RNA–Protein interactions for RNA: ENST00000396020.7

RPS29-202, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best) BASIC

Gene RPS29, Length 7,062 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-202ENST00000396020 DCAF8L2P0C7V8 631 aa12.53□□□□□ -0.4
RPS29-202ENST00000396020 NISCHQ9Y2I1 1504 aa12.22□□□□□ -0.45
RPS29-202ENST00000396020 EHMT2Q96KQ7 1210 aa11.95□□□□□ -0.5
RPS29-202ENST00000396020 SUPT5HO00267 1087 aaKnown RBP11.81□□□□□ -0.52
RPS29-202ENST00000396020 SHROOM4Q9ULL8 1493 aa11.73□□□□□ -0.53
RPS29-202ENST00000396020 PELP1Q8IZL8 1130 aaKnown RBP11.56□□□□□ -0.56
RPS29-202ENST00000396020 TTBK1Q5TCY1 1321 aaPredicted RBP11.53□□□□□ -0.56
RPS29-202ENST00000396020 ERICH6Q7L0X2 663 aa11.37□□□□□ -0.59
RPS29-202ENST00000396020 APLP2Q06481 763 aa11.33□□□□□ -0.6
RPS29-202ENST00000396020 RANGAP1P46060 587 aaPredicted RBP11.31□□□□□ -0.6
RPS29-202ENST00000396020 FAM9AQ8IZU1 332 aaPredicted RBP11.27□□□□□ -0.61
RPS29-202ENST00000396020 ATP1B4Q9UN42 357 aaPredicted RBP11.19□□□□□ -0.62
RPS29-202ENST00000396020 PCGF6Q9BYE7 350 aa11.19□□□□□ -0.62
RPS29-202ENST00000396020 YTHDC1Q96MU7 727 aaKnown RBP11.1□□□□□ -0.63
RPS29-202ENST00000396020 MYT1Q01538 1121 aa11.07□□□□□ -0.64
RPS29-202ENST00000396020 CCER1Q8TC90 406 aaPredicted RBP11.07□□□□□ -0.64
RPS29-202ENST00000396020 CENPBP07199 599 aaPredicted RBP11.01□□□□□ -0.65
RPS29-202ENST00000396020 PPARGC1BQ86YN6 1023 aaKnown RBP10.95□□□□□ -0.66
RPS29-202ENST00000396020 NEFLP07196 543 aa10.89□□□□□ -0.67
RPS29-202ENST00000396020 TRIM41Q8WV44 630 aa10.85□□□□□ -0.67
RPS29-202ENST00000396020 UBTFP17480 764 aaKnown RBP10.84□□□□□ -0.67
RPS29-202ENST00000396020 ZEB1P37275 1124 aaPredicted RBP10.83□□□□□ -0.68
RPS29-202ENST00000396020 POLR3GLQ9BT43 218 aa10.83□□□□□ -0.68
RPS29-202ENST00000396020 CNGB1Q14028 1251 aaPredicted RBP10.8□□□□□ -0.68
RPS29-202ENST00000396020 CHIC1Q5VXU3 224 aa10.8□□□□□ -0.68
RPS29-202ENST00000396020 MYT1LQ9UL68 1186 aa10.77□□□□□ -0.69
RPS29-202ENST00000396020 DAXXQ9UER7 740 aaPredicted RBP10.76□□□□□ -0.69
RPS29-202ENST00000396020 ITGAEP38570 1179 aa10.72□□□□□ -0.69
RPS29-202ENST00000396020 SLC4A1APQ9BWU0 796 aaKnown RBP10.69□□□□□ -0.7
RPS29-202ENST00000396020 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
RPS29-202ENST00000396020 HNRNPUL2Q1KMD3 747 aaKnown RBP10.62□□□□□ -0.71
RPS29-202ENST00000396020 ABCC9O60706 1549 aa10.59□□□□□ -0.71
RPS29-202ENST00000396020 ZNF316A6NFI3 1004 aaPredicted RBP10.56□□□□□ -0.72
RPS29-202ENST00000396020 TRIM26Q12899 539 aaPredicted RBP10.51□□□□□ -0.73
RPS29-202ENST00000396020 CLSPNQ9HAW4 1339 aa10.48□□□□□ -0.73
RPS29-202ENST00000396020 LOC105371045A0A1W2PR82 267 aa10.44□□□□□ -0.74
RPS29-202ENST00000396020 HRCP23327 699 aa10.44□□□□□ -0.74
RPS29-202ENST00000396020 BCL11AQ9H165 835 aa10.44□□□□□ -0.74
RPS29-202ENST00000396020 PABPN1Q86U42 306 aaKnown RBP eCLIP10.43□□□□□ -0.74
RPS29-202ENST00000396020 RTL5Q5HYW3 569 aaPredicted RBP10.4□□□□□ -0.74
RPS29-202ENST00000396020 BCANQ96GW7 911 aa10.4□□□□□ -0.74
RPS29-202ENST00000396020 SLC24A1O60721 1099 aa10.38□□□□□ -0.75
RPS29-202ENST00000396020 FAM50AQ14320 339 aaKnown RBP10.37□□□□□ -0.75
RPS29-202ENST00000396020 SCRIBQ14160 1630 aa10.36□□□□□ -0.75
RPS29-202ENST00000396020 NEUROD1Q13562 356 aa10.36□□□□□ -0.75
RPS29-202ENST00000396020 CCDC180Q9P1Z9 1646 aa10.36□□□□□ -0.75
RPS29-202ENST00000396020 DIEXFQ68CQ4 756 aaKnown RBP10.32□□□□□ -0.76
RPS29-202ENST00000396020 TRIM52Q96A61 297 aa10.31□□□□□ -0.76
RPS29-202ENST00000396020 ZNF326Q5BKZ1 582 aaKnown RBP10.26□□□□□ -0.77
RPS29-202ENST00000396020 CANXP27824 592 aaKnown RBP10.22□□□□□ -0.77
RPS29-202ENST00000396020 ZBTB47Q9UFB7 747 aaPredicted RBP10.22□□□□□ -0.77
RPS29-202ENST00000396020 CDK11AQ9UQ88 783 aaPredicted RBP10.2□□□□□ -0.78
RPS29-202ENST00000396020 GTF3C3Q9Y5Q9 886 aa10.19□□□□□ -0.78
RPS29-202ENST00000396020 NPM2Q86SE8 214 aaKnown RBP10.17□□□□□ -0.78
RPS29-202ENST00000396020 ANP32CO43423 234 aa10.15□□□□□ -0.78
RPS29-202ENST00000396020 FBLN2P98095 1184 aa10.14□□□□□ -0.79
RPS29-202ENST00000396020 PLPPR3Q6T4P5 718 aa10.13□□□□□ -0.79
RPS29-202ENST00000396020 ZCCHC6Q5VYS8 1495 aaKnown RBP10.12□□□□□ -0.79
RPS29-202ENST00000396020 ARID3CA6NKF2 412 aa10.11□□□□□ -0.79
RPS29-202ENST00000396020 RB1CC1Q8TDY2 1594 aa10.07□□□□□ -0.8
RPS29-202ENST00000396020 P3H3Q8IVL6 736 aa10.03□□□□□ -0.8
RPS29-202ENST00000396020 ANP32AP39687 249 aaKnown RBP10.03□□□□□ -0.8
RPS29-202ENST00000396020 ARXQ96QS3 562 aa10.01□□□□□ -0.81
RPS29-202ENST00000396020 EIF5BO60841 1220 aaKnown RBP10.01□□□□□ -0.81
RPS29-202ENST00000396020 NEFMP07197 916 aa10□□□□□ -0.81
RPS29-202ENST00000396020 NBR1Q14596 966 aa9.98□□□□□ -0.81
RPS29-202ENST00000396020 ZNF777Q9ULD5 760 aaPredicted RBP9.97□□□□□ -0.81
RPS29-202ENST00000396020 SALL2Q9Y467 1007 aaPredicted RBP9.96□□□□□ -0.81
RPS29-202ENST00000396020 HSP90AA1P07900 732 aaKnown RBP9.96□□□□□ -0.82
RPS29-202ENST00000396020 FKBP8Q14318 412 aa9.93□□□□□ -0.82
RPS29-202ENST00000396020 ANP32BQ92688 251 aaKnown RBP9.93□□□□□ -0.82
RPS29-202ENST00000396020 SENP3Q9H4L4 574 aaPredicted RBP9.93□□□□□ -0.82
RPS29-202ENST00000396020 CHGAP10645 457 aaKnown RBP9.91□□□□□ -0.82
RPS29-202ENST00000396020 NACADO15069 1562 aa9.91□□□□□ -0.82
RPS29-202ENST00000396020 SCAF1Q9H7N4 1312 aaKnown RBP9.91□□□□□ -0.82
RPS29-202ENST00000396020 FAM9BQ8IZU0 186 aa9.89□□□□□ -0.83
RPS29-202ENST00000396020 PLEKHG5O94827 1062 aa9.89□□□□□ -0.83
RPS29-202ENST00000396020 STAG3Q9UJ98 1225 aa9.88□□□□□ -0.83
RPS29-202ENST00000396020 CSRNP3Q8WYN3 585 aa9.88□□□□□ -0.83
RPS29-202ENST00000396020 ZBTB7CA1YPR0 619 aa9.87□□□□□ -0.83
RPS29-202ENST00000396020 ACIN1Q9UKV3 1341 aaKnown RBP9.86□□□□□ -0.83
RPS29-202ENST00000396020 A0A0G2JS52 829 aa9.85□□□□□ -0.83
RPS29-202ENST00000396020 IRX6P78412 446 aaPredicted RBP9.83□□□□□ -0.84
RPS29-202ENST00000396020 TPRNQ4KMQ1 711 aa9.83□□□□□ -0.84
RPS29-202ENST00000396020 ESF1Q9H501 851 aaKnown RBP9.82□□□□□ -0.84
RPS29-202ENST00000396020 UPF2Q9HAU5 1272 aaKnown RBP9.82□□□□□ -0.84
RPS29-202ENST00000396020 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.82□□□□□ -0.84
RPS29-202ENST00000396020 TULP1O00294 542 aaPredicted RBP9.81□□□□□ -0.84
RPS29-202ENST00000396020 HNRNPUQ00839 825 aaKnown RBP eCLIP9.8□□□□□ -0.84
RPS29-202ENST00000396020 BAZ1BQ9UIG0 1483 aaKnown RBP9.77□□□□□ -0.84
RPS29-202ENST00000396020 DDX10Q13206 875 aaKnown RBP9.77□□□□□ -0.85
RPS29-202ENST00000396020 TONSLQ96HA7 1378 aa9.76□□□□□ -0.85
RPS29-202ENST00000396020 NPM1P06748 294 aaKnown RBP eCLIP9.76□□□□□ -0.85
RPS29-202ENST00000396020 KDM2AQ9Y2K7 1162 aa9.76□□□□□ -0.85
RPS29-202ENST00000396020 GLIPR1L2Q4G1C9 344 aa9.75□□□□□ -0.85
RPS29-202ENST00000396020 SENP3-EIF4A1A0A087X0R7 540 aa9.74□□□□□ -0.85
RPS29-202ENST00000396020 WDR43Q15061 677 aaKnown RBP eCLIP9.74□□□□□ -0.85
RPS29-202ENST00000396020 HIRIP3Q9BW71 556 aaPredicted RBP9.74□□□□□ -0.85
RPS29-202ENST00000396020 CHIC2Q9UKJ5 165 aa9.74□□□□□ -0.85
RPS29-202ENST00000396020 CCDC136Q96JN2 1154 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms