RNA–Protein interactions for RNA: ENST00000444452.5

PREB-206, Transcript of prolactin regulatory element binding, humanhuman

TSL 1 (best)

Gene PREB, Length 2,030 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PREB-206ENST00000444452 NISCHQ9Y2I1 1504 aa48.06■■■■■ 5.28
PREB-206ENST00000444452 CCDC180Q9P1Z9 1646 aa41.33■■■■■ 4.21
PREB-206ENST00000444452 ZCCHC6Q5VYS8 1495 aaKnown RBP40.6■■■■■ 4.09
PREB-206ENST00000444452 SHROOM4Q9ULL8 1493 aa40.05■■■■■ 4
PREB-206ENST00000444452 DCAF1Q9Y4B6 1507 aa39.7■■■■□ 3.95
PREB-206ENST00000444452 DCAF8L2P0C7V8 631 aa39.4■■■■□ 3.9
PREB-206ENST00000444452 SUPT5HO00267 1087 aaKnown RBP39.04■■■■□ 3.84
PREB-206ENST00000444452 MYO15BQ96JP2 1530 aa38.82■■■■□ 3.8
PREB-206ENST00000444452 NACADO15069 1562 aa38.27■■■■□ 3.72
PREB-206ENST00000444452 SCRIBQ14160 1630 aa38.26■■■■□ 3.71
PREB-206ENST00000444452 ABCC9O60706 1549 aa38.25■■■■□ 3.71
PREB-206ENST00000444452 CHIC1Q5VXU3 224 aa37.93■■■■□ 3.66
PREB-206ENST00000444452 RSF1Q96T23 1441 aaPredicted RBP37.73■■■■□ 3.63
PREB-206ENST00000444452 RB1CC1Q8TDY2 1594 aa37.69■■■■□ 3.62
PREB-206ENST00000444452 CECR2Q9BXF3 1484 aa37.31■■■■□ 3.56
PREB-206ENST00000444452 MROH2BQ7Z745 1585 aa37.21■■■■□ 3.55
PREB-206ENST00000444452 BAZ1AQ9NRL2 1556 aaPredicted RBP37.01■■■■□ 3.52
PREB-206ENST00000444452 UNC13AQ9UPW8 1703 aa37■■■■□ 3.51
PREB-206ENST00000444452 WIZO95785 1651 aa36.95■■■■□ 3.51
PREB-206ENST00000444452 SMARCA4P51532 1647 aa36.72■■■■□ 3.47
PREB-206ENST00000444452 TRIM41Q8WV44 630 aa36.6■■■■□ 3.45
PREB-206ENST00000444452 BICRAQ9NZM4 1560 aa36.6■■■■□ 3.45
PREB-206ENST00000444452 TOP2AP11388 1531 aaKnown RBP36.56■■■■□ 3.44
PREB-206ENST00000444452 LOC105371045A0A1W2PR82 267 aa36.54■■■■□ 3.44
PREB-206ENST00000444452 EIF4G1Q04637 1599 aaKnown RBP36.43■■■■□ 3.42
PREB-206ENST00000444452 PABPN1Q86U42 306 aaKnown RBP eCLIP36.31■■■■□ 3.4
PREB-206ENST00000444452 SMARCA2P51531 1590 aa36.28■■■■□ 3.4
PREB-206ENST00000444452 CCDC88BA6NC98 1476 aa36.24■■■■□ 3.39
PREB-206ENST00000444452 PEG3Q9GZU2 1588 aa36.21■■■■□ 3.39
PREB-206ENST00000444452 PCGF6Q9BYE7 350 aa36.01■■■■□ 3.35
PREB-206ENST00000444452 FAM9AQ8IZU1 332 aaPredicted RBP36■■■■□ 3.35
PREB-206ENST00000444452 ATAD2BQ9ULI0 1458 aa35.86■■■■□ 3.33
PREB-206ENST00000444452 ABCC8Q09428 1581 aa35.85■■■■□ 3.33
PREB-206ENST00000444452 HRCP23327 699 aa35.84■■■■□ 3.33
PREB-206ENST00000444452 BAZ1BQ9UIG0 1483 aaKnown RBP35.71■■■■□ 3.31
PREB-206ENST00000444452 TRIM26Q12899 539 aaPredicted RBP35.69■■■■□ 3.3
PREB-206ENST00000444452 EEA1Q15075 1411 aa35.49■■■■□ 3.27
PREB-206ENST00000444452 EHMT2Q96KQ7 1210 aa35.49■■■■□ 3.27
PREB-206ENST00000444452 WRNQ14191 1432 aaPredicted RBP eCLIP35.47■■■■□ 3.27
PREB-206ENST00000444452 SOGA1O94964 1423 aa35.41■■■■□ 3.26
PREB-206ENST00000444452 HMGXB3Q12766 1538 aa35.38■■■■□ 3.25
PREB-206ENST00000444452 NCAPD3P42695 1498 aa35.35■■■■□ 3.25
PREB-206ENST00000444452 SYNJ1O43426 1573 aa35.29■■■■□ 3.24
PREB-206ENST00000444452 CSRNP3Q8WYN3 585 aa35.22■■■■□ 3.23
PREB-206ENST00000444452 RUSC2Q8N2Y8 1516 aa35.22■■■■□ 3.23
PREB-206ENST00000444452 TNIKQ9UKE5 1360 aa35.18■■■■□ 3.22
PREB-206ENST00000444452 CEP162Q5TB80 1403 aa35.09■■■■□ 3.21
PREB-206ENST00000444452 GOLGA3Q08378 1498 aa35.08■■■■□ 3.21
PREB-206ENST00000444452 TOP2BQ02880 1626 aa35.04■■■■□ 3.2
PREB-206ENST00000444452 KIF21BO75037 1637 aa34.98■■■■□ 3.19
PREB-206ENST00000444452 BIVM-ERCC5R4GMW8 1640 aa34.97■■■■□ 3.19
PREB-206ENST00000444452 CEP164Q9UPV0 1460 aa34.96■■■■□ 3.19
PREB-206ENST00000444452 CFTRP13569 1480 aa34.88■■■■□ 3.17
PREB-206ENST00000444452 UBTFP17480 764 aaKnown RBP34.88■■■■□ 3.17
PREB-206ENST00000444452 PPARGC1BQ86YN6 1023 aaKnown RBP34.87■■■■□ 3.17
PREB-206ENST00000444452 ZEB1P37275 1124 aaPredicted RBP34.8■■■■□ 3.16
PREB-206ENST00000444452 CUX1P39880 1505 aa34.71■■■■□ 3.15
PREB-206ENST00000444452 PRDM2Q13029 1718 aa34.69■■■■□ 3.14
PREB-206ENST00000444452 RAPGEF2Q9Y4G8 1499 aa34.64■■■■□ 3.14
PREB-206ENST00000444452 CC2D2AQ9P2K1 1620 aa34.61■■■■□ 3.13
PREB-206ENST00000444452 CLIP1P30622 1438 aa34.56■■■■□ 3.12
PREB-206ENST00000444452 ERICH3Q5RHP9 1530 aa34.55■■■■□ 3.12
PREB-206ENST00000444452 CADPSQ9ULU8 1353 aa34.53■■■■□ 3.12
PREB-206ENST00000444452 PRXQ9BXM0 1461 aa34.52■■■■□ 3.12
PREB-206ENST00000444452 KIF27Q86VH2 1401 aa34.45■■■■□ 3.11
PREB-206ENST00000444452 VPS8Q8N3P4 1428 aa34.42■■■■□ 3.1
PREB-206ENST00000444452 TTBK1Q5TCY1 1321 aaPredicted RBP34.26■■■■□ 3.08
PREB-206ENST00000444452 FANCD2Q9BXW9 1451 aa34.17■■■■□ 3.06
PREB-206ENST00000444452 FGD5Q6ZNL6 1462 aa34.16■■■■□ 3.06
PREB-206ENST00000444452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.15■■■■□ 3.06
PREB-206ENST00000444452 CUX2O14529 1486 aa34.15■■■■□ 3.06
PREB-206ENST00000444452 CCER1Q8TC90 406 aaPredicted RBP34.12■■■■□ 3.05
PREB-206ENST00000444452 ARAP1Q96P48 1450 aa34.1■■■■□ 3.05
PREB-206ENST00000444452 APLP2Q06481 763 aa34.07■■■■□ 3.04
PREB-206ENST00000444452 IGF1RP08069 1367 aa34.06■■■■□ 3.04
PREB-206ENST00000444452 DNMBPQ6XZF7 1577 aa34.03■■■■□ 3.04
PREB-206ENST00000444452 RANGAP1P46060 587 aaPredicted RBP34.03■■■■□ 3.04
PREB-206ENST00000444452 LAMC3Q9Y6N6 1575 aa33.95■■■■□ 3.03
PREB-206ENST00000444452 NESP48681 1621 aa33.93■■■■□ 3.02
PREB-206ENST00000444452 TOPBP1Q92547 1522 aa33.92■■■■□ 3.02
PREB-206ENST00000444452 CARMIL1Q5VZK9 1371 aa33.9■■■■□ 3.02
PREB-206ENST00000444452 ARHGAP35Q9NRY4 1499 aa33.9■■■■□ 3.02
PREB-206ENST00000444452 ABCA10Q8WWZ4 1543 aa33.87■■■■□ 3.01
PREB-206ENST00000444452 POLA1P09884 1462 aaPredicted RBP33.85■■■■□ 3.01
PREB-206ENST00000444452 RAD54L2Q9Y4B4 1467 aa33.76■■■□□ 2.99
PREB-206ENST00000444452 URB2Q14146 1524 aaKnown RBP33.69■■■□□ 2.98
PREB-206ENST00000444452 HNRNPUL2Q1KMD3 747 aaKnown RBP33.69■■■□□ 2.98
PREB-206ENST00000444452 PDS5BQ9NTI5 1447 aa33.67■■■□□ 2.98
PREB-206ENST00000444452 CUL7Q14999 1698 aa33.66■■■□□ 2.98
PREB-206ENST00000444452 WDR97A6NE52 1622 aa33.65■■■□□ 2.98
PREB-206ENST00000444452 KANK4Q5T7N3 995 aaPredicted RBP33.64■■■□□ 2.98
PREB-206ENST00000444452 MAP3K1Q13233 1512 aa33.6■■■□□ 2.97
PREB-206ENST00000444452 RRBP1Q9P2E9 1410 aaKnown RBP33.57■■■□□ 2.96
PREB-206ENST00000444452 ABCA5Q8WWZ7 1642 aa33.5■■■□□ 2.95
PREB-206ENST00000444452 TIAM1Q13009 1591 aa33.5■■■□□ 2.95
PREB-206ENST00000444452 DNAJC5BQ9UF47 199 aa33.5■■■□□ 2.95
PREB-206ENST00000444452 FHAD1B1AJZ9 1412 aa33.49■■■□□ 2.95
PREB-206ENST00000444452 KIF21AQ7Z4S6 1674 aa33.48■■■□□ 2.95
PREB-206ENST00000444452 EFCAB5A4FU69 1503 aa33.46■■■□□ 2.95
PREB-206ENST00000444452 CTTNBP2Q8WZ74 1663 aa33.44■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms