RNA–Protein interactions for RNA: ENST00000532228.1

AP004833.2-201, humanhuman

BASIC

Gene AP004833.2, Length 1,454 nt, Biotype unprocessed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP004833.2-201ENST00000532228 NISCHQ9Y2I1 1504 aa59.44■■■■■ 7.11
AP004833.2-201ENST00000532228 CCDC180Q9P1Z9 1646 aa52.12■■■■■ 5.93
AP004833.2-201ENST00000532228 ZCCHC6Q5VYS8 1495 aaKnown RBP49.86■■■■■ 5.57
AP004833.2-201ENST00000532228 DCAF1Q9Y4B6 1507 aa49.35■■■■■ 5.49
AP004833.2-201ENST00000532228 ABCC9O60706 1549 aa49.35■■■■■ 5.49
AP004833.2-201ENST00000532228 MYO15BQ96JP2 1530 aa48.98■■■■■ 5.43
AP004833.2-201ENST00000532228 DCAF8L2P0C7V8 631 aa48.9■■■■■ 5.42
AP004833.2-201ENST00000532228 NACADO15069 1562 aa48.65■■■■■ 5.38
AP004833.2-201ENST00000532228 RB1CC1Q8TDY2 1594 aa48.28■■■■■ 5.32
AP004833.2-201ENST00000532228 SHROOM4Q9ULL8 1493 aa47.81■■■■■ 5.24
AP004833.2-201ENST00000532228 SCRIBQ14160 1630 aa47.58■■■■■ 5.21
AP004833.2-201ENST00000532228 UNC13AQ9UPW8 1703 aa47.06■■■■■ 5.12
AP004833.2-201ENST00000532228 BICRAQ9NZM4 1560 aa46.72■■■■■ 5.07
AP004833.2-201ENST00000532228 PABPN1Q86U42 306 aaKnown RBP eCLIP46.38■■■■■ 5.02
AP004833.2-201ENST00000532228 CECR2Q9BXF3 1484 aa46.06■■■■■ 4.96
AP004833.2-201ENST00000532228 BAZ1AQ9NRL2 1556 aaPredicted RBP45.97■■■■■ 4.95
AP004833.2-201ENST00000532228 RSF1Q96T23 1441 aaPredicted RBP45.91■■■■■ 4.94
AP004833.2-201ENST00000532228 SUPT5HO00267 1087 aaKnown RBP45.87■■■■■ 4.93
AP004833.2-201ENST00000532228 MROH2BQ7Z745 1585 aa45.79■■■■■ 4.92
AP004833.2-201ENST00000532228 SMARCA4P51532 1647 aa45.73■■■■■ 4.91
AP004833.2-201ENST00000532228 EIF4G1Q04637 1599 aaKnown RBP45.36■■■■■ 4.85
AP004833.2-201ENST00000532228 PEG3Q9GZU2 1588 aa45.34■■■■■ 4.85
AP004833.2-201ENST00000532228 WIZO95785 1651 aa45.33■■■■■ 4.85
AP004833.2-201ENST00000532228 SMARCA2P51531 1590 aa45.16■■■■■ 4.82
AP004833.2-201ENST00000532228 ATAD2BQ9ULI0 1458 aa45.12■■■■■ 4.81
AP004833.2-201ENST00000532228 TOP2AP11388 1531 aaKnown RBP45.02■■■■■ 4.8
AP004833.2-201ENST00000532228 NCAPD3P42695 1498 aa44.91■■■■■ 4.78
AP004833.2-201ENST00000532228 BAZ1BQ9UIG0 1483 aaKnown RBP44.82■■■■■ 4.76
AP004833.2-201ENST00000532228 HMGXB3Q12766 1538 aa44.8■■■■■ 4.76
AP004833.2-201ENST00000532228 CC2D2AQ9P2K1 1620 aa44.74■■■■■ 4.75
AP004833.2-201ENST00000532228 CCDC88BA6NC98 1476 aa44.48■■■■■ 4.71
AP004833.2-201ENST00000532228 CHIC1Q5VXU3 224 aa43.86■■■■■ 4.61
AP004833.2-201ENST00000532228 DNAJC5BQ9UF47 199 aa43.83■■■■■ 4.61
AP004833.2-201ENST00000532228 CFTRP13569 1480 aa43.75■■■■■ 4.59
AP004833.2-201ENST00000532228 CADPSQ9ULU8 1353 aa43.66■■■■■ 4.58
AP004833.2-201ENST00000532228 PRDM2Q13029 1718 aa43.43■■■■■ 4.54
AP004833.2-201ENST00000532228 LAMC3Q9Y6N6 1575 aa43.41■■■■■ 4.54
AP004833.2-201ENST00000532228 TRIM41Q8WV44 630 aa43.33■■■■■ 4.53
AP004833.2-201ENST00000532228 ABCC8Q09428 1581 aa43.27■■■■■ 4.52
AP004833.2-201ENST00000532228 WRNQ14191 1432 aaPredicted RBP eCLIP43.24■■■■■ 4.51
AP004833.2-201ENST00000532228 NESP48681 1621 aa43.18■■■■■ 4.5
AP004833.2-201ENST00000532228 FANCD2Q9BXW9 1451 aa43.11■■■■■ 4.49
AP004833.2-201ENST00000532228 PDS5BQ9NTI5 1447 aa43.09■■■■■ 4.49
AP004833.2-201ENST00000532228 SYNJ1O43426 1573 aa42.97■■■■■ 4.47
AP004833.2-201ENST00000532228 TOP2BQ02880 1626 aa42.96■■■■■ 4.47
AP004833.2-201ENST00000532228 BIVM-ERCC5R4GMW8 1640 aa42.92■■■■■ 4.46
AP004833.2-201ENST00000532228 CEP164Q9UPV0 1460 aa42.9■■■■■ 4.46
AP004833.2-201ENST00000532228 CUX1P39880 1505 aa42.86■■■■■ 4.45
AP004833.2-201ENST00000532228 DNMBPQ6XZF7 1577 aa42.69■■■■■ 4.42
AP004833.2-201ENST00000532228 KIF21AQ7Z4S6 1674 aa42.68■■■■■ 4.42
AP004833.2-201ENST00000532228 TOPBP1Q92547 1522 aa42.6■■■■■ 4.41
AP004833.2-201ENST00000532228 EEA1Q15075 1411 aa42.58■■■■■ 4.41
AP004833.2-201ENST00000532228 URB2Q14146 1524 aaKnown RBP42.55■■■■■ 4.4
AP004833.2-201ENST00000532228 MRC2Q9UBG0 1479 aa42.51■■■■■ 4.4
AP004833.2-201ENST00000532228 FGD5Q6ZNL6 1462 aa42.46■■■■■ 4.39
AP004833.2-201ENST00000532228 ERCC6Q03468 1493 aa42.44■■■■■ 4.38
AP004833.2-201ENST00000532228 SOGA1O94964 1423 aa42.44■■■■■ 4.38
AP004833.2-201ENST00000532228 POLA1P09884 1462 aaPredicted RBP42.35■■■■■ 4.37
AP004833.2-201ENST00000532228 WDR62O43379 1518 aa42.31■■■■■ 4.36
AP004833.2-201ENST00000532228 FAM9AQ8IZU1 332 aaPredicted RBP42.29■■■■■ 4.36
AP004833.2-201ENST00000532228 KIF27Q86VH2 1401 aa42.24■■■■■ 4.35
AP004833.2-201ENST00000532228 RUSC2Q8N2Y8 1516 aa42.23■■■■■ 4.35
AP004833.2-201ENST00000532228 CSRNP3Q8WYN3 585 aa42.21■■■■■ 4.35
AP004833.2-201ENST00000532228 THOC2Q8NI27 1593 aaKnown RBP42.2■■■■■ 4.35
AP004833.2-201ENST00000532228 ABCA10Q8WWZ4 1543 aa42.19■■■■■ 4.34
AP004833.2-201ENST00000532228 CUX2O14529 1486 aa42.1■■■■■ 4.33
AP004833.2-201ENST00000532228 RAD54L2Q9Y4B4 1467 aa42.1■■■■■ 4.33
AP004833.2-201ENST00000532228 WDR97A6NE52 1622 aa42.01■■■■■ 4.32
AP004833.2-201ENST00000532228 TARBP1Q13395 1621 aaKnown RBP42■■■■■ 4.31
AP004833.2-201ENST00000532228 LOC105371045A0A1W2PR82 267 aa41.98■■■■■ 4.31
AP004833.2-201ENST00000532228 IFT140Q96RY7 1462 aa41.97■■■■■ 4.31
AP004833.2-201ENST00000532228 KIF21BO75037 1637 aa41.91■■■■■ 4.3
AP004833.2-201ENST00000532228 IGF1RP08069 1367 aa41.86■■■■■ 4.29
AP004833.2-201ENST00000532228 PRXQ9BXM0 1461 aa41.84■■■■■ 4.29
AP004833.2-201ENST00000532228 GOLGA3Q08378 1498 aa41.82■■■■■ 4.29
AP004833.2-201ENST00000532228 ABCA5Q8WWZ7 1642 aa41.82■■■■■ 4.29
AP004833.2-201ENST00000532228 ERICH3Q5RHP9 1530 aa41.77■■■■■ 4.28
AP004833.2-201ENST00000532228 GAPVD1Q14C86 1478 aa41.76■■■■■ 4.28
AP004833.2-201ENST00000532228 TDRD9Q8NDG6 1382 aaKnown RBP41.74■■■■■ 4.27
AP004833.2-201ENST00000532228 TNIKQ9UKE5 1360 aa41.65■■■■■ 4.26
AP004833.2-201ENST00000532228 CARMIL1Q5VZK9 1371 aa41.63■■■■■ 4.26
AP004833.2-201ENST00000532228 CUL7Q14999 1698 aa41.62■■■■■ 4.25
AP004833.2-201ENST00000532228 RAPGEF2Q9Y4G8 1499 aa41.62■■■■■ 4.25
AP004833.2-201ENST00000532228 GRIN2BQ13224 1484 aa41.55■■■■■ 4.24
AP004833.2-201ENST00000532228 ZNF608Q9ULD9 1512 aaPredicted RBP41.55■■■■■ 4.24
AP004833.2-201ENST00000532228 AQRO60306 1485 aaKnown RBP eCLIP41.54■■■■■ 4.24
AP004833.2-201ENST00000532228 UBTFP17480 764 aaKnown RBP41.52■■■■■ 4.24
AP004833.2-201ENST00000532228 EHMT2Q96KQ7 1210 aa41.51■■■■■ 4.24
AP004833.2-201ENST00000532228 PBRM1Q86U86 1689 aa41.47■■■■■ 4.23
AP004833.2-201ENST00000532228 EIF4G3O43432 1585 aaKnown RBP41.46■■■■■ 4.23
AP004833.2-201ENST00000532228 FHAD1B1AJZ9 1412 aa41.36■■■■■ 4.21
AP004833.2-201ENST00000532228 ADAMTS12P58397 1594 aa41.29■■■■■ 4.2
AP004833.2-201ENST00000532228 MAGI1Q96QZ7 1491 aaPredicted RBP41.28■■■■■ 4.2
AP004833.2-201ENST00000532228 CEP162Q5TB80 1403 aa41.28■■■■■ 4.2
AP004833.2-201ENST00000532228 SNAPC4Q5SXM2 1469 aa41.2■■■■■ 4.19
AP004833.2-201ENST00000532228 CLIP1P30622 1438 aa41.09■■■■■ 4.17
AP004833.2-201ENST00000532228 SYNJ2O15056 1496 aa41.08■■■■■ 4.17
AP004833.2-201ENST00000532228 GRIN2AQ12879 1464 aa41■■■■■ 4.15
AP004833.2-201ENST00000532228 CTTNBP2Q8WZ74 1663 aa40.99■■■■■ 4.15
AP004833.2-201ENST00000532228 CHMP7Q8WUX9 453 aaPredicted RBP40.92■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms