RNA–Protein interactions for RNA: ENST00000563642.6

CLCN7-205, Transcript of chloride voltage-gated channel 7, humanhuman

TSL 2

Gene CLCN7, Length 4,184 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN7-205ENST00000563642 NISCHQ9Y2I1 1504 aa26.04■■□□□ 1.76
CLCN7-205ENST00000563642 DCAF8L2P0C7V8 631 aa24.08■■□□□ 1.45
CLCN7-205ENST00000563642 SHROOM4Q9ULL8 1493 aa23.33■■□□□ 1.33
CLCN7-205ENST00000563642 SUPT5HO00267 1087 aaKnown RBP23.03■■□□□ 1.28
CLCN7-205ENST00000563642 PELP1Q8IZL8 1130 aaKnown RBP22.71■■□□□ 1.23
CLCN7-205ENST00000563642 HRCP23327 699 aa22.68■■□□□ 1.22
CLCN7-205ENST00000563642 PCGF6Q9BYE7 350 aa22.49■■□□□ 1.19
CLCN7-205ENST00000563642 PPARGC1BQ86YN6 1023 aaKnown RBP22.32■■□□□ 1.16
CLCN7-205ENST00000563642 MYT1Q01538 1121 aa22.02■■□□□ 1.12
CLCN7-205ENST00000563642 ABCC9O60706 1549 aa21.94■■□□□ 1.1
CLCN7-205ENST00000563642 CCDC180Q9P1Z9 1646 aa21.78■■□□□ 1.08
CLCN7-205ENST00000563642 EHMT2Q96KQ7 1210 aa21.73■■□□□ 1.07
CLCN7-205ENST00000563642 ZCCHC6Q5VYS8 1495 aaKnown RBP21.72■■□□□ 1.07
CLCN7-205ENST00000563642 ZEB1P37275 1124 aaPredicted RBP21.58■■□□□ 1.05
CLCN7-205ENST00000563642 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
CLCN7-205ENST00000563642 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
CLCN7-205ENST00000563642 FAM9AQ8IZU1 332 aaPredicted RBP21.52■■□□□ 1.04
CLCN7-205ENST00000563642 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
CLCN7-205ENST00000563642 CENPBP07199 599 aaPredicted RBP21.37■■□□□ 1.01
CLCN7-205ENST00000563642 PABPN1Q86U42 306 aaKnown RBP eCLIP21.35■■□□□ 1.015e-7■□□□□ 8.6
CLCN7-205ENST00000563642 TRIM41Q8WV44 630 aa21.31■■□□□ 1
CLCN7-205ENST00000563642 LOC105371045A0A1W2PR82 267 aa21.29■■□□□ 1
CLCN7-205ENST00000563642 MYO15BQ96JP2 1530 aa21.25■□□□□ 0.99
CLCN7-205ENST00000563642 SCRIBQ14160 1630 aa21.2■□□□□ 0.98
CLCN7-205ENST00000563642 GTF3C3Q9Y5Q9 886 aa21.16■□□□□ 0.98
CLCN7-205ENST00000563642 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
CLCN7-205ENST00000563642 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
CLCN7-205ENST00000563642 NEUROD1Q13562 356 aa21■□□□□ 0.95
CLCN7-205ENST00000563642 CCER1Q8TC90 406 aaPredicted RBP20.95■□□□□ 0.94
CLCN7-205ENST00000563642 YTHDC1Q96MU7 727 aaKnown RBP20.94■□□□□ 0.94
CLCN7-205ENST00000563642 TTBK1Q5TCY1 1321 aaPredicted RBP20.85■□□□□ 0.93
CLCN7-205ENST00000563642 RANGAP1P46060 587 aaPredicted RBP20.83■□□□□ 0.92
CLCN7-205ENST00000563642 DIEXFQ68CQ4 756 aaKnown RBP20.82■□□□□ 0.92
CLCN7-205ENST00000563642 NACADO15069 1562 aa20.74■□□□□ 0.91
CLCN7-205ENST00000563642 RB1CC1Q8TDY2 1594 aa20.71■□□□□ 0.91
CLCN7-205ENST00000563642 UBTFP17480 764 aaKnown RBP20.7■□□□□ 0.9
CLCN7-205ENST00000563642 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.7■□□□□ 0.9
CLCN7-205ENST00000563642 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
CLCN7-205ENST00000563642 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
CLCN7-205ENST00000563642 APLP2Q06481 763 aa20.51■□□□□ 0.87
CLCN7-205ENST00000563642 BCL11AQ9H165 835 aa20.31■□□□□ 0.84
CLCN7-205ENST00000563642 MROH2BQ7Z745 1585 aa20.29■□□□□ 0.84
CLCN7-205ENST00000563642 ATP1B4Q9UN42 357 aaPredicted RBP20.27■□□□□ 0.84
CLCN7-205ENST00000563642 ZNF316A6NFI3 1004 aaPredicted RBP20.25■□□□□ 0.83
CLCN7-205ENST00000563642 BAZ1AQ9NRL2 1556 aaPredicted RBP20.18■□□□□ 0.82
CLCN7-205ENST00000563642 ANP32EQ9BTT0 268 aa20.16■□□□□ 0.82
CLCN7-205ENST00000563642 CSRNP3Q8WYN3 585 aa20.1■□□□□ 0.81
CLCN7-205ENST00000563642 ERICH6Q7L0X2 663 aa20.09■□□□□ 0.81
CLCN7-205ENST00000563642 MIER1Q8N108 512 aa20.07■□□□□ 0.8
CLCN7-205ENST00000563642 WIZO95785 1651 aa20.05■□□□□ 0.8
CLCN7-205ENST00000563642 BAZ1BQ9UIG0 1483 aaKnown RBP19.98■□□□□ 0.79
CLCN7-205ENST00000563642 BCANQ96GW7 911 aa19.97■□□□□ 0.79
CLCN7-205ENST00000563642 NEFLP07196 543 aa19.91■□□□□ 0.78
CLCN7-205ENST00000563642 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
CLCN7-205ENST00000563642 HNRNPUL2Q1KMD3 747 aaKnown RBP19.91■□□□□ 0.78
CLCN7-205ENST00000563642 CLSPNQ9HAW4 1339 aa19.89■□□□□ 0.77
CLCN7-205ENST00000563642 ITGAEP38570 1179 aa19.86■□□□□ 0.77
CLCN7-205ENST00000563642 SUPT16HQ9Y5B9 1047 aaKnown RBP19.85■□□□□ 0.77
CLCN7-205ENST00000563642 WRNQ14191 1432 aaPredicted RBP eCLIP19.8■□□□□ 0.762e-6■■■■□ 22.3
CLCN7-205ENST00000563642 SMARCA4P51532 1647 aa19.79■□□□□ 0.76
CLCN7-205ENST00000563642 ABCC8Q09428 1581 aa19.78■□□□□ 0.76
CLCN7-205ENST00000563642 TSHZ2Q9NRE2 1034 aa19.78■□□□□ 0.76
CLCN7-205ENST00000563642 P3H3Q8IVL6 736 aa19.74■□□□□ 0.75
CLCN7-205ENST00000563642 TOP2AP11388 1531 aaKnown RBP19.72■□□□□ 0.75
CLCN7-205ENST00000563642 ATAD2BQ9ULI0 1458 aa19.7■□□□□ 0.74
CLCN7-205ENST00000563642 SOGA1O94964 1423 aa19.7■□□□□ 0.74
CLCN7-205ENST00000563642 FKBP8Q14318 412 aa19.64■□□□□ 0.73
CLCN7-205ENST00000563642 SMARCA2P51531 1590 aa19.63■□□□□ 0.73
CLCN7-205ENST00000563642 FBLN2P98095 1184 aa19.59■□□□□ 0.73
CLCN7-205ENST00000563642 CEP162Q5TB80 1403 aa19.52■□□□□ 0.71
CLCN7-205ENST00000563642 PRKCSHP14314 528 aaPredicted RBP19.51■□□□□ 0.71
CLCN7-205ENST00000563642 BICRAQ9NZM4 1560 aa19.5■□□□□ 0.71
CLCN7-205ENST00000563642 ARID3CA6NKF2 412 aa19.5■□□□□ 0.71
CLCN7-205ENST00000563642 EEA1Q15075 1411 aa19.49■□□□□ 0.71
CLCN7-205ENST00000563642 FAM50AQ14320 339 aaKnown RBP19.49■□□□□ 0.71
CLCN7-205ENST00000563642 CLIP1P30622 1438 aa19.46■□□□□ 0.71
CLCN7-205ENST00000563642 GOLGA3Q08378 1498 aa19.45■□□□□ 0.7
CLCN7-205ENST00000563642 RBM19Q9Y4C8 960 aaKnown RBP19.44■□□□□ 0.7
CLCN7-205ENST00000563642 RUSC2Q8N2Y8 1516 aa19.43■□□□□ 0.7
CLCN7-205ENST00000563642 TNIKQ9UKE5 1360 aa19.41■□□□□ 0.7
CLCN7-205ENST00000563642 UNC13AQ9UPW8 1703 aa19.39■□□□□ 0.69
CLCN7-205ENST00000563642 CDK11AQ9UQ88 783 aaPredicted RBP19.39■□□□□ 0.69
CLCN7-205ENST00000563642 KIF27Q86VH2 1401 aa19.38■□□□□ 0.69
CLCN7-205ENST00000563642 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
CLCN7-205ENST00000563642 CEP164Q9UPV0 1460 aa19.35■□□□□ 0.69
CLCN7-205ENST00000563642 CADPSQ9ULU8 1353 aa19.32■□□□□ 0.68
CLCN7-205ENST00000563642 MYT1LQ9UL68 1186 aa19.31■□□□□ 0.68
CLCN7-205ENST00000563642 CUX2O14529 1486 aa19.3■□□□□ 0.68
CLCN7-205ENST00000563642 RTL5Q5HYW3 569 aaPredicted RBP19.29■□□□□ 0.68
CLCN7-205ENST00000563642 NCAPD3P42695 1498 aa19.28■□□□□ 0.68
CLCN7-205ENST00000563642 TRIM52Q96A61 297 aa19.24■□□□□ 0.67
CLCN7-205ENST00000563642 NBR1Q14596 966 aa19.22■□□□□ 0.67
CLCN7-205ENST00000563642 DEKP35659 375 aaKnown RBP19.21■□□□□ 0.67
CLCN7-205ENST00000563642 CARMIL1Q5VZK9 1371 aa19.19■□□□□ 0.66
CLCN7-205ENST00000563642 TDRD9Q8NDG6 1382 aaKnown RBP19.17■□□□□ 0.66
CLCN7-205ENST00000563642 DDX10Q13206 875 aaKnown RBP19.16■□□□□ 0.66
CLCN7-205ENST00000563642 RAPGEF2Q9Y4G8 1499 aa19.15■□□□□ 0.66
CLCN7-205ENST00000563642 DNAJC5BQ9UF47 199 aa19.15■□□□□ 0.66
CLCN7-205ENST00000563642 ANP32CO43423 234 aa19.13■□□□□ 0.65
CLCN7-205ENST00000563642 CHMP7Q8WUX9 453 aaPredicted RBP19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms