RNA–Protein interactions for RNA: ENST00000396973.8

PCK2-202, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene PCK2, Length 1,830 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK2-202ENST00000396973 NISCHQ9Y2I1 1504 aa57.22■■■■■ 6.75
PCK2-202ENST00000396973 CCDC180Q9P1Z9 1646 aa49.78■■■■■ 5.56
PCK2-202ENST00000396973 ZCCHC6Q5VYS8 1495 aaKnown RBP48.11■■■■■ 5.29
PCK2-202ENST00000396973 DCAF1Q9Y4B6 1507 aa47.28■■■■■ 5.16
PCK2-202ENST00000396973 DCAF8L2P0C7V8 631 aa47.26■■■■■ 5.16
PCK2-202ENST00000396973 ABCC9O60706 1549 aa46.97■■■■■ 5.11
PCK2-202ENST00000396973 SHROOM4Q9ULL8 1493 aa46.87■■■■■ 5.09
PCK2-202ENST00000396973 MYO15BQ96JP2 1530 aa46.65■■■■■ 5.06
PCK2-202ENST00000396973 NACADO15069 1562 aa46.33■■■■■ 5.01
PCK2-202ENST00000396973 RB1CC1Q8TDY2 1594 aa45.9■■■■■ 4.94
PCK2-202ENST00000396973 SCRIBQ14160 1630 aa45.86■■■■■ 4.93
PCK2-202ENST00000396973 SUPT5HO00267 1087 aaKnown RBP45.19■■■■■ 4.82
PCK2-202ENST00000396973 UNC13AQ9UPW8 1703 aa45.01■■■■■ 4.8
PCK2-202ENST00000396973 BICRAQ9NZM4 1560 aa44.53■■■■■ 4.72
PCK2-202ENST00000396973 CECR2Q9BXF3 1484 aa44.47■■■■■ 4.71
PCK2-202ENST00000396973 RSF1Q96T23 1441 aaPredicted RBP44.47■■■■■ 4.71
PCK2-202ENST00000396973 PABPN1Q86U42 306 aaKnown RBP eCLIP44.35■■■■■ 4.69
PCK2-202ENST00000396973 MROH2BQ7Z745 1585 aa44.23■■■■■ 4.67
PCK2-202ENST00000396973 BAZ1AQ9NRL2 1556 aaPredicted RBP44.17■■■■■ 4.66
PCK2-202ENST00000396973 SMARCA4P51532 1647 aa43.96■■■■■ 4.63
PCK2-202ENST00000396973 WIZO95785 1651 aa43.89■■■■■ 4.62
PCK2-202ENST00000396973 TOP2AP11388 1531 aaKnown RBP43.42■■■■■ 4.54
PCK2-202ENST00000396973 PEG3Q9GZU2 1588 aa43.39■■■■■ 4.54
PCK2-202ENST00000396973 CHIC1Q5VXU3 224 aa43.32■■■■■ 4.53
PCK2-202ENST00000396973 ATAD2BQ9ULI0 1458 aa43.18■■■■■ 4.5
PCK2-202ENST00000396973 EIF4G1Q04637 1599 aaKnown RBP43.18■■■■■ 4.5
PCK2-202ENST00000396973 SMARCA2P51531 1590 aa43.16■■■■■ 4.5
PCK2-202ENST00000396973 CCDC88BA6NC98 1476 aa42.99■■■■■ 4.47
PCK2-202ENST00000396973 BAZ1BQ9UIG0 1483 aaKnown RBP42.97■■■■■ 4.47
PCK2-202ENST00000396973 NCAPD3P42695 1498 aa42.77■■■■■ 4.44
PCK2-202ENST00000396973 HMGXB3Q12766 1538 aa42.73■■■■■ 4.43
PCK2-202ENST00000396973 CC2D2AQ9P2K1 1620 aa42.5■■■■■ 4.39
PCK2-202ENST00000396973 TRIM41Q8WV44 630 aa42.46■■■■■ 4.39
PCK2-202ENST00000396973 ABCC8Q09428 1581 aa42.17■■■■■ 4.34
PCK2-202ENST00000396973 CFTRP13569 1480 aa41.88■■■■■ 4.29
PCK2-202ENST00000396973 WRNQ14191 1432 aaPredicted RBP eCLIP41.86■■■■■ 4.29
PCK2-202ENST00000396973 FAM9AQ8IZU1 332 aaPredicted RBP41.71■■■■■ 4.27
PCK2-202ENST00000396973 LOC105371045A0A1W2PR82 267 aa41.7■■■■■ 4.27
PCK2-202ENST00000396973 CADPSQ9ULU8 1353 aa41.7■■■■■ 4.27
PCK2-202ENST00000396973 SYNJ1O43426 1573 aa41.68■■■■■ 4.26
PCK2-202ENST00000396973 PRDM2Q13029 1718 aa41.67■■■■■ 4.26
PCK2-202ENST00000396973 TOP2BQ02880 1626 aa41.49■■■■■ 4.23
PCK2-202ENST00000396973 BIVM-ERCC5R4GMW8 1640 aa41.44■■■■■ 4.22
PCK2-202ENST00000396973 SOGA1O94964 1423 aa41.41■■■■■ 4.22
PCK2-202ENST00000396973 DNAJC5BQ9UF47 199 aa41.4■■■■■ 4.22
PCK2-202ENST00000396973 CUX1P39880 1505 aa41.34■■■■■ 4.21
PCK2-202ENST00000396973 EEA1Q15075 1411 aa41.34■■■■■ 4.21
PCK2-202ENST00000396973 NESP48681 1621 aa41.3■■■■■ 4.2
PCK2-202ENST00000396973 LAMC3Q9Y6N6 1575 aa41.29■■■■■ 4.2
PCK2-202ENST00000396973 FANCD2Q9BXW9 1451 aa41.25■■■■■ 4.19
PCK2-202ENST00000396973 RUSC2Q8N2Y8 1516 aa41.24■■■■■ 4.19
PCK2-202ENST00000396973 EHMT2Q96KQ7 1210 aa41.14■■■■■ 4.18
PCK2-202ENST00000396973 CSRNP3Q8WYN3 585 aa41.11■■■■■ 4.17
PCK2-202ENST00000396973 PDS5BQ9NTI5 1447 aa40.97■■■■■ 4.15
PCK2-202ENST00000396973 CEP164Q9UPV0 1460 aa40.97■■■■■ 4.15
PCK2-202ENST00000396973 DNMBPQ6XZF7 1577 aa40.91■■■■■ 4.14
PCK2-202ENST00000396973 FGD5Q6ZNL6 1462 aa40.87■■■■■ 4.13
PCK2-202ENST00000396973 TOPBP1Q92547 1522 aa40.82■■■■■ 4.13
PCK2-202ENST00000396973 KIF21BO75037 1637 aa40.8■■■■■ 4.12
PCK2-202ENST00000396973 KIF21AQ7Z4S6 1674 aa40.79■■■■■ 4.12
PCK2-202ENST00000396973 GOLGA3Q08378 1498 aa40.79■■■■■ 4.12
PCK2-202ENST00000396973 KIF27Q86VH2 1401 aa40.78■■■■■ 4.12
PCK2-202ENST00000396973 URB2Q14146 1524 aaKnown RBP40.73■■■■■ 4.11
PCK2-202ENST00000396973 TNIKQ9UKE5 1360 aa40.7■■■■■ 4.11
PCK2-202ENST00000396973 POLA1P09884 1462 aaPredicted RBP40.65■■■■■ 4.1
PCK2-202ENST00000396973 CUX2O14529 1486 aa40.64■■■■■ 4.1
PCK2-202ENST00000396973 UBTFP17480 764 aaKnown RBP40.63■■■■■ 4.1
PCK2-202ENST00000396973 RAPGEF2Q9Y4G8 1499 aa40.56■■■■■ 4.08
PCK2-202ENST00000396973 PRXQ9BXM0 1461 aa40.55■■■■■ 4.08
PCK2-202ENST00000396973 RAD54L2Q9Y4B4 1467 aa40.53■■■■■ 4.08
PCK2-202ENST00000396973 CEP162Q5TB80 1403 aa40.51■■■■■ 4.08
PCK2-202ENST00000396973 ABCA10Q8WWZ4 1543 aa40.5■■■■■ 4.07
PCK2-202ENST00000396973 ERICH3Q5RHP9 1530 aa40.49■■■■■ 4.07
PCK2-202ENST00000396973 MRC2Q9UBG0 1479 aa40.44■■■■■ 4.06
PCK2-202ENST00000396973 IGF1RP08069 1367 aa40.4■■■■■ 4.06
PCK2-202ENST00000396973 WDR97A6NE52 1622 aa40.34■■■■■ 4.05
PCK2-202ENST00000396973 ERCC6Q03468 1493 aa40.26■■■■■ 4.04
PCK2-202ENST00000396973 WDR62O43379 1518 aa40.22■■■■■ 4.03
PCK2-202ENST00000396973 CARMIL1Q5VZK9 1371 aa40.21■■■■■ 4.03
PCK2-202ENST00000396973 TARBP1Q13395 1621 aaKnown RBP40.19■■■■■ 4.02
PCK2-202ENST00000396973 ABCA5Q8WWZ7 1642 aa40.16■■■■■ 4.02
PCK2-202ENST00000396973 CLIP1P30622 1438 aa40.16■■■■■ 4.02
PCK2-202ENST00000396973 TDRD9Q8NDG6 1382 aaKnown RBP40.12■■■■■ 4.01
PCK2-202ENST00000396973 GAPVD1Q14C86 1478 aa40.07■■■■■ 4.01
PCK2-202ENST00000396973 CUL7Q14999 1698 aa40.07■■■■■ 4
PCK2-202ENST00000396973 THOC2Q8NI27 1593 aaKnown RBP40.06■■■■■ 4
PCK2-202ENST00000396973 PCGF6Q9BYE7 350 aa39.98■■■■□ 3.99
PCK2-202ENST00000396973 IFT140Q96RY7 1462 aa39.97■■■■□ 3.99
PCK2-202ENST00000396973 RANGAP1P46060 587 aaPredicted RBP39.95■■■■□ 3.99
PCK2-202ENST00000396973 TRIM26Q12899 539 aaPredicted RBP39.91■■■■□ 3.98
PCK2-202ENST00000396973 AQRO60306 1485 aaKnown RBP eCLIP39.83■■■■□ 3.975e-7■■■■■ 36
PCK2-202ENST00000396973 PBRM1Q86U86 1689 aa39.83■■■■□ 3.97
PCK2-202ENST00000396973 VPS8Q8N3P4 1428 aa39.82■■■■□ 3.97
PCK2-202ENST00000396973 ZNF608Q9ULD9 1512 aaPredicted RBP39.77■■■■□ 3.96
PCK2-202ENST00000396973 PPARGC1BQ86YN6 1023 aaKnown RBP39.75■■■■□ 3.95
PCK2-202ENST00000396973 ARAP1Q96P48 1450 aa39.74■■■■□ 3.95
PCK2-202ENST00000396973 GRIN2BQ13224 1484 aa39.72■■■■□ 3.95
PCK2-202ENST00000396973 ARHGAP35Q9NRY4 1499 aa39.69■■■■□ 3.94
PCK2-202ENST00000396973 CTTNBP2Q8WZ74 1663 aa39.66■■■■□ 3.94
PCK2-202ENST00000396973 FHAD1B1AJZ9 1412 aa39.64■■■■□ 3.94
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms