RNA–Protein interactions for RNA: ENST00000478027.2

RPSA-207, Transcript of ribosomal protein SA, humanhuman

TSL 2

Gene RPSA, Length 1,227 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-207ENST00000478027 NISCHQ9Y2I1 1504 aa28.12■■■□□ 2.09
RPSA-207ENST00000478027 CCDC180Q9P1Z9 1646 aa25.08■■□□□ 1.61
RPSA-207ENST00000478027 ABCC9O60706 1549 aa24.42■■□□□ 1.5
RPSA-207ENST00000478027 RB1CC1Q8TDY2 1594 aa23.57■■□□□ 1.36
RPSA-207ENST00000478027 NACADO15069 1562 aa23.54■■□□□ 1.36
RPSA-207ENST00000478027 ZCCHC6Q5VYS8 1495 aaKnown RBP23.43■■□□□ 1.34
RPSA-207ENST00000478027 MYO15BQ96JP2 1530 aa23.42■■□□□ 1.34
RPSA-207ENST00000478027 DCAF8L2P0C7V8 631 aa23.36■■□□□ 1.33
RPSA-207ENST00000478027 DCAF1Q9Y4B6 1507 aa23.32■■□□□ 1.32
RPSA-207ENST00000478027 UNC13AQ9UPW8 1703 aa23.11■■□□□ 1.29
RPSA-207ENST00000478027 BICRAQ9NZM4 1560 aa22.84■■□□□ 1.25
RPSA-207ENST00000478027 SCRIBQ14160 1630 aa22.81■■□□□ 1.24
RPSA-207ENST00000478027 PABPN1Q86U42 306 aaKnown RBP eCLIP22.76■■□□□ 1.23
RPSA-207ENST00000478027 SHROOM4Q9ULL8 1493 aa22.65■■□□□ 1.22
RPSA-207ENST00000478027 CHIC1Q5VXU3 224 aa22.62■■□□□ 1.21
RPSA-207ENST00000478027 DNAJC5BQ9UF47 199 aa22.6■■□□□ 1.21
RPSA-207ENST00000478027 EIF4G1Q04637 1599 aaKnown RBP22.23■■□□□ 1.15
RPSA-207ENST00000478027 CC2D2AQ9P2K1 1620 aa22.15■■□□□ 1.14
RPSA-207ENST00000478027 AEBP2Q6ZN18 517 aaPredicted RBP22.13■■□□□ 1.13
RPSA-207ENST00000478027 CECR2Q9BXF3 1484 aa21.96■■□□□ 1.11
RPSA-207ENST00000478027 SMARCA4P51532 1647 aa21.85■■□□□ 1.09
RPSA-207ENST00000478027 BAZ1AQ9NRL2 1556 aaPredicted RBP21.82■■□□□ 1.08
RPSA-207ENST00000478027 SMARCA2P51531 1590 aa21.7■■□□□ 1.06
RPSA-207ENST00000478027 NCAPD3P42695 1498 aa21.69■■□□□ 1.06
RPSA-207ENST00000478027 ATAD2BQ9ULI0 1458 aa21.69■■□□□ 1.06
RPSA-207ENST00000478027 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
RPSA-207ENST00000478027 MROH2BQ7Z745 1585 aa21.65■■□□□ 1.06
RPSA-207ENST00000478027 HMGXB3Q12766 1538 aa21.62■■□□□ 1.05
RPSA-207ENST00000478027 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.03
RPSA-207ENST00000478027 WIZO95785 1651 aa21.45■■□□□ 1.02
RPSA-207ENST00000478027 RSF1Q96T23 1441 aaPredicted RBP21.39■■□□□ 1.02
RPSA-207ENST00000478027 TOP2AP11388 1531 aaKnown RBP21.23■□□□□ 0.99
RPSA-207ENST00000478027 LAMC3Q9Y6N6 1575 aa21.15■□□□□ 0.98
RPSA-207ENST00000478027 NESP48681 1621 aa21.14■□□□□ 0.97
RPSA-207ENST00000478027 ERCC6Q03468 1493 aa21.06■□□□□ 0.96
RPSA-207ENST00000478027 CADPSQ9ULU8 1353 aa21.03■□□□□ 0.96
RPSA-207ENST00000478027 KIF21AQ7Z4S6 1674 aa20.97■□□□□ 0.95
RPSA-207ENST00000478027 PDS5BQ9NTI5 1447 aa20.96■□□□□ 0.95
RPSA-207ENST00000478027 CCDC88BA6NC98 1476 aa20.94■□□□□ 0.94
RPSA-207ENST00000478027 CFTRP13569 1480 aa20.93■□□□□ 0.94
RPSA-207ENST00000478027 PRDM2Q13029 1718 aa20.9■□□□□ 0.94
RPSA-207ENST00000478027 THOC2Q8NI27 1593 aaKnown RBP20.89■□□□□ 0.94
RPSA-207ENST00000478027 CUX2O14529 1486 aa20.89■□□□□ 0.94
RPSA-207ENST00000478027 FANCD2Q9BXW9 1451 aa20.81■□□□□ 0.92
RPSA-207ENST00000478027 CEP164Q9UPV0 1460 aa20.78■□□□□ 0.92
RPSA-207ENST00000478027 SUPT5HO00267 1087 aaKnown RBP20.77■□□□□ 0.92
RPSA-207ENST00000478027 MRC2Q9UBG0 1479 aa20.75■□□□□ 0.91
RPSA-207ENST00000478027 DNAJC5Q9H3Z4 198 aa20.74■□□□□ 0.91
RPSA-207ENST00000478027 WDR62O43379 1518 aa20.72■□□□□ 0.91
RPSA-207ENST00000478027 URB2Q14146 1524 aaKnown RBP20.61■□□□□ 0.89
RPSA-207ENST00000478027 ABCC8Q09428 1581 aa20.5■□□□□ 0.87
RPSA-207ENST00000478027 TOPBP1Q92547 1522 aa20.48■□□□□ 0.87
RPSA-207ENST00000478027 DNMBPQ6XZF7 1577 aa20.48■□□□□ 0.87
RPSA-207ENST00000478027 IFT140Q96RY7 1462 aa20.35■□□□□ 0.85
RPSA-207ENST00000478027 CUX1P39880 1505 aa20.32■□□□□ 0.84
RPSA-207ENST00000478027 POLA1P09884 1462 aaPredicted RBP20.3■□□□□ 0.84
RPSA-207ENST00000478027 TARBP1Q13395 1621 aaKnown RBP20.3■□□□□ 0.84
RPSA-207ENST00000478027 FGD5Q6ZNL6 1462 aa20.24■□□□□ 0.83
RPSA-207ENST00000478027 ZNF608Q9ULD9 1512 aaPredicted RBP20.24■□□□□ 0.83
RPSA-207ENST00000478027 EIF4G3O43432 1585 aaKnown RBP20.21■□□□□ 0.83
RPSA-207ENST00000478027 BIVM-ERCC5R4GMW8 1640 aa20.2■□□□□ 0.82
RPSA-207ENST00000478027 SOGA1O94964 1423 aa20.19■□□□□ 0.82
RPSA-207ENST00000478027 TOP2BQ02880 1626 aa20.19■□□□□ 0.82
RPSA-207ENST00000478027 RAD54L2Q9Y4B4 1467 aa20.18■□□□□ 0.82
RPSA-207ENST00000478027 WRNQ14191 1432 aaPredicted RBP eCLIP20.18■□□□□ 0.82
RPSA-207ENST00000478027 WDR97A6NE52 1622 aa20.17■□□□□ 0.82
RPSA-207ENST00000478027 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
RPSA-207ENST00000478027 AQRO60306 1485 aaKnown RBP eCLIP20.11■□□□□ 0.81not detected■■■□□ 16.9
RPSA-207ENST00000478027 ABCA10Q8WWZ4 1543 aa20.07■□□□□ 0.8
RPSA-207ENST00000478027 TDRD9Q8NDG6 1382 aaKnown RBP20.06■□□□□ 0.8
RPSA-207ENST00000478027 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.8
RPSA-207ENST00000478027 PBRM1Q86U86 1689 aa20.01■□□□□ 0.79
RPSA-207ENST00000478027 CHD1O14646 1710 aa19.99■□□□□ 0.79
RPSA-207ENST00000478027 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
RPSA-207ENST00000478027 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
RPSA-207ENST00000478027 MAGI1Q96QZ7 1491 aaPredicted RBP19.95■□□□□ 0.78
RPSA-207ENST00000478027 OSCARQ8IYS5 282 aa19.95■□□□□ 0.78
RPSA-207ENST00000478027 SNAPC4Q5SXM2 1469 aa19.94■□□□□ 0.78
RPSA-207ENST00000478027 PHF23Q9BUL5 403 aaPredicted RBP19.87■□□□□ 0.77
RPSA-207ENST00000478027 SYNJ2O15056 1496 aa19.86■□□□□ 0.77
RPSA-207ENST00000478027 ERICH3Q5RHP9 1530 aa19.85■□□□□ 0.77
RPSA-207ENST00000478027 FBLN2P98095 1184 aa19.82■□□□□ 0.76
RPSA-207ENST00000478027 TRIM41Q8WV44 630 aa19.82■□□□□ 0.76
RPSA-207ENST00000478027 ADAMTS12P58397 1594 aa19.82■□□□□ 0.76
RPSA-207ENST00000478027 CHMP7Q8WUX9 453 aaPredicted RBP19.79■□□□□ 0.76
RPSA-207ENST00000478027 FHAD1B1AJZ9 1412 aa19.75■□□□□ 0.75
RPSA-207ENST00000478027 KIF27Q86VH2 1401 aa19.75■□□□□ 0.75
RPSA-207ENST00000478027 CLASP1Q7Z460 1538 aa19.74■□□□□ 0.75
RPSA-207ENST00000478027 GRIN2AQ12879 1464 aa19.73■□□□□ 0.75
RPSA-207ENST00000478027 RIMBP3CA6NJZ7 1639 aa19.7■□□□□ 0.74
RPSA-207ENST00000478027 RIMBP3BA6NNM3 1639 aa19.7■□□□□ 0.74
RPSA-207ENST00000478027 RIMBP3Q9UFD9 1639 aa19.7■□□□□ 0.74
RPSA-207ENST00000478027 CUL7Q14999 1698 aa19.7■□□□□ 0.74
RPSA-207ENST00000478027 ARHGEF11O15085 1522 aa19.68■□□□□ 0.74
RPSA-207ENST00000478027 IGF1RP08069 1367 aa19.66■□□□□ 0.74
RPSA-207ENST00000478027 NUP160Q12769 1436 aa19.65■□□□□ 0.74
RPSA-207ENST00000478027 CEP170Q5SW79 1584 aa19.65■□□□□ 0.74
RPSA-207ENST00000478027 RUSC2Q8N2Y8 1516 aa19.56■□□□□ 0.72
RPSA-207ENST00000478027 SHROOM2Q13796 1616 aa19.55■□□□□ 0.72
RPSA-207ENST00000478027 CARMIL1Q5VZK9 1371 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms