RNA–Protein interactions for RNA: ENST00000356876.7

TNFRSF25-204, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-204ENST00000356876 NISCHQ9Y2I1 1504 aa59.42■■■■■ 7.1
TNFRSF25-204ENST00000356876 CCDC180Q9P1Z9 1646 aa51.98■■■■■ 5.91
TNFRSF25-204ENST00000356876 ZCCHC6Q5VYS8 1495 aaKnown RBP49.82■■■■■ 5.57
TNFRSF25-204ENST00000356876 ABCC9O60706 1549 aa49.49■■■■■ 5.51
TNFRSF25-204ENST00000356876 DCAF1Q9Y4B6 1507 aa49.19■■■■■ 5.46
TNFRSF25-204ENST00000356876 DCAF8L2P0C7V8 631 aa49.17■■■■■ 5.46
TNFRSF25-204ENST00000356876 MYO15BQ96JP2 1530 aa48.78■■■■■ 5.4
TNFRSF25-204ENST00000356876 NACADO15069 1562 aa48.56■■■■■ 5.36
TNFRSF25-204ENST00000356876 RB1CC1Q8TDY2 1594 aa48.22■■■■■ 5.31
TNFRSF25-204ENST00000356876 SHROOM4Q9ULL8 1493 aa48.09■■■■■ 5.29
TNFRSF25-204ENST00000356876 SCRIBQ14160 1630 aa47.67■■■■■ 5.22
TNFRSF25-204ENST00000356876 UNC13AQ9UPW8 1703 aa47.08■■■■■ 5.13
TNFRSF25-204ENST00000356876 BICRAQ9NZM4 1560 aa46.73■■■■■ 5.07
TNFRSF25-204ENST00000356876 PABPN1Q86U42 306 aaKnown RBP eCLIP46.61■■■■■ 5.05
TNFRSF25-204ENST00000356876 CECR2Q9BXF3 1484 aa46.16■■■■■ 4.98
TNFRSF25-204ENST00000356876 SUPT5HO00267 1087 aaKnown RBP46.12■■■■■ 4.97
TNFRSF25-204ENST00000356876 RSF1Q96T23 1441 aaPredicted RBP45.94■■■■■ 4.94
TNFRSF25-204ENST00000356876 BAZ1AQ9NRL2 1556 aaPredicted RBP45.92■■■■■ 4.94
TNFRSF25-204ENST00000356876 MROH2BQ7Z745 1585 aa45.85■■■■■ 4.93
TNFRSF25-204ENST00000356876 SMARCA4P51532 1647 aa45.72■■■■■ 4.91
TNFRSF25-204ENST00000356876 WIZO95785 1651 aa45.41■■■■■ 4.86
TNFRSF25-204ENST00000356876 EIF4G1Q04637 1599 aaKnown RBP45.36■■■■■ 4.85
TNFRSF25-204ENST00000356876 PEG3Q9GZU2 1588 aa45.24■■■■■ 4.83
TNFRSF25-204ENST00000356876 ATAD2BQ9ULI0 1458 aa45.12■■■■■ 4.81
TNFRSF25-204ENST00000356876 SMARCA2P51531 1590 aa45.09■■■■■ 4.81
TNFRSF25-204ENST00000356876 TOP2AP11388 1531 aaKnown RBP45■■■■■ 4.79
TNFRSF25-204ENST00000356876 NCAPD3P42695 1498 aa44.84■■■■■ 4.77
TNFRSF25-204ENST00000356876 BAZ1BQ9UIG0 1483 aaKnown RBP44.83■■■■■ 4.77
TNFRSF25-204ENST00000356876 CC2D2AQ9P2K1 1620 aa44.77■■■■■ 4.76
TNFRSF25-204ENST00000356876 HMGXB3Q12766 1538 aa44.71■■■■■ 4.75
TNFRSF25-204ENST00000356876 CCDC88BA6NC98 1476 aa44.54■■■■■ 4.72
TNFRSF25-204ENST00000356876 DNAJC5BQ9UF47 199 aa44.03■■■■■ 4.64
TNFRSF25-204ENST00000356876 CHIC1Q5VXU3 224 aa43.98■■■■■ 4.63
TNFRSF25-204ENST00000356876 CFTRP13569 1480 aa43.71■■■■■ 4.59
TNFRSF25-204ENST00000356876 CADPSQ9ULU8 1353 aa43.66■■■■■ 4.58
TNFRSF25-204ENST00000356876 TRIM41Q8WV44 630 aa43.45■■■■■ 4.55
TNFRSF25-204ENST00000356876 ABCC8Q09428 1581 aa43.39■■■■■ 4.54
TNFRSF25-204ENST00000356876 PRDM2Q13029 1718 aa43.34■■■■■ 4.53
TNFRSF25-204ENST00000356876 LAMC3Q9Y6N6 1575 aa43.34■■■■■ 4.53
TNFRSF25-204ENST00000356876 NESP48681 1621 aa43.31■■■■■ 4.52
TNFRSF25-204ENST00000356876 WRNQ14191 1432 aaPredicted RBP eCLIP43.25■■■■■ 4.51
TNFRSF25-204ENST00000356876 FANCD2Q9BXW9 1451 aa43.13■■■■■ 4.49
TNFRSF25-204ENST00000356876 PDS5BQ9NTI5 1447 aa43.06■■■■■ 4.48
TNFRSF25-204ENST00000356876 SYNJ1O43426 1573 aa43.03■■■■■ 4.48
TNFRSF25-204ENST00000356876 TOP2BQ02880 1626 aa42.93■■■■■ 4.46
TNFRSF25-204ENST00000356876 CUX1P39880 1505 aa42.9■■■■■ 4.46
TNFRSF25-204ENST00000356876 CEP164Q9UPV0 1460 aa42.9■■■■■ 4.46
TNFRSF25-204ENST00000356876 BIVM-ERCC5R4GMW8 1640 aa42.87■■■■■ 4.45
TNFRSF25-204ENST00000356876 KIF21AQ7Z4S6 1674 aa42.74■■■■■ 4.43
TNFRSF25-204ENST00000356876 DNMBPQ6XZF7 1577 aa42.66■■■■■ 4.42
TNFRSF25-204ENST00000356876 TOPBP1Q92547 1522 aa42.61■■■■■ 4.41
TNFRSF25-204ENST00000356876 URB2Q14146 1524 aaKnown RBP42.59■■■■■ 4.41
TNFRSF25-204ENST00000356876 FAM9AQ8IZU1 332 aaPredicted RBP42.57■■■■■ 4.4
TNFRSF25-204ENST00000356876 SOGA1O94964 1423 aa42.55■■■■■ 4.4
TNFRSF25-204ENST00000356876 ERCC6Q03468 1493 aa42.5■■■■■ 4.39
TNFRSF25-204ENST00000356876 FGD5Q6ZNL6 1462 aa42.5■■■■■ 4.39
TNFRSF25-204ENST00000356876 MRC2Q9UBG0 1479 aa42.49■■■■■ 4.39
TNFRSF25-204ENST00000356876 EEA1Q15075 1411 aa42.47■■■■■ 4.39
TNFRSF25-204ENST00000356876 RUSC2Q8N2Y8 1516 aa42.39■■■■■ 4.38
TNFRSF25-204ENST00000356876 POLA1P09884 1462 aaPredicted RBP42.38■■■■■ 4.37
TNFRSF25-204ENST00000356876 WDR62O43379 1518 aa42.27■■■■■ 4.36
TNFRSF25-204ENST00000356876 CSRNP3Q8WYN3 585 aa42.27■■■■■ 4.36
TNFRSF25-204ENST00000356876 LOC105371045A0A1W2PR82 267 aa42.24■■■■■ 4.35
TNFRSF25-204ENST00000356876 KIF27Q86VH2 1401 aa42.22■■■■■ 4.35
TNFRSF25-204ENST00000356876 RAD54L2Q9Y4B4 1467 aa42.21■■■■■ 4.35
TNFRSF25-204ENST00000356876 THOC2Q8NI27 1593 aaKnown RBP42.19■■■■■ 4.35
TNFRSF25-204ENST00000356876 CUX2O14529 1486 aa42.17■■■■■ 4.34
TNFRSF25-204ENST00000356876 ABCA10Q8WWZ4 1543 aa42.15■■■■■ 4.34
TNFRSF25-204ENST00000356876 TARBP1Q13395 1621 aaKnown RBP41.99■■■■■ 4.31
TNFRSF25-204ENST00000356876 WDR97A6NE52 1622 aa41.97■■■■■ 4.31
TNFRSF25-204ENST00000356876 IFT140Q96RY7 1462 aa41.93■■■■■ 4.3
TNFRSF25-204ENST00000356876 EHMT2Q96KQ7 1210 aa41.91■■■■■ 4.3
TNFRSF25-204ENST00000356876 IGF1RP08069 1367 aa41.9■■■■■ 4.3
TNFRSF25-204ENST00000356876 TDRD9Q8NDG6 1382 aaKnown RBP41.86■■■■■ 4.29
TNFRSF25-204ENST00000356876 KIF21BO75037 1637 aa41.86■■■■■ 4.29
TNFRSF25-204ENST00000356876 PRXQ9BXM0 1461 aa41.83■■■■■ 4.29
TNFRSF25-204ENST00000356876 GOLGA3Q08378 1498 aa41.81■■■■■ 4.28
TNFRSF25-204ENST00000356876 ABCA5Q8WWZ7 1642 aa41.8■■■■■ 4.28
TNFRSF25-204ENST00000356876 GAPVD1Q14C86 1478 aa41.78■■■■■ 4.28
TNFRSF25-204ENST00000356876 RAPGEF2Q9Y4G8 1499 aa41.7■■■■■ 4.27
TNFRSF25-204ENST00000356876 ERICH3Q5RHP9 1530 aa41.69■■■■■ 4.27
TNFRSF25-204ENST00000356876 CARMIL1Q5VZK9 1371 aa41.67■■■■■ 4.26
TNFRSF25-204ENST00000356876 AQRO60306 1485 aaKnown RBP eCLIP41.66■■■■■ 4.26
TNFRSF25-204ENST00000356876 UBTFP17480 764 aaKnown RBP41.66■■■■■ 4.26
TNFRSF25-204ENST00000356876 ZNF608Q9ULD9 1512 aaPredicted RBP41.65■■■■■ 4.26
TNFRSF25-204ENST00000356876 TNIKQ9UKE5 1360 aa41.64■■■■■ 4.26
TNFRSF25-204ENST00000356876 CUL7Q14999 1698 aa41.55■■■■■ 4.24
TNFRSF25-204ENST00000356876 GRIN2BQ13224 1484 aa41.53■■■■■ 4.24
TNFRSF25-204ENST00000356876 EIF4G3O43432 1585 aaKnown RBP41.48■■■■■ 4.23
TNFRSF25-204ENST00000356876 PBRM1Q86U86 1689 aa41.48■■■■■ 4.23
TNFRSF25-204ENST00000356876 FHAD1B1AJZ9 1412 aa41.34■■■■■ 4.21
TNFRSF25-204ENST00000356876 CEP162Q5TB80 1403 aa41.34■■■■■ 4.21
TNFRSF25-204ENST00000356876 ADAMTS12P58397 1594 aa41.28■■■■■ 4.2
TNFRSF25-204ENST00000356876 SNAPC4Q5SXM2 1469 aa41.26■■■■■ 4.2
TNFRSF25-204ENST00000356876 MAGI1Q96QZ7 1491 aaPredicted RBP41.22■■■■■ 4.19
TNFRSF25-204ENST00000356876 CLIP1P30622 1438 aa41.13■■■■■ 4.18
TNFRSF25-204ENST00000356876 SYNJ2O15056 1496 aa41.07■■■■■ 4.16
TNFRSF25-204ENST00000356876 RANGAP1P46060 587 aaPredicted RBP41.02■■■■■ 4.16
TNFRSF25-204ENST00000356876 CHMP7Q8WUX9 453 aaPredicted RBP41■■■■■ 4.15
TNFRSF25-204ENST00000356876 GRIN2AQ12879 1464 aa41■■■■■ 4.15
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms