Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.29■■□□□ 1
SRPXP78539 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SRPXP78539 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
SRPXP78539 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
SRPXP78539 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
SRPXP78539 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
SRPXP78539 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.27■■□□□ 1
SRPXP78539 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.27■■□□□ 1
SRPXP78539 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SRPXP78539 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SRPXP78539 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
SRPXP78539 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SRPXP78539 PROC-203ENST00000409048 1586 ntTSL 5 BASIC21.26■□□□□ 0.99
SRPXP78539 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
SRPXP78539 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.25■□□□□ 0.99
SRPXP78539 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SRPXP78539 SHF-207ENST00000560540 2062 ntTSL 5 BASIC21.25■□□□□ 0.99
SRPXP78539 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.24■□□□□ 0.99
SRPXP78539 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.24■□□□□ 0.99
SRPXP78539 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SRPXP78539 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
SRPXP78539 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPXP78539 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
SRPXP78539 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPXP78539 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.23■□□□□ 0.99
SRPXP78539 AP004833.2-201ENST00000532228 1454 ntBASIC21.23■□□□□ 0.99
SRPXP78539 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
SRPXP78539 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRPXP78539 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
SRPXP78539 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SRPXP78539 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
SRPXP78539 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SRPXP78539 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SRPXP78539 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.21■□□□□ 0.99
SRPXP78539 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC21.21■□□□□ 0.99
SRPXP78539 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
SRPXP78539 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.2■□□□□ 0.98
SRPXP78539 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
SRPXP78539 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRPXP78539 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRPXP78539 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRPXP78539 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRPXP78539 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRPXP78539 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SRPXP78539 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRPXP78539 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SRPXP78539 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.18■□□□□ 0.98
SRPXP78539 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SRPXP78539 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPXP78539 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
SRPXP78539 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPXP78539 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SRPXP78539 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPXP78539 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRPXP78539 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPXP78539 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SRPXP78539 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SRPXP78539 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRPXP78539 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.16■□□□□ 0.98
SRPXP78539 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SRPXP78539 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SRPXP78539 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.15■□□□□ 0.98
SRPXP78539 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SRPXP78539 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
SRPXP78539 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.14■□□□□ 0.98
SRPXP78539 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.14■□□□□ 0.98
SRPXP78539 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
SRPXP78539 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
SRPXP78539 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SRPXP78539 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.14■□□□□ 0.97
SRPXP78539 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SRPXP78539 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SRPXP78539 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
SRPXP78539 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRPXP78539 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC21.12■□□□□ 0.97
SRPXP78539 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.12■□□□□ 0.97
SRPXP78539 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SRPXP78539 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SRPXP78539 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRPXP78539 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SRPXP78539 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SRPXP78539 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.1■□□□□ 0.97
SRPXP78539 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
SRPXP78539 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.09■□□□□ 0.97
SRPXP78539 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SRPXP78539 LINC01003-201ENST00000564834 1764 ntBASIC21.08■□□□□ 0.97
SRPXP78539 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SRPXP78539 AP002365.1-201ENST00000603448 772 ntBASIC21.08■□□□□ 0.97
SRPXP78539 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRPXP78539 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRPXP78539 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRPXP78539 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.07■□□□□ 0.96
SRPXP78539 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRPXP78539 SIGMAR1-205ENST00000477726 840 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRPXP78539 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SRPXP78539 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SRPXP78539 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC21.06■□□□□ 0.96
SRPXP78539 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRPXP78539 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
SRPXP78539 AL133380.1-201ENST00000506013 324 ntBASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms