RNA–Protein interactions for RNA: ENST00000578178.5

PPP4R1-208, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 468 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-208ENST00000578178 NISCHQ9Y2I1 1504 aa26.93■■□□□ 1.9
PPP4R1-208ENST00000578178 CCDC180Q9P1Z9 1646 aa24.09■■□□□ 1.45
PPP4R1-208ENST00000578178 ABCC9O60706 1549 aa23.63■■□□□ 1.37
PPP4R1-208ENST00000578178 RB1CC1Q8TDY2 1594 aa22.71■■□□□ 1.23
PPP4R1-208ENST00000578178 NACADO15069 1562 aa22.64■■□□□ 1.22
PPP4R1-208ENST00000578178 MYO15BQ96JP2 1530 aa22.47■■□□□ 1.19
PPP4R1-208ENST00000578178 DCAF8L2P0C7V8 631 aa22.44■■□□□ 1.18
PPP4R1-208ENST00000578178 ZCCHC6Q5VYS8 1495 aaKnown RBP22.44■■□□□ 1.18
PPP4R1-208ENST00000578178 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
PPP4R1-208ENST00000578178 UNC13AQ9UPW8 1703 aa22.22■■□□□ 1.15
PPP4R1-208ENST00000578178 BICRAQ9NZM4 1560 aa22.01■■□□□ 1.11
PPP4R1-208ENST00000578178 PABPN1Q86U42 306 aaKnown RBP eCLIP21.98■■□□□ 1.11
PPP4R1-208ENST00000578178 SCRIBQ14160 1630 aa21.92■■□□□ 1.1
PPP4R1-208ENST00000578178 SHROOM4Q9ULL8 1493 aa21.82■■□□□ 1.08
PPP4R1-208ENST00000578178 DNAJC5BQ9UF47 199 aa21.74■■□□□ 1.07
PPP4R1-208ENST00000578178 EIF4G1Q04637 1599 aaKnown RBP21.45■■□□□ 1.02
PPP4R1-208ENST00000578178 CC2D2AQ9P2K1 1620 aa21.4■■□□□ 1.02
PPP4R1-208ENST00000578178 CECR2Q9BXF3 1484 aa21.26■□□□□ 0.99
PPP4R1-208ENST00000578178 SMARCA4P51532 1647 aa20.96■□□□□ 0.95
PPP4R1-208ENST00000578178 BAZ1AQ9NRL2 1556 aaPredicted RBP20.91■□□□□ 0.94
PPP4R1-208ENST00000578178 NCAPD3P42695 1498 aa20.86■□□□□ 0.93
PPP4R1-208ENST00000578178 SMARCA2P51531 1590 aa20.85■□□□□ 0.93
PPP4R1-208ENST00000578178 ATAD2BQ9ULI0 1458 aa20.85■□□□□ 0.93
PPP4R1-208ENST00000578178 HMGXB3Q12766 1538 aa20.79■□□□□ 0.92
PPP4R1-208ENST00000578178 PEG3Q9GZU2 1588 aa20.76■□□□□ 0.91
PPP4R1-208ENST00000578178 MROH2BQ7Z745 1585 aa20.75■□□□□ 0.91
PPP4R1-208ENST00000578178 BAZ1BQ9UIG0 1483 aaKnown RBP20.69■□□□□ 0.9
PPP4R1-208ENST00000578178 WIZO95785 1651 aa20.53■□□□□ 0.88
PPP4R1-208ENST00000578178 RSF1Q96T23 1441 aaPredicted RBP20.44■□□□□ 0.86
PPP4R1-208ENST00000578178 NESP48681 1621 aa20.4■□□□□ 0.86
PPP4R1-208ENST00000578178 ERCC6Q03468 1493 aa20.4■□□□□ 0.86
PPP4R1-208ENST00000578178 LAMC3Q9Y6N6 1575 aa20.38■□□□□ 0.85
PPP4R1-208ENST00000578178 TOP2AP11388 1531 aaKnown RBP20.32■□□□□ 0.84
PPP4R1-208ENST00000578178 CUX2O14529 1486 aa20.25■□□□□ 0.83
PPP4R1-208ENST00000578178 CADPSQ9ULU8 1353 aa20.22■□□□□ 0.83
PPP4R1-208ENST00000578178 KIF21AQ7Z4S6 1674 aa20.21■□□□□ 0.83
PPP4R1-208ENST00000578178 PDS5BQ9NTI5 1447 aa20.19■□□□□ 0.82
PPP4R1-208ENST00000578178 THOC2Q8NI27 1593 aaKnown RBP20.19■□□□□ 0.82
PPP4R1-208ENST00000578178 CFTRP13569 1480 aa20.1■□□□□ 0.81
PPP4R1-208ENST00000578178 CCDC88BA6NC98 1476 aa20.03■□□□□ 0.8
PPP4R1-208ENST00000578178 MRC2Q9UBG0 1479 aa20.03■□□□□ 0.8
PPP4R1-208ENST00000578178 CEP164Q9UPV0 1460 aa20.03■□□□□ 0.8
PPP4R1-208ENST00000578178 PRDM2Q13029 1718 aa20.02■□□□□ 0.8
PPP4R1-208ENST00000578178 FANCD2Q9BXW9 1451 aa20.02■□□□□ 0.8
PPP4R1-208ENST00000578178 WDR62O43379 1518 aa19.99■□□□□ 0.79
PPP4R1-208ENST00000578178 URB2Q14146 1524 aaKnown RBP19.83■□□□□ 0.77
PPP4R1-208ENST00000578178 SUPT5HO00267 1087 aaKnown RBP19.73■□□□□ 0.75
PPP4R1-208ENST00000578178 DNAJC5Q9H3Z4 198 aa19.72■□□□□ 0.75
PPP4R1-208ENST00000578178 TOPBP1Q92547 1522 aa19.69■□□□□ 0.74
PPP4R1-208ENST00000578178 DNMBPQ6XZF7 1577 aa19.68■□□□□ 0.74
PPP4R1-208ENST00000578178 ABCC8Q09428 1581 aa19.67■□□□□ 0.74
PPP4R1-208ENST00000578178 IFT140Q96RY7 1462 aa19.6■□□□□ 0.73
PPP4R1-208ENST00000578178 POLA1P09884 1462 aaPredicted RBP19.52■□□□□ 0.72
PPP4R1-208ENST00000578178 TARBP1Q13395 1621 aaKnown RBP19.51■□□□□ 0.71
PPP4R1-208ENST00000578178 ZNF608Q9ULD9 1512 aaPredicted RBP19.51■□□□□ 0.71
PPP4R1-208ENST00000578178 EIF4G3O43432 1585 aaKnown RBP19.49■□□□□ 0.71
PPP4R1-208ENST00000578178 CUX1P39880 1505 aa19.48■□□□□ 0.71
PPP4R1-208ENST00000578178 FGD5Q6ZNL6 1462 aa19.44■□□□□ 0.7
PPP4R1-208ENST00000578178 RAD54L2Q9Y4B4 1467 aa19.4■□□□□ 0.7
PPP4R1-208ENST00000578178 WDR97A6NE52 1622 aa19.38■□□□□ 0.69
PPP4R1-208ENST00000578178 SOGA1O94964 1423 aa19.38■□□□□ 0.69
PPP4R1-208ENST00000578178 AQRO60306 1485 aaKnown RBP eCLIP19.35■□□□□ 0.697e-12■■□□□ 13.1
PPP4R1-208ENST00000578178 BIVM-ERCC5R4GMW8 1640 aa19.31■□□□□ 0.68
PPP4R1-208ENST00000578178 TOP2BQ02880 1626 aa19.29■□□□□ 0.68
PPP4R1-208ENST00000578178 WRNQ14191 1432 aaPredicted RBP eCLIP19.29■□□□□ 0.68
PPP4R1-208ENST00000578178 OSCARQ8IYS5 282 aa19.29■□□□□ 0.68
PPP4R1-208ENST00000578178 TDRD9Q8NDG6 1382 aaKnown RBP19.29■□□□□ 0.68
PPP4R1-208ENST00000578178 SYNJ1O43426 1573 aa19.27■□□□□ 0.68
PPP4R1-208ENST00000578178 CHD1O14646 1710 aa19.27■□□□□ 0.68
PPP4R1-208ENST00000578178 ABCA10Q8WWZ4 1543 aa19.25■□□□□ 0.67
PPP4R1-208ENST00000578178 SNAPC4Q5SXM2 1469 aa19.22■□□□□ 0.67
PPP4R1-208ENST00000578178 ABCA5Q8WWZ7 1642 aa19.22■□□□□ 0.67
PPP4R1-208ENST00000578178 PBRM1Q86U86 1689 aa19.22■□□□□ 0.67
PPP4R1-208ENST00000578178 GRIN2BQ13224 1484 aa19.22■□□□□ 0.67
PPP4R1-208ENST00000578178 MAGI1Q96QZ7 1491 aaPredicted RBP19.21■□□□□ 0.67
PPP4R1-208ENST00000578178 GAPVD1Q14C86 1478 aa19.19■□□□□ 0.66
PPP4R1-208ENST00000578178 SYNJ2O15056 1496 aa19.12■□□□□ 0.65
PPP4R1-208ENST00000578178 FBLN2P98095 1184 aa19.11■□□□□ 0.65
PPP4R1-208ENST00000578178 RIMBP3CA6NJZ7 1639 aa19.1■□□□□ 0.65
PPP4R1-208ENST00000578178 RIMBP3BA6NNM3 1639 aa19.1■□□□□ 0.65
PPP4R1-208ENST00000578178 RIMBP3Q9UFD9 1639 aa19.1■□□□□ 0.65
PPP4R1-208ENST00000578178 ARHGEF11O15085 1522 aa19.07■□□□□ 0.64
PPP4R1-208ENST00000578178 ADAMTS12P58397 1594 aa19.06■□□□□ 0.64
PPP4R1-208ENST00000578178 CHMP7Q8WUX9 453 aaPredicted RBP19.05■□□□□ 0.64
PPP4R1-208ENST00000578178 CLASP1Q7Z460 1538 aa19.05■□□□□ 0.64
PPP4R1-208ENST00000578178 ERICH3Q5RHP9 1530 aa19.03■□□□□ 0.64
PPP4R1-208ENST00000578178 TRIM41Q8WV44 630 aa19■□□□□ 0.63
PPP4R1-208ENST00000578178 GRIN2AQ12879 1464 aa18.98■□□□□ 0.63
PPP4R1-208ENST00000578178 FHAD1B1AJZ9 1412 aa18.96■□□□□ 0.63
PPP4R1-208ENST00000578178 CEP170Q5SW79 1584 aa18.91■□□□□ 0.62
PPP4R1-208ENST00000578178 NUP160Q12769 1436 aa18.91■□□□□ 0.62
PPP4R1-208ENST00000578178 ARAP1Q96P48 1450 aa18.9■□□□□ 0.62
PPP4R1-208ENST00000578178 KIF27Q86VH2 1401 aa18.9■□□□□ 0.62
PPP4R1-208ENST00000578178 CUL7Q14999 1698 aa18.85■□□□□ 0.61
PPP4R1-208ENST00000578178 CYB5RLQ6IPT4 315 aa18.81■□□□□ 0.6
PPP4R1-208ENST00000578178 SHROOM2Q13796 1616 aa18.81■□□□□ 0.6
PPP4R1-208ENST00000578178 IGF1RP08069 1367 aa18.79■□□□□ 0.6
PPP4R1-208ENST00000578178 RUSC2Q8N2Y8 1516 aa18.79■□□□□ 0.6
PPP4R1-208ENST00000578178 ERCC6L2Q5T890 1561 aa18.74■□□□□ 0.59
PPP4R1-208ENST00000578178 CARMIL1Q5VZK9 1371 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms