 FBXO41Q8TF61 875 aa13.23□□□□□ -0.29
PPP4R1-226ENST00000583903 HECW2Q9P2P5 1572 aa13.23□□□□□ -0.29
PPP4R1-226ENST00000583903 DIP2BQ9P265 1576 aa13.22□□□□□ -0.29
PPP4R1-226ENST00000583903 MAPKBP1O60336 1514 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms