RNA–Protein interactions for RNA: ENST00000520950.5

TOP1MT-211, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 4

Gene TOP1MT, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-211ENST00000520950 NISCHQ9Y2I1 1504 aa28.13■■■□□ 2.09
TOP1MT-211ENST00000520950 ABCC9O60706 1549 aa25.67■■□□□ 1.7
TOP1MT-211ENST00000520950 CCDC180Q9P1Z9 1646 aa25.49■■□□□ 1.67
TOP1MT-211ENST00000520950 DNAJC5BQ9UF47 199 aa24.32■■□□□ 1.48
TOP1MT-211ENST00000520950 RB1CC1Q8TDY2 1594 aa24.3■■□□□ 1.48
TOP1MT-211ENST00000520950 NACADO15069 1562 aa24.05■■□□□ 1.44
TOP1MT-211ENST00000520950 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
TOP1MT-211ENST00000520950 BICRAQ9NZM4 1560 aa23.74■■□□□ 1.39
TOP1MT-211ENST00000520950 PABPN1Q86U42 306 aaKnown RBP eCLIP23.73■■□□□ 1.39
TOP1MT-211ENST00000520950 MYO15BQ96JP2 1530 aa23.63■■□□□ 1.37
TOP1MT-211ENST00000520950 DCAF8L2P0C7V8 631 aa23.59■■□□□ 1.37
TOP1MT-211ENST00000520950 ZCCHC6Q5VYS8 1495 aaKnown RBP23.3■■□□□ 1.32
TOP1MT-211ENST00000520950 DCAF1Q9Y4B6 1507 aa23.3■■□□□ 1.32
TOP1MT-211ENST00000520950 CC2D2AQ9P2K1 1620 aa23.25■■□□□ 1.31
TOP1MT-211ENST00000520950 SHROOM4Q9ULL8 1493 aa23.24■■□□□ 1.31
TOP1MT-211ENST00000520950 SCRIBQ14160 1630 aa23.19■■□□□ 1.3
TOP1MT-211ENST00000520950 CECR2Q9BXF3 1484 aa23.12■■□□□ 1.29
TOP1MT-211ENST00000520950 EIF4G1Q04637 1599 aaKnown RBP23.11■■□□□ 1.29
TOP1MT-211ENST00000520950 DNAJC5Q9H3Z4 198 aa22.44■■□□□ 1.18
TOP1MT-211ENST00000520950 CUX2O14529 1486 aa22.22■■□□□ 1.15
TOP1MT-211ENST00000520950 NCAPD3P42695 1498 aa22.16■■□□□ 1.14
TOP1MT-211ENST00000520950 ERCC6Q03468 1493 aa22.11■■□□□ 1.13
TOP1MT-211ENST00000520950 ATAD2BQ9ULI0 1458 aa22.09■■□□□ 1.13
TOP1MT-211ENST00000520950 SMARCA4P51532 1647 aa22.09■■□□□ 1.13
TOP1MT-211ENST00000520950 HMGXB3Q12766 1538 aa22.07■■□□□ 1.12
TOP1MT-211ENST00000520950 NESP48681 1621 aa22.02■■□□□ 1.12
TOP1MT-211ENST00000520950 SMARCA2P51531 1590 aa22■■□□□ 1.11
TOP1MT-211ENST00000520950 THOC2Q8NI27 1593 aaKnown RBP21.97■■□□□ 1.11
TOP1MT-211ENST00000520950 PEG3Q9GZU2 1588 aa21.87■■□□□ 1.09
TOP1MT-211ENST00000520950 KIF21AQ7Z4S6 1674 aa21.85■■□□□ 1.09
TOP1MT-211ENST00000520950 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
TOP1MT-211ENST00000520950 BAZ1AQ9NRL2 1556 aaPredicted RBP21.84■■□□□ 1.09
TOP1MT-211ENST00000520950 LAMC3Q9Y6N6 1575 aa21.78■■□□□ 1.08
TOP1MT-211ENST00000520950 MROH2BQ7Z745 1585 aa21.72■■□□□ 1.07
TOP1MT-211ENST00000520950 PDS5BQ9NTI5 1447 aa21.52■■□□□ 1.04
TOP1MT-211ENST00000520950 WDR62O43379 1518 aa21.5■■□□□ 1.03
TOP1MT-211ENST00000520950 WIZO95785 1651 aa21.5■■□□□ 1.03
TOP1MT-211ENST00000520950 MRC2Q9UBG0 1479 aa21.47■■□□□ 1.03
TOP1MT-211ENST00000520950 CADPSQ9ULU8 1353 aa21.42■■□□□ 1.02
TOP1MT-211ENST00000520950 TRIM41Q8WV44 630 aa21.32■■□□□ 1
TOP1MT-211ENST00000520950 CEP164Q9UPV0 1460 aa21.31■■□□□ 1
TOP1MT-211ENST00000520950 FANCD2Q9BXW9 1451 aa21.26■□□□□ 0.99
TOP1MT-211ENST00000520950 PRDM2Q13029 1718 aa21.19■□□□□ 0.98
TOP1MT-211ENST00000520950 CFTRP13569 1480 aa21.19■□□□□ 0.98
TOP1MT-211ENST00000520950 URB2Q14146 1524 aaKnown RBP21.18■□□□□ 0.98
TOP1MT-211ENST00000520950 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
TOP1MT-211ENST00000520950 RSF1Q96T23 1441 aaPredicted RBP21.14■□□□□ 0.98
TOP1MT-211ENST00000520950 RIMBP3CA6NJZ7 1639 aa21.04■□□□□ 0.96
TOP1MT-211ENST00000520950 RIMBP3BA6NNM3 1639 aa21.04■□□□□ 0.96
TOP1MT-211ENST00000520950 RIMBP3Q9UFD9 1639 aa21.04■□□□□ 0.96
TOP1MT-211ENST00000520950 OSCARQ8IYS5 282 aa20.96■□□□□ 0.95
TOP1MT-211ENST00000520950 ZNF608Q9ULD9 1512 aaPredicted RBP20.95■□□□□ 0.94
TOP1MT-211ENST00000520950 EIF4G3O43432 1585 aaKnown RBP20.9■□□□□ 0.94
TOP1MT-211ENST00000520950 ARHGEF11O15085 1522 aa20.88■□□□□ 0.93
TOP1MT-211ENST00000520950 IFT140Q96RY7 1462 aa20.87■□□□□ 0.93
TOP1MT-211ENST00000520950 TOPBP1Q92547 1522 aa20.86■□□□□ 0.93
TOP1MT-211ENST00000520950 CHD1O14646 1710 aa20.86■□□□□ 0.93
TOP1MT-211ENST00000520950 CCDC88BA6NC98 1476 aa20.85■□□□□ 0.93
TOP1MT-211ENST00000520950 DNMBPQ6XZF7 1577 aa20.78■□□□□ 0.92
TOP1MT-211ENST00000520950 TARBP1Q13395 1621 aaKnown RBP20.78■□□□□ 0.92
TOP1MT-211ENST00000520950 ABCC8Q09428 1581 aa20.72■□□□□ 0.91
TOP1MT-211ENST00000520950 ARAP1Q96P48 1450 aa20.68■□□□□ 0.9
TOP1MT-211ENST00000520950 AQRO60306 1485 aaKnown RBP eCLIP20.64■□□□□ 0.89
TOP1MT-211ENST00000520950 POLA1P09884 1462 aaPredicted RBP20.62■□□□□ 0.89
TOP1MT-211ENST00000520950 RAD54L2Q9Y4B4 1467 aa20.55■□□□□ 0.88
TOP1MT-211ENST00000520950 CLASP1Q7Z460 1538 aa20.53■□□□□ 0.88
TOP1MT-211ENST00000520950 CYB5RLQ6IPT4 315 aa20.53■□□□□ 0.88
TOP1MT-211ENST00000520950 WDR97A6NE52 1622 aa20.51■□□□□ 0.87
TOP1MT-211ENST00000520950 SNAPC4Q5SXM2 1469 aa20.49■□□□□ 0.87
TOP1MT-211ENST00000520950 FGD5Q6ZNL6 1462 aa20.45■□□□□ 0.86
TOP1MT-211ENST00000520950 CUX1P39880 1505 aa20.43■□□□□ 0.86
TOP1MT-211ENST00000520950 PBRM1Q86U86 1689 aa20.43■□□□□ 0.86
TOP1MT-211ENST00000520950 TDRD9Q8NDG6 1382 aaKnown RBP20.43■□□□□ 0.86
TOP1MT-211ENST00000520950 FBLN2P98095 1184 aa20.41■□□□□ 0.86
TOP1MT-211ENST00000520950 SOGA1O94964 1423 aa20.41■□□□□ 0.86
TOP1MT-211ENST00000520950 SYNJ1O43426 1573 aa20.41■□□□□ 0.86
TOP1MT-211ENST00000520950 MAGI1Q96QZ7 1491 aaPredicted RBP20.37■□□□□ 0.85
TOP1MT-211ENST00000520950 TRHP20396 242 aaPredicted RBP20.36■□□□□ 0.85
TOP1MT-211ENST00000520950 GRIN2BQ13224 1484 aa20.31■□□□□ 0.84
TOP1MT-211ENST00000520950 ABCA5Q8WWZ7 1642 aa20.31■□□□□ 0.84
TOP1MT-211ENST00000520950 SYNJ2O15056 1496 aa20.3■□□□□ 0.84
TOP1MT-211ENST00000520950 ERCC6L2Q5T890 1561 aa20.23■□□□□ 0.83
TOP1MT-211ENST00000520950 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
TOP1MT-211ENST00000520950 ABCA10Q8WWZ4 1543 aa20.19■□□□□ 0.82
TOP1MT-211ENST00000520950 CHMP7Q8WUX9 453 aaPredicted RBP20.19■□□□□ 0.82
TOP1MT-211ENST00000520950 ADAMTS12P58397 1594 aa20.17■□□□□ 0.82
TOP1MT-211ENST00000520950 CEP170Q5SW79 1584 aa20.15■□□□□ 0.82
TOP1MT-211ENST00000520950 SUPT5HO00267 1087 aaKnown RBP20.13■□□□□ 0.81
TOP1MT-211ENST00000520950 SHROOM2Q13796 1616 aa20.11■□□□□ 0.81
TOP1MT-211ENST00000520950 GRIN2AQ12879 1464 aa20.11■□□□□ 0.81
TOP1MT-211ENST00000520950 BIVM-ERCC5R4GMW8 1640 aa20.08■□□□□ 0.8
TOP1MT-211ENST00000520950 KIF13AQ9H1H9 1805 aa20.07■□□□□ 0.8
TOP1MT-211ENST00000520950 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
TOP1MT-211ENST00000520950 NUP160Q12769 1436 aa20.05■□□□□ 0.8
TOP1MT-211ENST00000520950 TOP2BQ02880 1626 aa20.01■□□□□ 0.79
TOP1MT-211ENST00000520950 AEBP2Q6ZN18 517 aaPredicted RBP19.94■□□□□ 0.78
TOP1MT-211ENST00000520950 ERICH3Q5RHP9 1530 aa19.92■□□□□ 0.78
TOP1MT-211ENST00000520950 FHAD1B1AJZ9 1412 aa19.92■□□□□ 0.78
TOP1MT-211ENST00000520950 RUSC2Q8N2Y8 1516 aa19.91■□□□□ 0.78
TOP1MT-211ENST00000520950 ADCY10Q96PN6 1610 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms