RNA–Protein interactions for RNA: ENST00000428559.6

DERA-201, Transcript of deoxyribose-phosphate aldolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DERA, Length 1,705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DERA-201ENST00000428559 NISCHQ9Y2I1 1504 aa58.11■■■■■ 6.89
DERA-201ENST00000428559 CCDC180Q9P1Z9 1646 aa50.78■■■■■ 5.72
DERA-201ENST00000428559 ZCCHC6Q5VYS8 1495 aaKnown RBP48.81■■■■■ 5.4
DERA-201ENST00000428559 DCAF1Q9Y4B6 1507 aa48.15■■■■■ 5.3
DERA-201ENST00000428559 ABCC9O60706 1549 aa47.87■■■■■ 5.25
DERA-201ENST00000428559 DCAF8L2P0C7V8 631 aa47.81■■■■■ 5.24
DERA-201ENST00000428559 MYO15BQ96JP2 1530 aa47.63■■■■■ 5.21
DERA-201ENST00000428559 NACADO15069 1562 aa47.29■■■■■ 5.16
DERA-201ENST00000428559 SHROOM4Q9ULL8 1493 aa47.15■■■■■ 5.14
DERA-201ENST00000428559 RB1CC1Q8TDY2 1594 aa46.86■■■■■ 5.09
DERA-201ENST00000428559 SCRIBQ14160 1630 aa46.53■■■■■ 5.04
DERA-201ENST00000428559 UNC13AQ9UPW8 1703 aa45.9■■■■■ 4.94
DERA-201ENST00000428559 BICRAQ9NZM4 1560 aa45.41■■■■■ 4.86
DERA-201ENST00000428559 SUPT5HO00267 1087 aaKnown RBP45.38■■■■■ 4.85
DERA-201ENST00000428559 PABPN1Q86U42 306 aaKnown RBP eCLIP45.09■■■■■ 4.81
DERA-201ENST00000428559 CECR2Q9BXF3 1484 aa45.07■■■■■ 4.81
DERA-201ENST00000428559 RSF1Q96T23 1441 aaPredicted RBP45.02■■■■■ 4.8
DERA-201ENST00000428559 BAZ1AQ9NRL2 1556 aaPredicted RBP44.9■■■■■ 4.78
DERA-201ENST00000428559 MROH2BQ7Z745 1585 aa44.83■■■■■ 4.77
DERA-201ENST00000428559 SMARCA4P51532 1647 aa44.68■■■■■ 4.74
DERA-201ENST00000428559 WIZO95785 1651 aa44.47■■■■■ 4.71
DERA-201ENST00000428559 PEG3Q9GZU2 1588 aa44.21■■■■■ 4.67
DERA-201ENST00000428559 TOP2AP11388 1531 aaKnown RBP44.07■■■■■ 4.64
DERA-201ENST00000428559 EIF4G1Q04637 1599 aaKnown RBP44.05■■■■■ 4.64
DERA-201ENST00000428559 SMARCA2P51531 1590 aa43.97■■■■■ 4.63
DERA-201ENST00000428559 ATAD2BQ9ULI0 1458 aa43.94■■■■■ 4.63
DERA-201ENST00000428559 BAZ1BQ9UIG0 1483 aaKnown RBP43.68■■■■■ 4.58
DERA-201ENST00000428559 NCAPD3P42695 1498 aa43.62■■■■■ 4.57
DERA-201ENST00000428559 HMGXB3Q12766 1538 aa43.57■■■■■ 4.57
DERA-201ENST00000428559 CCDC88BA6NC98 1476 aa43.57■■■■■ 4.56
DERA-201ENST00000428559 CHIC1Q5VXU3 224 aa43.49■■■■■ 4.55
DERA-201ENST00000428559 CC2D2AQ9P2K1 1620 aa43.39■■■■■ 4.54
DERA-201ENST00000428559 TRIM41Q8WV44 630 aa42.75■■■■■ 4.43
DERA-201ENST00000428559 CFTRP13569 1480 aa42.62■■■■■ 4.41
DERA-201ENST00000428559 ABCC8Q09428 1581 aa42.58■■■■■ 4.41
DERA-201ENST00000428559 PRDM2Q13029 1718 aa42.47■■■■■ 4.39
DERA-201ENST00000428559 CADPSQ9ULU8 1353 aa42.47■■■■■ 4.39
DERA-201ENST00000428559 WRNQ14191 1432 aaPredicted RBP eCLIP42.38■■■■■ 4.38
DERA-201ENST00000428559 DNAJC5BQ9UF47 199 aa42.21■■■■■ 4.35
DERA-201ENST00000428559 SYNJ1O43426 1573 aa42.19■■■■■ 4.34
DERA-201ENST00000428559 LAMC3Q9Y6N6 1575 aa42.16■■■■■ 4.34
DERA-201ENST00000428559 TOP2BQ02880 1626 aa42.09■■■■■ 4.33
DERA-201ENST00000428559 BIVM-ERCC5R4GMW8 1640 aa42.07■■■■■ 4.32
DERA-201ENST00000428559 NESP48681 1621 aa42.01■■■■■ 4.32
DERA-201ENST00000428559 FANCD2Q9BXW9 1451 aa41.97■■■■■ 4.31
DERA-201ENST00000428559 CUX1P39880 1505 aa41.94■■■■■ 4.3
DERA-201ENST00000428559 FAM9AQ8IZU1 332 aaPredicted RBP41.84■■■■■ 4.29
DERA-201ENST00000428559 EEA1Q15075 1411 aa41.84■■■■■ 4.29
DERA-201ENST00000428559 PDS5BQ9NTI5 1447 aa41.8■■■■■ 4.28
DERA-201ENST00000428559 SOGA1O94964 1423 aa41.78■■■■■ 4.28
DERA-201ENST00000428559 LOC105371045A0A1W2PR82 267 aa41.74■■■■■ 4.27
DERA-201ENST00000428559 CEP164Q9UPV0 1460 aa41.73■■■■■ 4.27
DERA-201ENST00000428559 DNMBPQ6XZF7 1577 aa41.63■■■■■ 4.25
DERA-201ENST00000428559 RUSC2Q8N2Y8 1516 aa41.6■■■■■ 4.25
DERA-201ENST00000428559 KIF21AQ7Z4S6 1674 aa41.58■■■■■ 4.25
DERA-201ENST00000428559 TOPBP1Q92547 1522 aa41.52■■■■■ 4.24
DERA-201ENST00000428559 CSRNP3Q8WYN3 585 aa41.52■■■■■ 4.24
DERA-201ENST00000428559 FGD5Q6ZNL6 1462 aa41.48■■■■■ 4.23
DERA-201ENST00000428559 URB2Q14146 1524 aaKnown RBP41.43■■■■■ 4.22
DERA-201ENST00000428559 KIF27Q86VH2 1401 aa41.35■■■■■ 4.21
DERA-201ENST00000428559 POLA1P09884 1462 aaPredicted RBP41.31■■■■■ 4.2
DERA-201ENST00000428559 KIF21BO75037 1637 aa41.27■■■■■ 4.2
DERA-201ENST00000428559 MRC2Q9UBG0 1479 aa41.25■■■■■ 4.19
DERA-201ENST00000428559 CUX2O14529 1486 aa41.2■■■■■ 4.19
DERA-201ENST00000428559 GOLGA3Q08378 1498 aa41.19■■■■■ 4.18
DERA-201ENST00000428559 ABCA10Q8WWZ4 1543 aa41.17■■■■■ 4.18
DERA-201ENST00000428559 EHMT2Q96KQ7 1210 aa41.15■■■■■ 4.18
DERA-201ENST00000428559 RAD54L2Q9Y4B4 1467 aa41.11■■■■■ 4.17
DERA-201ENST00000428559 ERCC6Q03468 1493 aa41.09■■■■■ 4.17
DERA-201ENST00000428559 WDR62O43379 1518 aa41.06■■■■■ 4.16
DERA-201ENST00000428559 TNIKQ9UKE5 1360 aa41.06■■■■■ 4.16
DERA-201ENST00000428559 PRXQ9BXM0 1461 aa41.06■■■■■ 4.16
DERA-201ENST00000428559 WDR97A6NE52 1622 aa41.05■■■■■ 4.16
DERA-201ENST00000428559 ERICH3Q5RHP9 1530 aa41.02■■■■■ 4.16
DERA-201ENST00000428559 IGF1RP08069 1367 aa40.96■■■■■ 4.15
DERA-201ENST00000428559 RAPGEF2Q9Y4G8 1499 aa40.95■■■■■ 4.15
DERA-201ENST00000428559 TARBP1Q13395 1621 aaKnown RBP40.93■■■■■ 4.14
DERA-201ENST00000428559 THOC2Q8NI27 1593 aaKnown RBP40.93■■■■■ 4.14
DERA-201ENST00000428559 UBTFP17480 764 aaKnown RBP40.92■■■■■ 4.14
DERA-201ENST00000428559 ABCA5Q8WWZ7 1642 aa40.84■■■■■ 4.13
DERA-201ENST00000428559 CEP162Q5TB80 1403 aa40.78■■■■■ 4.12
DERA-201ENST00000428559 IFT140Q96RY7 1462 aa40.76■■■■■ 4.12
DERA-201ENST00000428559 CARMIL1Q5VZK9 1371 aa40.75■■■■■ 4.11
DERA-201ENST00000428559 GAPVD1Q14C86 1478 aa40.73■■■■■ 4.11
DERA-201ENST00000428559 TDRD9Q8NDG6 1382 aaKnown RBP40.72■■■■■ 4.11
DERA-201ENST00000428559 CUL7Q14999 1698 aa40.72■■■■■ 4.11
DERA-201ENST00000428559 PBRM1Q86U86 1689 aa40.53■■■■■ 4.08
DERA-201ENST00000428559 CLIP1P30622 1438 aa40.49■■■■■ 4.07
DERA-201ENST00000428559 AQRO60306 1485 aaKnown RBP eCLIP40.47■■■■■ 4.07
DERA-201ENST00000428559 ZNF608Q9ULD9 1512 aaPredicted RBP40.45■■■■■ 4.07
DERA-201ENST00000428559 GRIN2BQ13224 1484 aa40.44■■■■■ 4.06
DERA-201ENST00000428559 EIF4G3O43432 1585 aaKnown RBP40.36■■■■■ 4.05
DERA-201ENST00000428559 FHAD1B1AJZ9 1412 aa40.31■■■■■ 4.04
DERA-201ENST00000428559 ADAMTS12P58397 1594 aa40.3■■■■■ 4.04
DERA-201ENST00000428559 CTTNBP2Q8WZ74 1663 aa40.24■■■■■ 4.03
DERA-201ENST00000428559 VPS8Q8N3P4 1428 aa40.16■■■■■ 4.02
DERA-201ENST00000428559 RANGAP1P46060 587 aaPredicted RBP40.13■■■■■ 4.02
DERA-201ENST00000428559 MAGI1Q96QZ7 1491 aaPredicted RBP40.13■■■■■ 4.01
DERA-201ENST00000428559 SNAPC4Q5SXM2 1469 aa40.12■■■■■ 4.01
DERA-201ENST00000428559 ARHGAP35Q9NRY4 1499 aa40.12■■■■■ 4.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms