RNA–Protein interactions for RNA: ENST00000424697.5

ZNF3-207, Transcript of zinc finger protein 3, humanhuman

APPRIS P1 TSL 3 BASIC

Gene ZNF3, Length 2,718 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-207ENST00000424697 NISCHQ9Y2I1 1504 aa17.42■□□□□ 0.38
ZNF3-207ENST00000424697 SHROOM4Q9ULL8 1493 aa15.46■□□□□ 0.07
ZNF3-207ENST00000424697 HRCP23327 699 aa15.45■□□□□ 0.06
ZNF3-207ENST00000424697 SUPT5HO00267 1087 aaKnown RBP15.4■□□□□ 0.06
ZNF3-207ENST00000424697 PCGF6Q9BYE7 350 aa15.21■□□□□ 0.02
ZNF3-207ENST00000424697 PPARGC1BQ86YN6 1023 aaKnown RBP15.2■□□□□ 0.02
ZNF3-207ENST00000424697 MYO15BQ96JP2 1530 aa15.18■□□□□ 0.02
ZNF3-207ENST00000424697 CHIC1Q5VXU3 224 aa15.13■□□□□ 0.01
ZNF3-207ENST00000424697 LOC105371045A0A1W2PR82 267 aa14.82□□□□□ -0.04
ZNF3-207ENST00000424697 ZCCHC6Q5VYS8 1495 aaKnown RBP14.79□□□□□ -0.04
ZNF3-207ENST00000424697 DCAF1Q9Y4B6 1507 aa14.77□□□□□ -0.05
ZNF3-207ENST00000424697 TRIM26Q12899 539 aaPredicted RBP14.7□□□□□ -0.06
ZNF3-207ENST00000424697 PELP1Q8IZL8 1130 aaKnown RBP14.7□□□□□ -0.06
ZNF3-207ENST00000424697 DCAF8L2P0C7V8 631 aa14.63□□□□□ -0.07
ZNF3-207ENST00000424697 SCAF1Q9H7N4 1312 aaKnown RBP14.61□□□□□ -0.07
ZNF3-207ENST00000424697 CCDC180Q9P1Z9 1646 aa14.54□□□□□ -0.08
ZNF3-207ENST00000424697 ZEB1P37275 1124 aaPredicted RBP14.51□□□□□ -0.09
ZNF3-207ENST00000424697 FAM9AQ8IZU1 332 aaPredicted RBP14.25□□□□□ -0.13
ZNF3-207ENST00000424697 ACIN1Q9UKV3 1341 aaKnown RBP14.25□□□□□ -0.13
ZNF3-207ENST00000424697 NEUROD1Q13562 356 aa14.24□□□□□ -0.13
ZNF3-207ENST00000424697 TRIM41Q8WV44 630 aa14.22□□□□□ -0.13
ZNF3-207ENST00000424697 EHMT2Q96KQ7 1210 aa14.21□□□□□ -0.13
ZNF3-207ENST00000424697 GTF3C3Q9Y5Q9 886 aa14.14□□□□□ -0.15
ZNF3-207ENST00000424697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.13□□□□□ -0.15
ZNF3-207ENST00000424697 MYT1Q01538 1121 aa14.07□□□□□ -0.16
ZNF3-207ENST00000424697 CCER1Q8TC90 406 aaPredicted RBP14.06□□□□□ -0.16
ZNF3-207ENST00000424697 DIEXFQ68CQ4 756 aaKnown RBP14.05□□□□□ -0.16
ZNF3-207ENST00000424697 RSF1Q96T23 1441 aaPredicted RBP14.04□□□□□ -0.16
ZNF3-207ENST00000424697 CENPBP07199 599 aaPredicted RBP14.02□□□□□ -0.16
ZNF3-207ENST00000424697 ABCC9O60706 1549 aa14.01□□□□□ -0.17
ZNF3-207ENST00000424697 RB1CC1Q8TDY2 1594 aa13.93□□□□□ -0.18
ZNF3-207ENST00000424697 TTBK1Q5TCY1 1321 aaPredicted RBP13.84□□□□□ -0.19
ZNF3-207ENST00000424697 YTHDC1Q96MU7 727 aaKnown RBP13.83□□□□□ -0.2
ZNF3-207ENST00000424697 SCRIBQ14160 1630 aa13.81□□□□□ -0.2
ZNF3-207ENST00000424697 ZNF316A6NFI3 1004 aaPredicted RBP13.8□□□□□ -0.2
ZNF3-207ENST00000424697 MIER1Q8N108 512 aa13.73□□□□□ -0.21
ZNF3-207ENST00000424697 CECR2Q9BXF3 1484 aa13.69□□□□□ -0.22
ZNF3-207ENST00000424697 MROH2BQ7Z745 1585 aa13.64□□□□□ -0.23
ZNF3-207ENST00000424697 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
ZNF3-207ENST00000424697 CEP162Q5TB80 1403 aa13.59□□□□□ -0.23
ZNF3-207ENST00000424697 WIZO95785 1651 aa13.58□□□□□ -0.23
ZNF3-207ENST00000424697 HNRNPUL2Q1KMD3 747 aaKnown RBP13.54□□□□□ -0.24
ZNF3-207ENST00000424697 CCDC88BA6NC98 1476 aa13.53□□□□□ -0.24
ZNF3-207ENST00000424697 TNIKQ9UKE5 1360 aa13.51□□□□□ -0.25
ZNF3-207ENST00000424697 UBTFP17480 764 aaKnown RBP13.5□□□□□ -0.25
ZNF3-207ENST00000424697 SOGA1O94964 1423 aa13.5□□□□□ -0.25
ZNF3-207ENST00000424697 EIF4G1Q04637 1599 aaKnown RBP13.5□□□□□ -0.25
ZNF3-207ENST00000424697 ABCC8Q09428 1581 aa13.5□□□□□ -0.25
ZNF3-207ENST00000424697 SUPT16HQ9Y5B9 1047 aaKnown RBP13.47□□□□□ -0.25
ZNF3-207ENST00000424697 CSRNP3Q8WYN3 585 aa13.46□□□□□ -0.25
ZNF3-207ENST00000424697 RUSC2Q8N2Y8 1516 aa13.44□□□□□ -0.26
ZNF3-207ENST00000424697 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
ZNF3-207ENST00000424697 TSHZ2Q9NRE2 1034 aa13.41□□□□□ -0.26
ZNF3-207ENST00000424697 ANP32EQ9BTT0 268 aa13.37□□□□□ -0.27
ZNF3-207ENST00000424697 CLSPNQ9HAW4 1339 aa13.33□□□□□ -0.28
ZNF3-207ENST00000424697 GOLGA3Q08378 1498 aa13.31□□□□□ -0.28
ZNF3-207ENST00000424697 EEA1Q15075 1411 aa13.31□□□□□ -0.28
ZNF3-207ENST00000424697 NACADO15069 1562 aa13.29□□□□□ -0.28
ZNF3-207ENST00000424697 BCL11AQ9H165 835 aa13.28□□□□□ -0.28
ZNF3-207ENST00000424697 TOP2AP11388 1531 aaKnown RBP13.27□□□□□ -0.28
ZNF3-207ENST00000424697 SMARCA2P51531 1590 aa13.26□□□□□ -0.29
ZNF3-207ENST00000424697 APLP2Q06481 763 aa13.25□□□□□ -0.29
ZNF3-207ENST00000424697 RANGAP1P46060 587 aaPredicted RBP13.24□□□□□ -0.29
ZNF3-207ENST00000424697 CLIP1P30622 1438 aa13.24□□□□□ -0.29
ZNF3-207ENST00000424697 KCNH8Q96L42 1107 aa13.24□□□□□ -0.29
ZNF3-207ENST00000424697 DHX57Q6P158 1386 aaKnown RBP13.22□□□□□ -0.29
ZNF3-207ENST00000424697 BCANQ96GW7 911 aa13.21□□□□□ -0.29
ZNF3-207ENST00000424697 VPS8Q8N3P4 1428 aa13.21□□□□□ -0.3
ZNF3-207ENST00000424697 CEP164Q9UPV0 1460 aa13.18□□□□□ -0.3
ZNF3-207ENST00000424697 FKBP8Q14318 412 aa13.14□□□□□ -0.31
ZNF3-207ENST00000424697 SMARCA4P51532 1647 aa13.14□□□□□ -0.31
ZNF3-207ENST00000424697 KIF21BO75037 1637 aa13.11□□□□□ -0.31
ZNF3-207ENST00000424697 RAPGEF2Q9Y4G8 1499 aa13.1□□□□□ -0.31
ZNF3-207ENST00000424697 KANK4Q5T7N3 995 aaPredicted RBP13.1□□□□□ -0.31
ZNF3-207ENST00000424697 RBM19Q9Y4C8 960 aaKnown RBP13.1□□□□□ -0.31
ZNF3-207ENST00000424697 SYNJ1O43426 1573 aa13.06□□□□□ -0.32
ZNF3-207ENST00000424697 BAZ1BQ9UIG0 1483 aaKnown RBP13.04□□□□□ -0.32
ZNF3-207ENST00000424697 ITGAEP38570 1179 aa13.03□□□□□ -0.32
ZNF3-207ENST00000424697 DDX10Q13206 875 aaKnown RBP13.03□□□□□ -0.32
ZNF3-207ENST00000424697 MSH5O43196 834 aa13□□□□□ -0.33
ZNF3-207ENST00000424697 TRIM52Q96A61 297 aa12.97□□□□□ -0.33
ZNF3-207ENST00000424697 NEFLP07196 543 aa12.97□□□□□ -0.33
ZNF3-207ENST00000424697 RRBP1Q9P2E9 1410 aaKnown RBP12.97□□□□□ -0.33
ZNF3-207ENST00000424697 ARAP1Q96P48 1450 aa12.95□□□□□ -0.34
ZNF3-207ENST00000424697 PPP1R15AO75807 674 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-207ENST00000424697 HIRIP3Q9BW71 556 aaPredicted RBP12.94□□□□□ -0.34
ZNF3-207ENST00000424697 CUX2O14529 1486 aa12.93□□□□□ -0.34
ZNF3-207ENST00000424697 SIN3AQ96ST3 1273 aa12.93□□□□□ -0.34
ZNF3-207ENST00000424697 CCNB3Q8WWL7 1395 aa12.92□□□□□ -0.34
ZNF3-207ENST00000424697 RAB3GAP2Q9H2M9 1393 aa12.91□□□□□ -0.34
ZNF3-207ENST00000424697 MAPKBP1O60336 1514 aa12.9□□□□□ -0.34
ZNF3-207ENST00000424697 PABPN1Q86U42 306 aaKnown RBP eCLIP12.9□□□□□ -0.35
ZNF3-207ENST00000424697 WDR97A6NE52 1622 aa12.89□□□□□ -0.35
ZNF3-207ENST00000424697 CCER2I3L3R5 266 aa12.86□□□□□ -0.35
ZNF3-207ENST00000424697 UNC13AQ9UPW8 1703 aa12.85□□□□□ -0.35
ZNF3-207ENST00000424697 PRXQ9BXM0 1461 aa12.85□□□□□ -0.35
ZNF3-207ENST00000424697 ANP32CO43423 234 aa12.85□□□□□ -0.35
ZNF3-207ENST00000424697 IRX6P78412 446 aaPredicted RBP12.82□□□□□ -0.36
ZNF3-207ENST00000424697 FANCIQ9NVI1 1328 aa12.82□□□□□ -0.36
ZNF3-207ENST00000424697 ERICH3Q5RHP9 1530 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms