RNA–Protein interactions for RNA: ENST00000565677.5

STUB1-205, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 1 (best) BASIC

Gene STUB1, Length 1,560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-205ENST00000565677 NISCHQ9Y2I1 1504 aa61.54■■■■■ 7.44
STUB1-205ENST00000565677 CCDC180Q9P1Z9 1646 aa54.1■■■■■ 6.25
STUB1-205ENST00000565677 ABCC9O60706 1549 aa51.86■■■■■ 5.89
STUB1-205ENST00000565677 ZCCHC6Q5VYS8 1495 aaKnown RBP51.54■■■■■ 5.84
STUB1-205ENST00000565677 DCAF8L2P0C7V8 631 aa50.99■■■■■ 5.75
STUB1-205ENST00000565677 DCAF1Q9Y4B6 1507 aa50.9■■■■■ 5.74
STUB1-205ENST00000565677 MYO15BQ96JP2 1530 aa50.61■■■■■ 5.69
STUB1-205ENST00000565677 NACADO15069 1562 aa50.56■■■■■ 5.68
STUB1-205ENST00000565677 RB1CC1Q8TDY2 1594 aa50.32■■■■■ 5.65
STUB1-205ENST00000565677 SCRIBQ14160 1630 aa49.6■■■■■ 5.53
STUB1-205ENST00000565677 SHROOM4Q9ULL8 1493 aa49.55■■■■■ 5.52
STUB1-205ENST00000565677 UNC13AQ9UPW8 1703 aa49.3■■■■■ 5.48
STUB1-205ENST00000565677 BICRAQ9NZM4 1560 aa48.84■■■■■ 5.41
STUB1-205ENST00000565677 PABPN1Q86U42 306 aaKnown RBP eCLIP48.7■■■■■ 5.39
STUB1-205ENST00000565677 CECR2Q9BXF3 1484 aa47.88■■■■■ 5.26
STUB1-205ENST00000565677 BAZ1AQ9NRL2 1556 aaPredicted RBP47.58■■■■■ 5.21
STUB1-205ENST00000565677 MROH2BQ7Z745 1585 aa47.51■■■■■ 5.2
STUB1-205ENST00000565677 SMARCA4P51532 1647 aa47.5■■■■■ 5.2
STUB1-205ENST00000565677 EIF4G1Q04637 1599 aaKnown RBP47.43■■■■■ 5.18
STUB1-205ENST00000565677 RSF1Q96T23 1441 aaPredicted RBP47.39■■■■■ 5.18
STUB1-205ENST00000565677 SUPT5HO00267 1087 aaKnown RBP47.22■■■■■ 5.15
STUB1-205ENST00000565677 WIZO95785 1651 aa47.08■■■■■ 5.13
STUB1-205ENST00000565677 PEG3Q9GZU2 1588 aa46.96■■■■■ 5.11
STUB1-205ENST00000565677 CC2D2AQ9P2K1 1620 aa46.93■■■■■ 5.1
STUB1-205ENST00000565677 ATAD2BQ9ULI0 1458 aa46.92■■■■■ 5.1
STUB1-205ENST00000565677 SMARCA2P51531 1590 aa46.87■■■■■ 5.09
STUB1-205ENST00000565677 NCAPD3P42695 1498 aa46.65■■■■■ 5.06
STUB1-205ENST00000565677 BAZ1BQ9UIG0 1483 aaKnown RBP46.6■■■■■ 5.05
STUB1-205ENST00000565677 TOP2AP11388 1531 aaKnown RBP46.59■■■■■ 5.05
STUB1-205ENST00000565677 HMGXB3Q12766 1538 aa46.54■■■■■ 5.04
STUB1-205ENST00000565677 DNAJC5BQ9UF47 199 aa46.48■■■■■ 5.03
STUB1-205ENST00000565677 CCDC88BA6NC98 1476 aa46.07■■■■■ 4.97
STUB1-205ENST00000565677 CADPSQ9ULU8 1353 aa45.38■■■■■ 4.86
STUB1-205ENST00000565677 CFTRP13569 1480 aa45.38■■■■■ 4.86
STUB1-205ENST00000565677 NESP48681 1621 aa45.27■■■■■ 4.84
STUB1-205ENST00000565677 LAMC3Q9Y6N6 1575 aa45.22■■■■■ 4.83
STUB1-205ENST00000565677 PRDM2Q13029 1718 aa45.14■■■■■ 4.82
STUB1-205ENST00000565677 FANCD2Q9BXW9 1451 aa44.89■■■■■ 4.78
STUB1-205ENST00000565677 PDS5BQ9NTI5 1447 aa44.86■■■■■ 4.77
STUB1-205ENST00000565677 ABCC8Q09428 1581 aa44.84■■■■■ 4.77
STUB1-205ENST00000565677 CHIC1Q5VXU3 224 aa44.77■■■■■ 4.76
STUB1-205ENST00000565677 KIF21AQ7Z4S6 1674 aa44.75■■■■■ 4.75
STUB1-205ENST00000565677 CEP164Q9UPV0 1460 aa44.7■■■■■ 4.75
STUB1-205ENST00000565677 WRNQ14191 1432 aaPredicted RBP eCLIP44.63■■■■■ 4.74
STUB1-205ENST00000565677 ERCC6Q03468 1493 aa44.55■■■■■ 4.72
STUB1-205ENST00000565677 SYNJ1O43426 1573 aa44.52■■■■■ 4.72
STUB1-205ENST00000565677 CUX1P39880 1505 aa44.49■■■■■ 4.71
STUB1-205ENST00000565677 TRIM41Q8WV44 630 aa44.47■■■■■ 4.71
STUB1-205ENST00000565677 TOP2BQ02880 1626 aa44.4■■■■■ 4.7
STUB1-205ENST00000565677 URB2Q14146 1524 aaKnown RBP44.39■■■■■ 4.7
STUB1-205ENST00000565677 BIVM-ERCC5R4GMW8 1640 aa44.39■■■■■ 4.7
STUB1-205ENST00000565677 MRC2Q9UBG0 1479 aa44.36■■■■■ 4.69
STUB1-205ENST00000565677 DNMBPQ6XZF7 1577 aa44.36■■■■■ 4.69
STUB1-205ENST00000565677 TOPBP1Q92547 1522 aa44.32■■■■■ 4.69
STUB1-205ENST00000565677 THOC2Q8NI27 1593 aaKnown RBP44.26■■■■■ 4.68
STUB1-205ENST00000565677 WDR62O43379 1518 aa44.18■■■■■ 4.66
STUB1-205ENST00000565677 FGD5Q6ZNL6 1462 aa44.13■■■■■ 4.65
STUB1-205ENST00000565677 POLA1P09884 1462 aaPredicted RBP44.04■■■■■ 4.64
STUB1-205ENST00000565677 RAD54L2Q9Y4B4 1467 aa43.88■■■■■ 4.62
STUB1-205ENST00000565677 SOGA1O94964 1423 aa43.86■■■■■ 4.61
STUB1-205ENST00000565677 CUX2O14529 1486 aa43.84■■■■■ 4.61
STUB1-205ENST00000565677 TARBP1Q13395 1621 aaKnown RBP43.75■■■■■ 4.59
STUB1-205ENST00000565677 ABCA10Q8WWZ4 1543 aa43.72■■■■■ 4.59
STUB1-205ENST00000565677 WDR97A6NE52 1622 aa43.7■■■■■ 4.59
STUB1-205ENST00000565677 RUSC2Q8N2Y8 1516 aa43.7■■■■■ 4.59
STUB1-205ENST00000565677 IFT140Q96RY7 1462 aa43.69■■■■■ 4.58
STUB1-205ENST00000565677 FAM9AQ8IZU1 332 aaPredicted RBP43.63■■■■■ 4.57
STUB1-205ENST00000565677 KIF27Q86VH2 1401 aa43.57■■■■■ 4.57
STUB1-205ENST00000565677 EEA1Q15075 1411 aa43.53■■■■■ 4.56
STUB1-205ENST00000565677 TDRD9Q8NDG6 1382 aaKnown RBP43.51■■■■■ 4.56
STUB1-205ENST00000565677 ZNF608Q9ULD9 1512 aaPredicted RBP43.48■■■■■ 4.55
STUB1-205ENST00000565677 ABCA5Q8WWZ7 1642 aa43.46■■■■■ 4.55
STUB1-205ENST00000565677 AQRO60306 1485 aaKnown RBP eCLIP43.39■■■■■ 4.541e-6■■■■□ 24.9
STUB1-205ENST00000565677 GAPVD1Q14C86 1478 aa43.38■■■■■ 4.53
STUB1-205ENST00000565677 CSRNP3Q8WYN3 585 aa43.35■■■■■ 4.53
STUB1-205ENST00000565677 EIF4G3O43432 1585 aaKnown RBP43.34■■■■■ 4.53
STUB1-205ENST00000565677 IGF1RP08069 1367 aa43.27■■■■■ 4.52
STUB1-205ENST00000565677 PBRM1Q86U86 1689 aa43.23■■■■■ 4.51
STUB1-205ENST00000565677 ERICH3Q5RHP9 1530 aa43.19■■■■■ 4.51
STUB1-205ENST00000565677 GRIN2BQ13224 1484 aa43.18■■■■■ 4.5
STUB1-205ENST00000565677 PRXQ9BXM0 1461 aa43.08■■■■■ 4.49
STUB1-205ENST00000565677 CUL7Q14999 1698 aa43.05■■■■■ 4.48
STUB1-205ENST00000565677 KIF21BO75037 1637 aa43.05■■■■■ 4.48
STUB1-205ENST00000565677 CARMIL1Q5VZK9 1371 aa43.03■■■■■ 4.48
STUB1-205ENST00000565677 EHMT2Q96KQ7 1210 aa43.03■■■■■ 4.48
STUB1-205ENST00000565677 LOC105371045A0A1W2PR82 267 aa43.01■■■■■ 4.48
STUB1-205ENST00000565677 SNAPC4Q5SXM2 1469 aa43■■■■■ 4.47
STUB1-205ENST00000565677 RAPGEF2Q9Y4G8 1499 aa42.96■■■■■ 4.47
STUB1-205ENST00000565677 ADAMTS12P58397 1594 aa42.96■■■■■ 4.47
STUB1-205ENST00000565677 GOLGA3Q08378 1498 aa42.91■■■■■ 4.46
STUB1-205ENST00000565677 MAGI1Q96QZ7 1491 aaPredicted RBP42.91■■■■■ 4.46
STUB1-205ENST00000565677 FHAD1B1AJZ9 1412 aa42.89■■■■■ 4.46
STUB1-205ENST00000565677 SYNJ2O15056 1496 aa42.75■■■■■ 4.43
STUB1-205ENST00000565677 UBTFP17480 764 aaKnown RBP42.7■■■■■ 4.43
STUB1-205ENST00000565677 GRIN2AQ12879 1464 aa42.65■■■■■ 4.42
STUB1-205ENST00000565677 CHMP7Q8WUX9 453 aaPredicted RBP42.64■■■■■ 4.42
STUB1-205ENST00000565677 FBLN2P98095 1184 aa42.61■■■■■ 4.41
STUB1-205ENST00000565677 TNIKQ9UKE5 1360 aa42.59■■■■■ 4.41
STUB1-205ENST00000565677 CHD1O14646 1710 aa42.56■■■■■ 4.4
STUB1-205ENST00000565677 CTTNBP2Q8WZ74 1663 aa42.46■■■■■ 4.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms