RNA–Protein interactions for RNA: ENST00000347970.7

TM2D3-202, Transcript of TM2 domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TM2D3, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-202ENST00000347970 AEBP2Q6ZN18 517 aaPredicted RBP29.23■■■□□ 2.27
TM2D3-202ENST00000347970 NISCHQ9Y2I1 1504 aa28.05■■■□□ 2.08
TM2D3-202ENST00000347970 CHIC1Q5VXU3 224 aa27.58■■■□□ 2.01
TM2D3-202ENST00000347970 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
TM2D3-202ENST00000347970 CCDC180Q9P1Z9 1646 aa25.04■■□□□ 1.6
TM2D3-202ENST00000347970 PHF23Q9BUL5 403 aaPredicted RBP24.77■■□□□ 1.56
TM2D3-202ENST00000347970 ABCC9O60706 1549 aa24.67■■□□□ 1.54
TM2D3-202ENST00000347970 POTEDQ86YR6 584 aa23.82■■□□□ 1.4
TM2D3-202ENST00000347970 RB1CC1Q8TDY2 1594 aa23.61■■□□□ 1.37
TM2D3-202ENST00000347970 FOXD1Q16676 465 aa23.6■■□□□ 1.37
TM2D3-202ENST00000347970 NACADO15069 1562 aa23.53■■□□□ 1.36
TM2D3-202ENST00000347970 DCAF8L2P0C7V8 631 aa23.44■■□□□ 1.34
TM2D3-202ENST00000347970 ZCCHC6Q5VYS8 1495 aaKnown RBP23.34■■□□□ 1.33
TM2D3-202ENST00000347970 MYO15BQ96JP2 1530 aa23.31■■□□□ 1.32
TM2D3-202ENST00000347970 UNC13AQ9UPW8 1703 aa23.21■■□□□ 1.31
TM2D3-202ENST00000347970 DCAF1Q9Y4B6 1507 aa23.16■■□□□ 1.3
TM2D3-202ENST00000347970 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
TM2D3-202ENST00000347970 BICRAQ9NZM4 1560 aa22.98■■□□□ 1.27
TM2D3-202ENST00000347970 SCRIBQ14160 1630 aa22.86■■□□□ 1.25
TM2D3-202ENST00000347970 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
TM2D3-202ENST00000347970 MSH5O43196 834 aa22.7■■□□□ 1.22
TM2D3-202ENST00000347970 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
TM2D3-202ENST00000347970 EIF4G1Q04637 1599 aaKnown RBP22.35■■□□□ 1.17
TM2D3-202ENST00000347970 CC2D2AQ9P2K1 1620 aa22.32■■□□□ 1.16
TM2D3-202ENST00000347970 CECR2Q9BXF3 1484 aa22.16■■□□□ 1.14
TM2D3-202ENST00000347970 PIAS4Q8N2W9 510 aaPredicted RBP21.88■■□□□ 1.09
TM2D3-202ENST00000347970 SMARCA4P51532 1647 aa21.83■■□□□ 1.09
TM2D3-202ENST00000347970 BAZ1AQ9NRL2 1556 aaPredicted RBP21.73■■□□□ 1.07
TM2D3-202ENST00000347970 ATAD2BQ9ULI0 1458 aa21.72■■□□□ 1.07
TM2D3-202ENST00000347970 NCAPD3P42695 1498 aa21.7■■□□□ 1.06
TM2D3-202ENST00000347970 SMARCA2P51531 1590 aa21.66■■□□□ 1.06
TM2D3-202ENST00000347970 MROH2BQ7Z745 1585 aa21.64■■□□□ 1.05
TM2D3-202ENST00000347970 HMGXB3Q12766 1538 aa21.61■■□□□ 1.05
TM2D3-202ENST00000347970 PEG3Q9GZU2 1588 aa21.59■■□□□ 1.05
TM2D3-202ENST00000347970 BAZ1BQ9UIG0 1483 aaKnown RBP21.52■■□□□ 1.04
TM2D3-202ENST00000347970 WIZO95785 1651 aa21.44■■□□□ 1.02
TM2D3-202ENST00000347970 NESP48681 1621 aa21.32■■□□□ 1
TM2D3-202ENST00000347970 RSF1Q96T23 1441 aaPredicted RBP21.29■■□□□ 1
TM2D3-202ENST00000347970 ERCC6Q03468 1493 aa21.23■□□□□ 0.99
TM2D3-202ENST00000347970 LAMC3Q9Y6N6 1575 aa21.18■□□□□ 0.98
TM2D3-202ENST00000347970 PPP6R1Q9UPN7 881 aa21.16■□□□□ 0.98
TM2D3-202ENST00000347970 TOP2AP11388 1531 aaKnown RBP21.14■□□□□ 0.98
TM2D3-202ENST00000347970 KIF21AQ7Z4S6 1674 aa21.1■□□□□ 0.97
TM2D3-202ENST00000347970 PLPPR3Q6T4P5 718 aa21.08■□□□□ 0.97
TM2D3-202ENST00000347970 ADRA2BP18089 450 aa21.07■□□□□ 0.96
TM2D3-202ENST00000347970 CUX2O14529 1486 aa21.06■□□□□ 0.96
TM2D3-202ENST00000347970 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
TM2D3-202ENST00000347970 THOC2Q8NI27 1593 aaKnown RBP21.05■□□□□ 0.96
TM2D3-202ENST00000347970 PDS5BQ9NTI5 1447 aa21■□□□□ 0.95
TM2D3-202ENST00000347970 CFTRP13569 1480 aa20.92■□□□□ 0.94
TM2D3-202ENST00000347970 CCDC88BA6NC98 1476 aa20.89■□□□□ 0.94
TM2D3-202ENST00000347970 FANCD2Q9BXW9 1451 aa20.84■□□□□ 0.93
TM2D3-202ENST00000347970 MRC2Q9UBG0 1479 aa20.84■□□□□ 0.93
TM2D3-202ENST00000347970 PRDM2Q13029 1718 aa20.84■□□□□ 0.93
TM2D3-202ENST00000347970 CEP164Q9UPV0 1460 aa20.84■□□□□ 0.93
TM2D3-202ENST00000347970 WDR62O43379 1518 aa20.8■□□□□ 0.92
TM2D3-202ENST00000347970 URB2Q14146 1524 aaKnown RBP20.68■□□□□ 0.9
TM2D3-202ENST00000347970 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
TM2D3-202ENST00000347970 DNAJC5Q9H3Z4 198 aa20.6■□□□□ 0.89
TM2D3-202ENST00000347970 TOPBP1Q92547 1522 aa20.52■□□□□ 0.87
TM2D3-202ENST00000347970 DNMBPQ6XZF7 1577 aa20.47■□□□□ 0.87
TM2D3-202ENST00000347970 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
TM2D3-202ENST00000347970 IFT140Q96RY7 1462 aa20.39■□□□□ 0.85
TM2D3-202ENST00000347970 ZNF608Q9ULD9 1512 aaPredicted RBP20.38■□□□□ 0.85
TM2D3-202ENST00000347970 TARBP1Q13395 1621 aaKnown RBP20.33■□□□□ 0.85
TM2D3-202ENST00000347970 POLA1P09884 1462 aaPredicted RBP20.33■□□□□ 0.84
TM2D3-202ENST00000347970 CUX1P39880 1505 aa20.32■□□□□ 0.84
TM2D3-202ENST00000347970 EIF4G3O43432 1585 aaKnown RBP20.3■□□□□ 0.84
TM2D3-202ENST00000347970 RAD54L2Q9Y4B4 1467 aa20.26■□□□□ 0.83
TM2D3-202ENST00000347970 FGD5Q6ZNL6 1462 aa20.25■□□□□ 0.83
TM2D3-202ENST00000347970 AQRO60306 1485 aaKnown RBP eCLIP20.21■□□□□ 0.832e-6■■■■■ 26.9
TM2D3-202ENST00000347970 SOGA1O94964 1423 aa20.2■□□□□ 0.82
TM2D3-202ENST00000347970 WDR97A6NE52 1622 aa20.16■□□□□ 0.82
TM2D3-202ENST00000347970 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
TM2D3-202ENST00000347970 CHD1O14646 1710 aa20.11■□□□□ 0.81
TM2D3-202ENST00000347970 SYNJ1O43426 1573 aa20.11■□□□□ 0.81
TM2D3-202ENST00000347970 OSCARQ8IYS5 282 aa20.1■□□□□ 0.81
TM2D3-202ENST00000347970 BIVM-ERCC5R4GMW8 1640 aa20.1■□□□□ 0.81
TM2D3-202ENST00000347970 CACNB1Q02641 598 aaPredicted RBP20.08■□□□□ 0.81
TM2D3-202ENST00000347970 TOP2BQ02880 1626 aa20.08■□□□□ 0.8
TM2D3-202ENST00000347970 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
TM2D3-202ENST00000347970 PBRM1Q86U86 1689 aa20.03■□□□□ 0.8
TM2D3-202ENST00000347970 SNAPC4Q5SXM2 1469 aa20.03■□□□□ 0.8
TM2D3-202ENST00000347970 ABCA10Q8WWZ4 1543 aa20.02■□□□□ 0.8
TM2D3-202ENST00000347970 ABCA5Q8WWZ7 1642 aa20.02■□□□□ 0.79
TM2D3-202ENST00000347970 GRIN2BQ13224 1484 aa19.99■□□□□ 0.79
TM2D3-202ENST00000347970 GAPVD1Q14C86 1478 aa19.98■□□□□ 0.79
TM2D3-202ENST00000347970 MAGI1Q96QZ7 1491 aaPredicted RBP19.95■□□□□ 0.78
TM2D3-202ENST00000347970 FBLN2P98095 1184 aa19.95■□□□□ 0.78
TM2D3-202ENST00000347970 RIMBP3CA6NJZ7 1639 aa19.93■□□□□ 0.78
TM2D3-202ENST00000347970 RIMBP3BA6NNM3 1639 aa19.93■□□□□ 0.78
TM2D3-202ENST00000347970 RIMBP3Q9UFD9 1639 aa19.93■□□□□ 0.78
TM2D3-202ENST00000347970 SYNJ2O15056 1496 aa19.89■□□□□ 0.77
TM2D3-202ENST00000347970 TRIM41Q8WV44 630 aa19.88■□□□□ 0.77
TM2D3-202ENST00000347970 DMRT2Q9Y5R5 561 aa19.88■□□□□ 0.77
TM2D3-202ENST00000347970 ARHGEF11O15085 1522 aa19.88■□□□□ 0.77
TM2D3-202ENST00000347970 CLASP1Q7Z460 1538 aa19.85■□□□□ 0.77
TM2D3-202ENST00000347970 CHMP7Q8WUX9 453 aaPredicted RBP19.84■□□□□ 0.77
TM2D3-202ENST00000347970 ADAMTS12P58397 1594 aa19.84■□□□□ 0.77
TM2D3-202ENST00000347970 ERICH3Q5RHP9 1530 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms