RNA–Protein interactions for RNA: ENST00000379238.5

UBAP2-204, Transcript of ubiquitin associated protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBAP2, Length 4,289 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP2-204ENST00000379238 NISCHQ9Y2I1 1504 aa15.41■□□□□ 0.06
UBAP2-204ENST00000379238 DCAF8L2P0C7V8 631 aa14.25□□□□□ -0.13
UBAP2-204ENST00000379238 ABCC9O60706 1549 aa13.33□□□□□ -0.28
UBAP2-204ENST00000379238 CCDC180Q9P1Z9 1646 aa13.24□□□□□ -0.29
UBAP2-204ENST00000379238 SHROOM4Q9ULL8 1493 aa13.24□□□□□ -0.29
UBAP2-204ENST00000379238 SUPT5HO00267 1087 aaKnown RBP13.02□□□□□ -0.32
UBAP2-204ENST00000379238 MYT1Q01538 1121 aa12.9□□□□□ -0.34
UBAP2-204ENST00000379238 PELP1Q8IZL8 1130 aaKnown RBP12.84□□□□□ -0.35
UBAP2-204ENST00000379238 PABPN1Q86U42 306 aaKnown RBP eCLIP12.79□□□□□ -0.36
UBAP2-204ENST00000379238 ZCCHC6Q5VYS8 1495 aaKnown RBP12.78□□□□□ -0.36
UBAP2-204ENST00000379238 RB1CC1Q8TDY2 1594 aa12.77□□□□□ -0.36
UBAP2-204ENST00000379238 NACADO15069 1562 aa12.72□□□□□ -0.37
UBAP2-204ENST00000379238 DCAF1Q9Y4B6 1507 aa12.55□□□□□ -0.4
UBAP2-204ENST00000379238 SCRIBQ14160 1630 aa12.53□□□□□ -0.4
UBAP2-204ENST00000379238 MYO15BQ96JP2 1530 aa12.46□□□□□ -0.41
UBAP2-204ENST00000379238 FAM9AQ8IZU1 332 aaPredicted RBP12.39□□□□□ -0.43
UBAP2-204ENST00000379238 TRIM41Q8WV44 630 aa12.28□□□□□ -0.44
UBAP2-204ENST00000379238 BAZ1AQ9NRL2 1556 aaPredicted RBP12.1□□□□□ -0.47
UBAP2-204ENST00000379238 APLP2Q06481 763 aa12.09□□□□□ -0.47
UBAP2-204ENST00000379238 EHMT2Q96KQ7 1210 aa12.09□□□□□ -0.47
UBAP2-204ENST00000379238 TTBK1Q5TCY1 1321 aaPredicted RBP12.09□□□□□ -0.47
UBAP2-204ENST00000379238 BAZ1BQ9UIG0 1483 aaKnown RBP12.06□□□□□ -0.48
UBAP2-204ENST00000379238 UBTFP17480 764 aaKnown RBP12.01□□□□□ -0.49
UBAP2-204ENST00000379238 RSF1Q96T23 1441 aaPredicted RBP11.99□□□□□ -0.49
UBAP2-204ENST00000379238 SMARCA2P51531 1590 aa11.97□□□□□ -0.49
UBAP2-204ENST00000379238 CECR2Q9BXF3 1484 aa11.95□□□□□ -0.5
UBAP2-204ENST00000379238 RANGAP1P46060 587 aaPredicted RBP11.9□□□□□ -0.5
UBAP2-204ENST00000379238 ERCC6Q03468 1493 aa11.87□□□□□ -0.51
UBAP2-204ENST00000379238 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
UBAP2-204ENST00000379238 ERICH6Q7L0X2 663 aa11.86□□□□□ -0.51
UBAP2-204ENST00000379238 CHIC1Q5VXU3 224 aa11.85□□□□□ -0.51
UBAP2-204ENST00000379238 FBLN2P98095 1184 aa11.84□□□□□ -0.51
UBAP2-204ENST00000379238 MROH2BQ7Z745 1585 aa11.82□□□□□ -0.52
UBAP2-204ENST00000379238 ATAD2BQ9ULI0 1458 aa11.81□□□□□ -0.52
UBAP2-204ENST00000379238 PDS5BQ9NTI5 1447 aa11.8□□□□□ -0.52
UBAP2-204ENST00000379238 EIF4G1Q04637 1599 aaKnown RBP11.78□□□□□ -0.52
UBAP2-204ENST00000379238 SMARCA4P51532 1647 aa11.77□□□□□ -0.53
UBAP2-204ENST00000379238 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.73□□□□□ -0.53
UBAP2-204ENST00000379238 HNRNPUL2Q1KMD3 747 aaKnown RBP11.73□□□□□ -0.53
UBAP2-204ENST00000379238 NCAPD3P42695 1498 aa11.73□□□□□ -0.53
UBAP2-204ENST00000379238 CADPSQ9ULU8 1353 aa11.71□□□□□ -0.54
UBAP2-204ENST00000379238 TOP2AP11388 1531 aaKnown RBP11.69□□□□□ -0.54
UBAP2-204ENST00000379238 BICRAQ9NZM4 1560 aa11.69□□□□□ -0.54
UBAP2-204ENST00000379238 CSRNP3Q8WYN3 585 aa11.67□□□□□ -0.54
UBAP2-204ENST00000379238 CHMP7Q8WUX9 453 aaPredicted RBP11.66□□□□□ -0.54
UBAP2-204ENST00000379238 WRNQ14191 1432 aaPredicted RBP eCLIP11.65□□□□□ -0.55
UBAP2-204ENST00000379238 CCDC88BA6NC98 1476 aa11.64□□□□□ -0.55
UBAP2-204ENST00000379238 CC2D2AQ9P2K1 1620 aa11.63□□□□□ -0.55
UBAP2-204ENST00000379238 ZEB1P37275 1124 aaPredicted RBP11.61□□□□□ -0.55
UBAP2-204ENST00000379238 WIZO95785 1651 aa11.61□□□□□ -0.55
UBAP2-204ENST00000379238 CEP164Q9UPV0 1460 aa11.57□□□□□ -0.56
UBAP2-204ENST00000379238 HMGXB3Q12766 1538 aa11.57□□□□□ -0.56
UBAP2-204ENST00000379238 NPM1P06748 294 aaKnown RBP eCLIP11.56□□□□□ -0.56
UBAP2-204ENST00000379238 KIF27Q86VH2 1401 aa11.55□□□□□ -0.56
UBAP2-204ENST00000379238 ABCC8Q09428 1581 aa11.54□□□□□ -0.56
UBAP2-204ENST00000379238 MYT1LQ9UL68 1186 aa11.54□□□□□ -0.56
UBAP2-204ENST00000379238 EEA1Q15075 1411 aa11.54□□□□□ -0.56
UBAP2-204ENST00000379238 DNAJC5BQ9UF47 199 aa11.53□□□□□ -0.56
UBAP2-204ENST00000379238 FANCD2Q9BXW9 1451 aa11.51□□□□□ -0.57
UBAP2-204ENST00000379238 UNC13AQ9UPW8 1703 aa11.5□□□□□ -0.57
UBAP2-204ENST00000379238 CDK11AQ9UQ88 783 aaPredicted RBP11.5□□□□□ -0.57
UBAP2-204ENST00000379238 LOC105371045A0A1W2PR82 267 aa11.49□□□□□ -0.57
UBAP2-204ENST00000379238 SOGA1O94964 1423 aa11.47□□□□□ -0.57
UBAP2-204ENST00000379238 CUX2O14529 1486 aa11.43□□□□□ -0.58
UBAP2-204ENST00000379238 CENPBP07199 599 aaPredicted RBP11.42□□□□□ -0.58
UBAP2-204ENST00000379238 P3H3Q8IVL6 736 aa11.42□□□□□ -0.58
UBAP2-204ENST00000379238 CFTRP13569 1480 aa11.4□□□□□ -0.58
UBAP2-204ENST00000379238 TDRD9Q8NDG6 1382 aaKnown RBP11.37□□□□□ -0.59
UBAP2-204ENST00000379238 PEG3Q9GZU2 1588 aa11.37□□□□□ -0.59
UBAP2-204ENST00000379238 CARMIL1Q5VZK9 1371 aa11.36□□□□□ -0.59
UBAP2-204ENST00000379238 MRC2Q9UBG0 1479 aa11.35□□□□□ -0.59
UBAP2-204ENST00000379238 LAMC3Q9Y6N6 1575 aa11.35□□□□□ -0.59
UBAP2-204ENST00000379238 GOLGA3Q08378 1498 aa11.32□□□□□ -0.6
UBAP2-204ENST00000379238 NESP48681 1621 aa11.32□□□□□ -0.6
UBAP2-204ENST00000379238 ARID3CA6NKF2 412 aa11.3□□□□□ -0.6
UBAP2-204ENST00000379238 OSCARQ8IYS5 282 aa11.3□□□□□ -0.6
UBAP2-204ENST00000379238 SLC24A1O60721 1099 aa11.29□□□□□ -0.6
UBAP2-204ENST00000379238 ITGAEP38570 1179 aa11.29□□□□□ -0.6
UBAP2-204ENST00000379238 PPARGC1BQ86YN6 1023 aaKnown RBP11.29□□□□□ -0.6
UBAP2-204ENST00000379238 CARMIL2Q6F5E8 1435 aa11.28□□□□□ -0.6
UBAP2-204ENST00000379238 PCGF6Q9BYE7 350 aa11.27□□□□□ -0.61
UBAP2-204ENST00000379238 FAM50AQ14320 339 aaKnown RBP11.26□□□□□ -0.61
UBAP2-204ENST00000379238 FGD5Q6ZNL6 1462 aa11.25□□□□□ -0.61
UBAP2-204ENST00000379238 PLEKHD1A6NEE1 506 aa11.25□□□□□ -0.61
UBAP2-204ENST00000379238 IFT140Q96RY7 1462 aa11.25□□□□□ -0.61
UBAP2-204ENST00000379238 CLIP1P30622 1438 aa11.24□□□□□ -0.61
UBAP2-204ENST00000379238 GAPVD1Q14C86 1478 aa11.22□□□□□ -0.61
UBAP2-204ENST00000379238 TRIM26Q12899 539 aaPredicted RBP11.21□□□□□ -0.62
UBAP2-204ENST00000379238 ZNF777Q9ULD5 760 aaPredicted RBP11.2□□□□□ -0.62
UBAP2-204ENST00000379238 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
UBAP2-204ENST00000379238 TNIKQ9UKE5 1360 aa11.19□□□□□ -0.62
UBAP2-204ENST00000379238 CCER1Q8TC90 406 aaPredicted RBP11.19□□□□□ -0.62
UBAP2-204ENST00000379238 MTUS2Q5JR59 1369 aa11.19□□□□□ -0.62
UBAP2-204ENST00000379238 HRCP23327 699 aa11.18□□□□□ -0.62
UBAP2-204ENST00000379238 ESF1Q9H501 851 aaKnown RBP11.18□□□□□ -0.62
UBAP2-204ENST00000379238 RAPGEF2Q9Y4G8 1499 aa11.18□□□□□ -0.62
UBAP2-204ENST00000379238 GRIN2BQ13224 1484 aa11.18□□□□□ -0.62
UBAP2-204ENST00000379238 JPH4Q96JJ6 628 aa11.17□□□□□ -0.62
UBAP2-204ENST00000379238 DNMBPQ6XZF7 1577 aa11.16□□□□□ -0.62
UBAP2-204ENST00000379238 RAD54L2Q9Y4B4 1467 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 93.4 ms