RNA–Protein interactions for RNA: ENST00000580583.5

PPP4R1-217, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 5

Gene PPP4R1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-217ENST00000580583 NISCHQ9Y2I1 1504 aa14.1□□□□□ -0.15
PPP4R1-217ENST00000580583 AEBP2Q6ZN18 517 aaPredicted RBP13.07□□□□□ -0.32
PPP4R1-217ENST00000580583 CCDC180Q9P1Z9 1646 aa12.32□□□□□ -0.44
PPP4R1-217ENST00000580583 CHIC1Q5VXU3 224 aa12.24□□□□□ -0.45
PPP4R1-217ENST00000580583 ZCCHC6Q5VYS8 1495 aaKnown RBP11.91□□□□□ -0.5
PPP4R1-217ENST00000580583 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
PPP4R1-217ENST00000580583 DCAF1Q9Y4B6 1507 aa11.69□□□□□ -0.54
PPP4R1-217ENST00000580583 SHROOM4Q9ULL8 1493 aa11.53□□□□□ -0.56
PPP4R1-217ENST00000580583 MYO15BQ96JP2 1530 aa11.5□□□□□ -0.57
PPP4R1-217ENST00000580583 DCAF8L2P0C7V8 631 aa11.44□□□□□ -0.58
PPP4R1-217ENST00000580583 ABCC9O60706 1549 aa11.42□□□□□ -0.58
PPP4R1-217ENST00000580583 NACADO15069 1562 aa11.38□□□□□ -0.59
PPP4R1-217ENST00000580583 SENP3Q9H4L4 574 aaPredicted RBP11.36□□□□□ -0.59
PPP4R1-217ENST00000580583 SCRIBQ14160 1630 aa11.3□□□□□ -0.6
PPP4R1-217ENST00000580583 RB1CC1Q8TDY2 1594 aa11.26□□□□□ -0.61
PPP4R1-217ENST00000580583 SUPT5HO00267 1087 aaKnown RBP11.12□□□□□ -0.63
PPP4R1-217ENST00000580583 PHF23Q9BUL5 403 aaPredicted RBP11.03□□□□□ -0.64
PPP4R1-217ENST00000580583 UNC13AQ9UPW8 1703 aa11.03□□□□□ -0.64
PPP4R1-217ENST00000580583 RSF1Q96T23 1441 aaPredicted RBP10.96□□□□□ -0.65
PPP4R1-217ENST00000580583 CECR2Q9BXF3 1484 aa10.91□□□□□ -0.66
PPP4R1-217ENST00000580583 BAZ1AQ9NRL2 1556 aaPredicted RBP10.9□□□□□ -0.66
PPP4R1-217ENST00000580583 BICRAQ9NZM4 1560 aa10.9□□□□□ -0.67
PPP4R1-217ENST00000580583 MROH2BQ7Z745 1585 aa10.89□□□□□ -0.67
PPP4R1-217ENST00000580583 SMARCA4P51532 1647 aa10.84□□□□□ -0.67
PPP4R1-217ENST00000580583 WIZO95785 1651 aa10.82□□□□□ -0.68
PPP4R1-217ENST00000580583 TOP2AP11388 1531 aaKnown RBP10.75□□□□□ -0.69
PPP4R1-217ENST00000580583 PABPN1Q86U42 306 aaKnown RBP eCLIP10.72□□□□□ -0.69
PPP4R1-217ENST00000580583 PEG3Q9GZU2 1588 aa10.71□□□□□ -0.69
PPP4R1-217ENST00000580583 FOXD1Q16676 465 aa10.68□□□□□ -0.7
PPP4R1-217ENST00000580583 EIF4G1Q04637 1599 aaKnown RBP10.67□□□□□ -0.7
PPP4R1-217ENST00000580583 SMARCA2P51531 1590 aa10.64□□□□□ -0.71
PPP4R1-217ENST00000580583 ATAD2BQ9ULI0 1458 aa10.58□□□□□ -0.72
PPP4R1-217ENST00000580583 CCDC88BA6NC98 1476 aa10.57□□□□□ -0.72
PPP4R1-217ENST00000580583 BAZ1BQ9UIG0 1483 aaKnown RBP10.56□□□□□ -0.72
PPP4R1-217ENST00000580583 HMGXB3Q12766 1538 aa10.53□□□□□ -0.72
PPP4R1-217ENST00000580583 NCAPD3P42695 1498 aa10.46□□□□□ -0.74
PPP4R1-217ENST00000580583 TRIM41Q8WV44 630 aa10.45□□□□□ -0.74
PPP4R1-217ENST00000580583 MSH5O43196 834 aa10.44□□□□□ -0.74
PPP4R1-217ENST00000580583 ABCC8Q09428 1581 aa10.42□□□□□ -0.74
PPP4R1-217ENST00000580583 CC2D2AQ9P2K1 1620 aa10.36□□□□□ -0.75
PPP4R1-217ENST00000580583 WRNQ14191 1432 aaPredicted RBP eCLIP10.33□□□□□ -0.76
PPP4R1-217ENST00000580583 SYNJ1O43426 1573 aa10.32□□□□□ -0.76
PPP4R1-217ENST00000580583 PRDM2Q13029 1718 aa10.32□□□□□ -0.76
PPP4R1-217ENST00000580583 EEA1Q15075 1411 aa10.29□□□□□ -0.76
PPP4R1-217ENST00000580583 BIVM-ERCC5R4GMW8 1640 aa10.28□□□□□ -0.76
PPP4R1-217ENST00000580583 CFTRP13569 1480 aa10.28□□□□□ -0.76
PPP4R1-217ENST00000580583 TOP2BQ02880 1626 aa10.27□□□□□ -0.77
PPP4R1-217ENST00000580583 LOC105371045A0A1W2PR82 267 aa10.26□□□□□ -0.77
PPP4R1-217ENST00000580583 FAM9AQ8IZU1 332 aaPredicted RBP10.25□□□□□ -0.77
PPP4R1-217ENST00000580583 SOGA1O94964 1423 aa10.21□□□□□ -0.78
PPP4R1-217ENST00000580583 CUX1P39880 1505 aa10.19□□□□□ -0.78
PPP4R1-217ENST00000580583 CADPSQ9ULU8 1353 aa10.18□□□□□ -0.78
PPP4R1-217ENST00000580583 KIF21BO75037 1637 aa10.18□□□□□ -0.78
PPP4R1-217ENST00000580583 RUSC2Q8N2Y8 1516 aa10.16□□□□□ -0.78
PPP4R1-217ENST00000580583 GOLGA3Q08378 1498 aa10.16□□□□□ -0.78
PPP4R1-217ENST00000580583 CEP164Q9UPV0 1460 aa10.14□□□□□ -0.79
PPP4R1-217ENST00000580583 LAMC3Q9Y6N6 1575 aa10.13□□□□□ -0.79
PPP4R1-217ENST00000580583 FANCD2Q9BXW9 1451 aa10.11□□□□□ -0.79
PPP4R1-217ENST00000580583 CSRNP3Q8WYN3 585 aa10.1□□□□□ -0.79
PPP4R1-217ENST00000580583 EHMT2Q96KQ7 1210 aa10.09□□□□□ -0.79
PPP4R1-217ENST00000580583 TNIKQ9UKE5 1360 aa10.09□□□□□ -0.79
PPP4R1-217ENST00000580583 DNMBPQ6XZF7 1577 aa10.09□□□□□ -0.79
PPP4R1-217ENST00000580583 CEP162Q5TB80 1403 aa10.08□□□□□ -0.8
PPP4R1-217ENST00000580583 ERICH3Q5RHP9 1530 aa10.07□□□□□ -0.8
PPP4R1-217ENST00000580583 NESP48681 1621 aa10.07□□□□□ -0.8
PPP4R1-217ENST00000580583 FGD5Q6ZNL6 1462 aa10.06□□□□□ -0.8
PPP4R1-217ENST00000580583 KIF27Q86VH2 1401 aa10.06□□□□□ -0.8
PPP4R1-217ENST00000580583 PRXQ9BXM0 1461 aa10.03□□□□□ -0.8
PPP4R1-217ENST00000580583 RAPGEF2Q9Y4G8 1499 aa10.03□□□□□ -0.8
PPP4R1-217ENST00000580583 TOPBP1Q92547 1522 aa10.02□□□□□ -0.8
PPP4R1-217ENST00000580583 CUX2O14529 1486 aa10.01□□□□□ -0.81
PPP4R1-217ENST00000580583 PDS5BQ9NTI5 1447 aa10□□□□□ -0.81
PPP4R1-217ENST00000580583 KIF21AQ7Z4S6 1674 aa10□□□□□ -0.81
PPP4R1-217ENST00000580583 WDR97A6NE52 1622 aa9.99□□□□□ -0.81
PPP4R1-217ENST00000580583 POLA1P09884 1462 aaPredicted RBP9.98□□□□□ -0.81
PPP4R1-217ENST00000580583 URB2Q14146 1524 aaKnown RBP9.98□□□□□ -0.81
PPP4R1-217ENST00000580583 UBTFP17480 764 aaKnown RBP9.98□□□□□ -0.81
PPP4R1-217ENST00000580583 ABCA10Q8WWZ4 1543 aa9.97□□□□□ -0.81
PPP4R1-217ENST00000580583 CLIP1P30622 1438 aa9.97□□□□□ -0.81
PPP4R1-217ENST00000580583 PCGF6Q9BYE7 350 aa9.96□□□□□ -0.82
PPP4R1-217ENST00000580583 TRIM26Q12899 539 aaPredicted RBP9.95□□□□□ -0.82
PPP4R1-217ENST00000580583 CUL7Q14999 1698 aa9.93□□□□□ -0.82
PPP4R1-217ENST00000580583 ABCA5Q8WWZ7 1642 aa9.93□□□□□ -0.82
PPP4R1-217ENST00000580583 MRC2Q9UBG0 1479 aa9.91□□□□□ -0.82
PPP4R1-217ENST00000580583 RAD54L2Q9Y4B4 1467 aa9.91□□□□□ -0.82
PPP4R1-217ENST00000580583 VPS8Q8N3P4 1428 aa9.91□□□□□ -0.82
PPP4R1-217ENST00000580583 DNAJC5BQ9UF47 199 aa9.91□□□□□ -0.82
PPP4R1-217ENST00000580583 IGF1RP08069 1367 aa9.89□□□□□ -0.83
PPP4R1-217ENST00000580583 TARBP1Q13395 1621 aaKnown RBP9.88□□□□□ -0.83
PPP4R1-217ENST00000580583 WDR62O43379 1518 aa9.87□□□□□ -0.83
PPP4R1-217ENST00000580583 ARAP1Q96P48 1450 aa9.87□□□□□ -0.83
PPP4R1-217ENST00000580583 CARMIL1Q5VZK9 1371 aa9.87□□□□□ -0.83
PPP4R1-217ENST00000580583 CTTNBP2Q8WZ74 1663 aa9.84□□□□□ -0.83
PPP4R1-217ENST00000580583 PBRM1Q86U86 1689 aa9.83□□□□□ -0.84
PPP4R1-217ENST00000580583 HRCP23327 699 aa9.83□□□□□ -0.84
PPP4R1-217ENST00000580583 GAPVD1Q14C86 1478 aa9.83□□□□□ -0.84
PPP4R1-217ENST00000580583 THOC2Q8NI27 1593 aaKnown RBP9.83□□□□□ -0.84
PPP4R1-217ENST00000580583 ARHGAP35Q9NRY4 1499 aa9.82□□□□□ -0.84
PPP4R1-217ENST00000580583 EFCAB5A4FU69 1503 aa9.82□□□□□ -0.84
PPP4R1-217ENST00000580583 ADAMTS12P58397 1594 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms