RNA–Protein interactions for RNA: ENST00000525874.1

SYVN1-205, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-205ENST00000525874 NISCHQ9Y2I1 1504 aa28.06■■■□□ 2.08
SYVN1-205ENST00000525874 ABCC9O60706 1549 aa25.44■■□□□ 1.66
SYVN1-205ENST00000525874 CCDC180Q9P1Z9 1646 aa25.26■■□□□ 1.63
SYVN1-205ENST00000525874 RB1CC1Q8TDY2 1594 aa24.14■■□□□ 1.45
SYVN1-205ENST00000525874 DNAJC5BQ9UF47 199 aa24.05■■□□□ 1.44
SYVN1-205ENST00000525874 NACADO15069 1562 aa23.93■■□□□ 1.42
SYVN1-205ENST00000525874 DCAF8L2P0C7V8 631 aa23.76■■□□□ 1.39
SYVN1-205ENST00000525874 PABPN1Q86U42 306 aaKnown RBP eCLIP23.66■■□□□ 1.38
SYVN1-205ENST00000525874 UNC13AQ9UPW8 1703 aa23.61■■□□□ 1.37
SYVN1-205ENST00000525874 MYO15BQ96JP2 1530 aa23.54■■□□□ 1.36
SYVN1-205ENST00000525874 BICRAQ9NZM4 1560 aa23.45■■□□□ 1.34
SYVN1-205ENST00000525874 ZCCHC6Q5VYS8 1495 aaKnown RBP23.21■■□□□ 1.31
SYVN1-205ENST00000525874 DCAF1Q9Y4B6 1507 aa23.17■■□□□ 1.3
SYVN1-205ENST00000525874 SHROOM4Q9ULL8 1493 aa23.11■■□□□ 1.29
SYVN1-205ENST00000525874 SCRIBQ14160 1630 aa23■■□□□ 1.27
SYVN1-205ENST00000525874 CC2D2AQ9P2K1 1620 aa22.98■■□□□ 1.27
SYVN1-205ENST00000525874 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
SYVN1-205ENST00000525874 EIF4G1Q04637 1599 aaKnown RBP22.89■■□□□ 1.25
SYVN1-205ENST00000525874 DNAJC5Q9H3Z4 198 aa22.22■■□□□ 1.15
SYVN1-205ENST00000525874 NCAPD3P42695 1498 aa22.09■■□□□ 1.13
SYVN1-205ENST00000525874 CUX2O14529 1486 aa22.02■■□□□ 1.12
SYVN1-205ENST00000525874 ATAD2BQ9ULI0 1458 aa22■■□□□ 1.11
SYVN1-205ENST00000525874 ERCC6Q03468 1493 aa21.98■■□□□ 1.11
SYVN1-205ENST00000525874 SMARCA2P51531 1590 aa21.93■■□□□ 1.1
SYVN1-205ENST00000525874 SMARCA4P51532 1647 aa21.93■■□□□ 1.1
SYVN1-205ENST00000525874 HMGXB3Q12766 1538 aa21.91■■□□□ 1.1
SYVN1-205ENST00000525874 NESP48681 1621 aa21.8■■□□□ 1.08
SYVN1-205ENST00000525874 BAZ1AQ9NRL2 1556 aaPredicted RBP21.79■■□□□ 1.08
SYVN1-205ENST00000525874 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.08
SYVN1-205ENST00000525874 PEG3Q9GZU2 1588 aa21.73■■□□□ 1.07
SYVN1-205ENST00000525874 THOC2Q8NI27 1593 aaKnown RBP21.63■■□□□ 1.05
SYVN1-205ENST00000525874 LAMC3Q9Y6N6 1575 aa21.62■■□□□ 1.05
SYVN1-205ENST00000525874 MROH2BQ7Z745 1585 aa21.61■■□□□ 1.05
SYVN1-205ENST00000525874 KIF21AQ7Z4S6 1674 aa21.53■■□□□ 1.04
SYVN1-205ENST00000525874 PDS5BQ9NTI5 1447 aa21.5■■□□□ 1.03
SYVN1-205ENST00000525874 CADPSQ9ULU8 1353 aa21.41■■□□□ 1.02
SYVN1-205ENST00000525874 WIZO95785 1651 aa21.35■■□□□ 1.01
SYVN1-205ENST00000525874 MRC2Q9UBG0 1479 aa21.33■■□□□ 1.01
SYVN1-205ENST00000525874 WDR62O43379 1518 aa21.29■■□□□ 1
SYVN1-205ENST00000525874 CEP164Q9UPV0 1460 aa21.2■□□□□ 0.98
SYVN1-205ENST00000525874 FANCD2Q9BXW9 1451 aa21.17■□□□□ 0.98
SYVN1-205ENST00000525874 TRIM41Q8WV44 630 aa21.16■□□□□ 0.98
SYVN1-205ENST00000525874 CFTRP13569 1480 aa21.13■□□□□ 0.97
SYVN1-205ENST00000525874 RSF1Q96T23 1441 aaPredicted RBP21.1■□□□□ 0.97
SYVN1-205ENST00000525874 TOP2AP11388 1531 aaKnown RBP21.07■□□□□ 0.96
SYVN1-205ENST00000525874 URB2Q14146 1524 aaKnown RBP21.01■□□□□ 0.95
SYVN1-205ENST00000525874 OSCARQ8IYS5 282 aa20.98■□□□□ 0.95
SYVN1-205ENST00000525874 PRDM2Q13029 1718 aa20.92■□□□□ 0.94
SYVN1-205ENST00000525874 CCDC88BA6NC98 1476 aa20.83■□□□□ 0.93
SYVN1-205ENST00000525874 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
SYVN1-205ENST00000525874 ZNF608Q9ULD9 1512 aaPredicted RBP20.78■□□□□ 0.92
SYVN1-205ENST00000525874 TOPBP1Q92547 1522 aa20.75■□□□□ 0.91
SYVN1-205ENST00000525874 RIMBP3CA6NJZ7 1639 aa20.72■□□□□ 0.91
SYVN1-205ENST00000525874 RIMBP3BA6NNM3 1639 aa20.72■□□□□ 0.91
SYVN1-205ENST00000525874 RIMBP3Q9UFD9 1639 aa20.72■□□□□ 0.91
SYVN1-205ENST00000525874 ABCC8Q09428 1581 aa20.69■□□□□ 0.9
SYVN1-205ENST00000525874 EIF4G3O43432 1585 aaKnown RBP20.66■□□□□ 0.9
SYVN1-205ENST00000525874 DNMBPQ6XZF7 1577 aa20.66■□□□□ 0.9
SYVN1-205ENST00000525874 ARHGEF11O15085 1522 aa20.64■□□□□ 0.9
SYVN1-205ENST00000525874 TARBP1Q13395 1621 aaKnown RBP20.58■□□□□ 0.89
SYVN1-205ENST00000525874 AQRO60306 1485 aaKnown RBP eCLIP20.57■□□□□ 0.886e-14■■■■■ 36.9
SYVN1-205ENST00000525874 CHD1O14646 1710 aa20.55■□□□□ 0.88
SYVN1-205ENST00000525874 POLA1P09884 1462 aaPredicted RBP20.52■□□□□ 0.88
SYVN1-205ENST00000525874 CYB5RLQ6IPT4 315 aa20.5■□□□□ 0.87
SYVN1-205ENST00000525874 FBLN2P98095 1184 aa20.47■□□□□ 0.87
SYVN1-205ENST00000525874 RAD54L2Q9Y4B4 1467 aa20.46■□□□□ 0.87
SYVN1-205ENST00000525874 SOGA1O94964 1423 aa20.43■□□□□ 0.86
SYVN1-205ENST00000525874 ARAP1Q96P48 1450 aa20.43■□□□□ 0.86
SYVN1-205ENST00000525874 TDRD9Q8NDG6 1382 aaKnown RBP20.41■□□□□ 0.86
SYVN1-205ENST00000525874 FGD5Q6ZNL6 1462 aa20.37■□□□□ 0.85
SYVN1-205ENST00000525874 WDR97A6NE52 1622 aa20.35■□□□□ 0.85
SYVN1-205ENST00000525874 SNAPC4Q5SXM2 1469 aa20.35■□□□□ 0.85
SYVN1-205ENST00000525874 TRHP20396 242 aaPredicted RBP20.32■□□□□ 0.84
SYVN1-205ENST00000525874 CUX1P39880 1505 aa20.32■□□□□ 0.84
SYVN1-205ENST00000525874 CLASP1Q7Z460 1538 aa20.31■□□□□ 0.84
SYVN1-205ENST00000525874 MAGI1Q96QZ7 1491 aaPredicted RBP20.3■□□□□ 0.84
SYVN1-205ENST00000525874 CHMP7Q8WUX9 453 aaPredicted RBP20.29■□□□□ 0.84
SYVN1-205ENST00000525874 SYNJ1O43426 1573 aa20.27■□□□□ 0.84
SYVN1-205ENST00000525874 GRIN2BQ13224 1484 aa20.27■□□□□ 0.84
SYVN1-205ENST00000525874 SYNJ2O15056 1496 aa20.23■□□□□ 0.83
SYVN1-205ENST00000525874 PBRM1Q86U86 1689 aa20.19■□□□□ 0.82
SYVN1-205ENST00000525874 GAPVD1Q14C86 1478 aa20.18■□□□□ 0.82
SYVN1-205ENST00000525874 ABCA10Q8WWZ4 1543 aa20.13■□□□□ 0.81
SYVN1-205ENST00000525874 ABCA5Q8WWZ7 1642 aa20.12■□□□□ 0.81
SYVN1-205ENST00000525874 SUPT5HO00267 1087 aaKnown RBP20.02■□□□□ 0.8
SYVN1-205ENST00000525874 GRIN2AQ12879 1464 aa20.01■□□□□ 0.79
SYVN1-205ENST00000525874 WRNQ14191 1432 aaPredicted RBP eCLIP20.01■□□□□ 0.79
SYVN1-205ENST00000525874 ADAMTS12P58397 1594 aa19.98■□□□□ 0.79
SYVN1-205ENST00000525874 ERCC6L2Q5T890 1561 aa19.97■□□□□ 0.79
SYVN1-205ENST00000525874 CEP170Q5SW79 1584 aa19.95■□□□□ 0.78
SYVN1-205ENST00000525874 NUP160Q12769 1436 aa19.95■□□□□ 0.78
SYVN1-205ENST00000525874 TOP2BQ02880 1626 aa19.94■□□□□ 0.78
SYVN1-205ENST00000525874 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
SYVN1-205ENST00000525874 FHAD1B1AJZ9 1412 aa19.91■□□□□ 0.78
SYVN1-205ENST00000525874 SHROOM2Q13796 1616 aa19.89■□□□□ 0.77
SYVN1-205ENST00000525874 ERICH3Q5RHP9 1530 aa19.87■□□□□ 0.77
SYVN1-205ENST00000525874 AEBP2Q6ZN18 517 aaPredicted RBP19.87■□□□□ 0.77
SYVN1-205ENST00000525874 PRG4Q92954 1404 aaPredicted RBP19.77■□□□□ 0.76
SYVN1-205ENST00000525874 JPH4Q96JJ6 628 aa19.75■□□□□ 0.75
SYVN1-205ENST00000525874 KIF13AQ9H1H9 1805 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms