Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 ZNF3-215ENST00000487620 2660 ntTSL 27.33□□□□□ -1.242e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-207ENST00000424697 2718 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.362e-8■■□□□ 14.5
PRPF8Q6P2Q9 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.392e-8■■□□□ 14.5
PRPF8Q6P2Q9 EP400NL-209ENST00000488030 1366 ntTSL 215.09■□□□□ 0.012e-6■■□□□ 14.5
PRPF8Q6P2Q9 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.281e-7■■□□□ 14.5
PRPF8Q6P2Q9 NPEPL1-207ENST00000529976 4684 ntTSL 1 (best)13.67□□□□□ -0.221e-7■■□□□ 14.5
PRPF8Q6P2Q9 NPEPL1-206ENST00000527587 4633 ntTSL 513.09□□□□□ -0.311e-7■■□□□ 14.5
PRPF8Q6P2Q9 CLCN7-209ENST00000565092 2740 ntTSL 212.75□□□□□ -0.375e-7■■□□□ 14.5
PRPF8Q6P2Q9 CLCN7-205ENST00000563642 4184 ntTSL 211.31□□□□□ -0.65e-7■■□□□ 14.5
PRPF8Q6P2Q9 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.221e-6■■□□□ 14.5
PRPF8Q6P2Q9 SSR4-209ENST00000482902 2409 ntTSL 213.34□□□□□ -0.271e-6■■□□□ 14.5
PRPF8Q6P2Q9 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.291e-6■■□□□ 14.5
PRPF8Q6P2Q9 SSR4-208ENST00000471880 785 ntTSL 512.67□□□□□ -0.381e-6■■□□□ 14.5
PRPF8Q6P2Q9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.441e-6■■□□□ 14.5
PRPF8Q6P2Q9 SSR4-202ENST00000370085 526 ntTSL 2 BASIC11.56□□□□□ -0.561e-6■■□□□ 14.5
PRPF8Q6P2Q9 SSR4-206ENST00000460616 2482 ntTSL 211.27□□□□□ -0.611e-6■■□□□ 14.5
PRPF8Q6P2Q9 SSR4-211ENST00000486204 658 ntTSL 310.97□□□□□ -0.651e-6■■□□□ 14.5
PRPF8Q6P2Q9 SSR4-210ENST00000485612 701 ntTSL 210.94□□□□□ -0.661e-6■■□□□ 14.5
PRPF8Q6P2Q9 SF3A1-202ENST00000411423 548 ntTSL 416.17■□□□□ 0.182e-6■■□□□ 14.5
PRPF8Q6P2Q9 EDC4-208ENST00000574770 1425 ntTSL 511.93□□□□□ -0.59e-7■■□□□ 14.5
PRPF8Q6P2Q9 MAPK12-206ENST00000488504 1785 ntTSL 518.17■□□□□ 0.55e-8■■□□□ 14.5
PRPF8Q6P2Q9 STXBP2-214ENST00000599400 811 ntTSL 512.79□□□□□ -0.366e-8■■□□□ 14.5
PRPF8Q6P2Q9 STXBP2-219ENST00000600702 770 ntTSL 211.44□□□□□ -0.581e-7■■□□□ 14.5
PRPF8Q6P2Q9 DLG1-228ENST00000493937 207 ntTSL 36.75□□□□□ -1.335e-8■■□□□ 14.5
PRPF8Q6P2Q9 INSR-205ENST00000598216 2961 ntTSL 1 (best)9.86□□□□□ -0.833e-6■■□□□ 14.5
PRPF8Q6P2Q9 INSR-206ENST00000600492 653 ntTSL 58.68□□□□□ -1.023e-6■■□□□ 14.5
PRPF8Q6P2Q9 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.224e-23■■□□□ 14.5
PRPF8Q6P2Q9 HNRNPK-208ENST00000481820 957 ntTSL 24.12□□□□□ -1.754e-9■■□□□ 14.5
PRPF8Q6P2Q9 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.462e-9■■□□□ 14.5
PRPF8Q6P2Q9 RPS29-206ENST00000557111 488 ntTSL 2 BASIC14.71□□□□□ -0.052e-13■■□□□ 14.5
PRPF8Q6P2Q9 RPS29-207ENST00000557367 499 ntTSL 211.44□□□□□ -0.582e-13■■□□□ 14.5
PRPF8Q6P2Q9 RPS29-208ENST00000557519 333 ntTSL 38.3□□□□□ -1.082e-13■■□□□ 14.5
PRPF8Q6P2Q9 RPS29-204ENST00000554075 826 ntTSL 1 (best)6.92□□□□□ -1.32e-13■■□□□ 14.5
PRPF8Q6P2Q9 RPS29-205ENST00000556230 624 ntTSL 1 (best)6.66□□□□□ -1.342e-13■■□□□ 14.5
PRPF8Q6P2Q9 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.492e-13■■□□□ 14.5
PRPF8Q6P2Q9 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC5.07□□□□□ -1.62e-13■■□□□ 14.5
PRPF8Q6P2Q9 EXD3-205ENST00000475006 1132 ntTSL 317.78■□□□□ 0.442e-7■■□□□ 14.5
PRPF8Q6P2Q9 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.78■□□□□ 0.442e-7■■□□□ 14.5
PRPF8Q6P2Q9 HSP90B1-202ENST00000540297 590 ntTSL 316.81■□□□□ 0.286e-12■■□□□ 14.5
PRPF8Q6P2Q9 EXD3-211ENST00000490886 1123 ntTSL 516.18■□□□□ 0.182e-7■■□□□ 14.5
PRPF8Q6P2Q9 EXD3-202ENST00000460390 1432 ntTSL 215.97■□□□□ 0.152e-7■■□□□ 14.5
PRPF8Q6P2Q9 HSP90B1-204ENST00000548622 839 ntTSL 215.29■□□□□ 0.046e-12■■□□□ 14.5
PRPF8Q6P2Q9 HSP90B1-205ENST00000549334 581 ntTSL 414.66□□□□□ -0.066e-12■■□□□ 14.5
PRPF8Q6P2Q9 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.372e-7■■□□□ 14.5
PRPF8Q6P2Q9 WBP2-211ENST00000589642 568 ntTSL 314.15□□□□□ -0.141e-6■■□□□ 14.5
PRPF8Q6P2Q9 WBP2-202ENST00000416574 987 ntTSL 211.18□□□□□ -0.621e-6■■□□□ 14.5
PRPF8Q6P2Q9 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.057e-9■■□□□ 14.5
PRPF8Q6P2Q9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.167e-9■■□□□ 14.5
PRPF8Q6P2Q9 TM2D3-205ENST00000558677 878 ntTSL 519.97■□□□□ 0.794e-8■■□□□ 14.5
PRPF8Q6P2Q9 TM2D3-209ENST00000560013 1868 ntTSL 218.7■□□□□ 0.584e-8■■□□□ 14.5
PRPF8Q6P2Q9 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.024e-8■■□□□ 14.5
PRPF8Q6P2Q9 TM2D3-213ENST00000560910 554 ntTSL 214.4□□□□□ -0.14e-8■■□□□ 14.5
PRPF8Q6P2Q9 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.21□□□□□ -0.144e-8■■□□□ 14.5
PRPF8Q6P2Q9 TM2D3-202ENST00000347970 1329 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.844e-8■■□□□ 14.5
PRPF8Q6P2Q9 TM2D3-203ENST00000428002 1267 ntTSL 2 BASIC8.75□□□□□ -1.014e-8■■□□□ 14.5
PRPF8Q6P2Q9 TM2D3-206ENST00000559024 863 ntTSL 26.41□□□□□ -1.384e-8■■□□□ 14.5
PRPF8Q6P2Q9 GATA2-206ENST00000498200 563 ntTSL 216.35■□□□□ 0.212e-6■■□□□ 14.5
PRPF8Q6P2Q9 GRPEL1-204ENST00000514056 424 ntTSL 214.76□□□□□ -0.053e-6■■□□□ 14.5
PRPF8Q6P2Q9 GRPEL1-203ENST00000509696 884 ntTSL 210.88□□□□□ -0.673e-6■■□□□ 14.5
PRPF8Q6P2Q9 FTH1-204ENST00000529548 567 ntTSL 38.29□□□□□ -1.083e-18■■□□□ 14.5
PRPF8Q6P2Q9 ATP5D-204ENST00000589478 640 ntTSL 216.68■□□□□ 0.263e-6■■□□□ 14.5
PRPF8Q6P2Q9 ATP5D-209ENST00000614837 343 ntTSL 213.12□□□□□ -0.313e-6■■□□□ 14.5
PRPF8Q6P2Q9 PTMS-203ENST00000538057 976 ntTSL 217.75■□□□□ 0.438e-7■■□□□ 14.5
PRPF8Q6P2Q9 FBXO2-204ENST00000471501 725 ntTSL 215.04■□□□□ -02e-9■■□□□ 14.5
PRPF8Q6P2Q9 GSN-207ENST00000432226 1042 ntTSL 514.98□□□□□ -0.011e-7■■□□□ 14.5
PRPF8Q6P2Q9 GSN-212ENST00000477863 716 ntTSL 413.7□□□□□ -0.221e-7■■□□□ 14.5
PRPF8Q6P2Q9 GSN-210ENST00000477104 806 ntTSL 413.14□□□□□ -0.311e-7■■□□□ 14.5
PRPF8Q6P2Q9 PCBP4-213ENST00000489595 539 ntTSL 410.39□□□□□ -0.752e-7■■□□□ 14.5
PRPF8Q6P2Q9 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC12.65□□□□□ -0.388e-7■■□□□ 14.5
PRPF8Q6P2Q9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC12.54□□□□□ -0.48e-7■■□□□ 14.5
PRPF8Q6P2Q9 WDR6-221ENST00000610967 4259 ntTSL 1 (best) BASIC11.23□□□□□ -0.618e-7■■□□□ 14.5
PRPF8Q6P2Q9 WDR6-201ENST00000395474 4401 ntTSL 1 (best) BASIC10.99□□□□□ -0.658e-7■■□□□ 14.5
PRPF8Q6P2Q9 WDR6-208ENST00000452875 3916 ntTSL 1 (best)9.94□□□□□ -0.828e-7■■□□□ 14.5
PRPF8Q6P2Q9 WDR6-220ENST00000608424 4070 ntAPPRIS P1 TSL 1 (best) BASIC9.83□□□□□ -0.848e-7■■□□□ 14.5
PRPF8Q6P2Q9 VSNL1-202ENST00000404666 992 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.822e-6■■□□□ 14.5
PRPF8Q6P2Q9 VSNL1-201ENST00000295156 1892 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.22e-6■■□□□ 14.5
PRPF8Q6P2Q9 WDR90-218ENST00000550739 399 ntTSL 514.58□□□□□ -0.084e-7■■□□□ 14.5
PRPF8Q6P2Q9 KIAA0556-201ENST00000261588 6616 ntAPPRIS P2 TSL 1 (best) BASIC8.55□□□□□ -1.042e-6■■□□□ 14.5
PRPF8Q6P2Q9 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.9■□□□□ 0.462e-8■■□□□ 14.5
PRPF8Q6P2Q9 PREB-206ENST00000444452 2030 ntTSL 1 (best)16.97■□□□□ 0.312e-8■■□□□ 14.5
PRPF8Q6P2Q9 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.272e-8■■□□□ 14.5
PRPF8Q6P2Q9 PREB-208ENST00000468045 3057 ntTSL 213.2□□□□□ -0.32e-8■■□□□ 14.5
PRPF8Q6P2Q9 SDCCAG3-205ENST00000417512 626 ntTSL 210.93□□□□□ -0.661e-6■■□□□ 14.5
PRPF8Q6P2Q9 TOP3B-206ENST00000436282 2890 ntTSL 211.24□□□□□ -0.618e-9■■□□□ 14.5
PRPF8Q6P2Q9 TOP3B-214ENST00000457270 2956 ntTSL 59.75□□□□□ -0.858e-9■■□□□ 14.5
PRPF8Q6P2Q9 GDPD5-206ENST00000527820 3211 ntTSL 1 (best)10.28□□□□□ -0.762e-7■■□□□ 14.5
PRPF8Q6P2Q9 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC9.76□□□□□ -0.852e-7■■□□□ 14.5
PRPF8Q6P2Q9 ARMC6-211ENST00000538663 552 ntTSL 420.18■□□□□ 0.821e-6■■□□□ 14.5
PRPF8Q6P2Q9 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.822e-6■■□□□ 14.5
PRPF8Q6P2Q9 ARMC6-209ENST00000536098 563 ntTSL 517.33■□□□□ 0.361e-6■■□□□ 14.5
PRPF8Q6P2Q9 ARMC6-210ENST00000537263 1318 ntTSL 316.84■□□□□ 0.291e-6■■□□□ 14.5
PRPF8Q6P2Q9 ARMC6-204ENST00000535288 622 ntTSL 416.57■□□□□ 0.241e-6■■□□□ 14.5
PRPF8Q6P2Q9 ARMC6-217ENST00000541898 1198 ntTSL 216.57■□□□□ 0.241e-6■■□□□ 14.5
PRPF8Q6P2Q9 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC15.04■□□□□ -07e-67■■□□□ 14.5
PRPF8Q6P2Q9 RFFL-211ENST00000584541 563 ntTSL 415.04■□□□□ -02e-6■■□□□ 14.5
PRPF8Q6P2Q9 ARMC6-215ENST00000540792 951 ntTSL 212.26□□□□□ -0.451e-6■■□□□ 14.5
PRPF8Q6P2Q9 RFFL-201ENST00000315249 7293 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.552e-6■■□□□ 14.5
PRPF8Q6P2Q9 ARMC6-216ENST00000541725 560 ntTSL 511.1□□□□□ -0.631e-6■■□□□ 14.5
PRPF8Q6P2Q9 ARMC6-212ENST00000539985 1252 ntTSL 210.77□□□□□ -0.691e-6■■□□□ 14.5
PRPF8Q6P2Q9 RFFL-212ENST00000584655 4039 ntTSL 2 BASIC9.17□□□□□ -0.942e-6■■□□□ 14.5
Retrieved 100 of 73,762 protein–RNA pairs in 1206.4 ms