RNA–Protein interactions for RNA: ENST00000557111.5

RPS29-206, Transcript of ribosomal protein S29, humanhuman

TSL 2 BASIC

Gene RPS29, Length 488 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-206ENST00000557111 NISCHQ9Y2I1 1504 aa42.4■■■■■ 4.38
RPS29-206ENST00000557111 CCDC180Q9P1Z9 1646 aa37.91■■■■□ 3.66
RPS29-206ENST00000557111 ABCC9O60706 1549 aa37.12■■■■□ 3.53
RPS29-206ENST00000557111 RB1CC1Q8TDY2 1594 aa35.72■■■■□ 3.31
RPS29-206ENST00000557111 NACADO15069 1562 aa35.61■■■■□ 3.29
RPS29-206ENST00000557111 DCAF8L2P0C7V8 631 aa35.35■■■■□ 3.25
RPS29-206ENST00000557111 MYO15BQ96JP2 1530 aa35.32■■■■□ 3.25
RPS29-206ENST00000557111 ZCCHC6Q5VYS8 1495 aaKnown RBP35.32■■■■□ 3.24
RPS29-206ENST00000557111 DCAF1Q9Y4B6 1507 aa35.11■■■■□ 3.21
RPS29-206ENST00000557111 UNC13AQ9UPW8 1703 aa34.98■■■■□ 3.19
RPS29-206ENST00000557111 BICRAQ9NZM4 1560 aa34.6■■■■□ 3.13
RPS29-206ENST00000557111 PABPN1Q86U42 306 aaKnown RBP eCLIP34.56■■■■□ 3.12
RPS29-206ENST00000557111 SCRIBQ14160 1630 aa34.52■■■■□ 3.12
RPS29-206ENST00000557111 SHROOM4Q9ULL8 1493 aa34.29■■■■□ 3.08
RPS29-206ENST00000557111 DNAJC5BQ9UF47 199 aa34.1■■■■□ 3.05
RPS29-206ENST00000557111 EIF4G1Q04637 1599 aaKnown RBP33.72■■■□□ 2.99
RPS29-206ENST00000557111 CC2D2AQ9P2K1 1620 aa33.64■■■□□ 2.98
RPS29-206ENST00000557111 CECR2Q9BXF3 1484 aa33.39■■■□□ 2.94
RPS29-206ENST00000557111 SMARCA4P51532 1647 aa33■■■□□ 2.87
RPS29-206ENST00000557111 BAZ1AQ9NRL2 1556 aaPredicted RBP32.92■■■□□ 2.86
RPS29-206ENST00000557111 SMARCA2P51531 1590 aa32.81■■■□□ 2.84
RPS29-206ENST00000557111 ATAD2BQ9ULI0 1458 aa32.79■■■□□ 2.84
RPS29-206ENST00000557111 NCAPD3P42695 1498 aa32.78■■■□□ 2.84
RPS29-206ENST00000557111 HMGXB3Q12766 1538 aa32.71■■■□□ 2.83
RPS29-206ENST00000557111 PEG3Q9GZU2 1588 aa32.67■■■□□ 2.82
RPS29-206ENST00000557111 MROH2BQ7Z745 1585 aa32.66■■■□□ 2.82
RPS29-206ENST00000557111 BAZ1BQ9UIG0 1483 aaKnown RBP32.55■■■□□ 2.8
RPS29-206ENST00000557111 WIZO95785 1651 aa32.35■■■□□ 2.77
RPS29-206ENST00000557111 RSF1Q96T23 1441 aaPredicted RBP32.17■■■□□ 2.74
RPS29-206ENST00000557111 NESP48681 1621 aa32.07■■■□□ 2.72
RPS29-206ENST00000557111 ERCC6Q03468 1493 aa32.05■■■□□ 2.72
RPS29-206ENST00000557111 LAMC3Q9Y6N6 1575 aa32.05■■■□□ 2.72
RPS29-206ENST00000557111 TOP2AP11388 1531 aaKnown RBP32■■■□□ 2.71
RPS29-206ENST00000557111 KIF21AQ7Z4S6 1674 aa31.81■■■□□ 2.68
RPS29-206ENST00000557111 CADPSQ9ULU8 1353 aa31.81■■■□□ 2.68
RPS29-206ENST00000557111 CUX2O14529 1486 aa31.8■■■□□ 2.68
RPS29-206ENST00000557111 PDS5BQ9NTI5 1447 aa31.75■■■□□ 2.67
RPS29-206ENST00000557111 THOC2Q8NI27 1593 aaKnown RBP31.73■■■□□ 2.67
RPS29-206ENST00000557111 CFTRP13569 1480 aa31.6■■■□□ 2.65
RPS29-206ENST00000557111 PRDM2Q13029 1718 aa31.57■■■□□ 2.64
RPS29-206ENST00000557111 CCDC88BA6NC98 1476 aa31.54■■■□□ 2.64
RPS29-206ENST00000557111 CEP164Q9UPV0 1460 aa31.51■■■□□ 2.63
RPS29-206ENST00000557111 FANCD2Q9BXW9 1451 aa31.49■■■□□ 2.63
RPS29-206ENST00000557111 MRC2Q9UBG0 1479 aa31.49■■■□□ 2.63
RPS29-206ENST00000557111 WDR62O43379 1518 aa31.42■■■□□ 2.62
RPS29-206ENST00000557111 DNAJC5Q9H3Z4 198 aa31.21■■■□□ 2.59
RPS29-206ENST00000557111 URB2Q14146 1524 aaKnown RBP31.19■■■□□ 2.58
RPS29-206ENST00000557111 AEBP2Q6ZN18 517 aaPredicted RBP31.17■■■□□ 2.58
RPS29-206ENST00000557111 SUPT5HO00267 1087 aaKnown RBP31.14■■■□□ 2.58
RPS29-206ENST00000557111 TOPBP1Q92547 1522 aa30.98■■■□□ 2.55
RPS29-206ENST00000557111 DNMBPQ6XZF7 1577 aa30.97■■■□□ 2.55
RPS29-206ENST00000557111 ABCC8Q09428 1581 aa30.96■■■□□ 2.55
RPS29-206ENST00000557111 IFT140Q96RY7 1462 aa30.82■■■□□ 2.53
RPS29-206ENST00000557111 POLA1P09884 1462 aaPredicted RBP30.7■■■□□ 2.5
RPS29-206ENST00000557111 TARBP1Q13395 1621 aaKnown RBP30.68■■■□□ 2.5
RPS29-206ENST00000557111 ZNF608Q9ULD9 1512 aaPredicted RBP30.68■■■□□ 2.5
RPS29-206ENST00000557111 CUX1P39880 1505 aa30.67■■■□□ 2.5
RPS29-206ENST00000557111 EIF4G3O43432 1585 aaKnown RBP30.66■■■□□ 2.5
RPS29-206ENST00000557111 FGD5Q6ZNL6 1462 aa30.6■■■□□ 2.49
RPS29-206ENST00000557111 RAD54L2Q9Y4B4 1467 aa30.52■■■□□ 2.48
RPS29-206ENST00000557111 SOGA1O94964 1423 aa30.5■■■□□ 2.47
RPS29-206ENST00000557111 WDR97A6NE52 1622 aa30.5■■■□□ 2.47
RPS29-206ENST00000557111 AQRO60306 1485 aaKnown RBP eCLIP30.44■■■□□ 2.467e-11■■■■■ 26.9
RPS29-206ENST00000557111 BIVM-ERCC5R4GMW8 1640 aa30.44■■■□□ 2.46
RPS29-206ENST00000557111 TOP2BQ02880 1626 aa30.4■■■□□ 2.46
RPS29-206ENST00000557111 WRNQ14191 1432 aaPredicted RBP eCLIP30.38■■■□□ 2.452e-7■□□□□ 9.9
RPS29-206ENST00000557111 SYNJ1O43426 1573 aa30.37■■■□□ 2.45
RPS29-206ENST00000557111 CHD1O14646 1710 aa30.33■■■□□ 2.45
RPS29-206ENST00000557111 TDRD9Q8NDG6 1382 aaKnown RBP30.33■■■□□ 2.45
RPS29-206ENST00000557111 OSCARQ8IYS5 282 aa30.31■■■□□ 2.44
RPS29-206ENST00000557111 ABCA10Q8WWZ4 1543 aa30.29■■■□□ 2.44
RPS29-206ENST00000557111 PBRM1Q86U86 1689 aa30.29■■■□□ 2.44
RPS29-206ENST00000557111 ABCA5Q8WWZ7 1642 aa30.25■■■□□ 2.43
RPS29-206ENST00000557111 SNAPC4Q5SXM2 1469 aa30.24■■■□□ 2.43
RPS29-206ENST00000557111 GRIN2BQ13224 1484 aa30.23■■■□□ 2.43
RPS29-206ENST00000557111 GAPVD1Q14C86 1478 aa30.19■■■□□ 2.42
RPS29-206ENST00000557111 MAGI1Q96QZ7 1491 aaPredicted RBP30.19■■■□□ 2.42
RPS29-206ENST00000557111 FBLN2P98095 1184 aa30.08■■■□□ 2.41
RPS29-206ENST00000557111 SYNJ2O15056 1496 aa30.06■■■□□ 2.4
RPS29-206ENST00000557111 RIMBP3CA6NJZ7 1639 aa30.01■■■□□ 2.39
RPS29-206ENST00000557111 RIMBP3BA6NNM3 1639 aa30.01■■■□□ 2.39
RPS29-206ENST00000557111 RIMBP3Q9UFD9 1639 aa30.01■■■□□ 2.39
RPS29-206ENST00000557111 ADAMTS12P58397 1594 aa29.98■■■□□ 2.39
RPS29-206ENST00000557111 CHMP7Q8WUX9 453 aaPredicted RBP29.97■■■□□ 2.39
RPS29-206ENST00000557111 ERICH3Q5RHP9 1530 aa29.96■■■□□ 2.39
RPS29-206ENST00000557111 TRIM41Q8WV44 630 aa29.95■■■□□ 2.39
RPS29-206ENST00000557111 ARHGEF11O15085 1522 aa29.95■■■□□ 2.38
RPS29-206ENST00000557111 CLASP1Q7Z460 1538 aa29.94■■■□□ 2.38
RPS29-206ENST00000557111 GRIN2AQ12879 1464 aa29.85■■■□□ 2.37
RPS29-206ENST00000557111 FHAD1B1AJZ9 1412 aa29.84■■■□□ 2.37
RPS29-206ENST00000557111 KIF27Q86VH2 1401 aa29.76■■■□□ 2.35
RPS29-206ENST00000557111 CEP170Q5SW79 1584 aa29.73■■■□□ 2.35
RPS29-206ENST00000557111 NUP160Q12769 1436 aa29.71■■■□□ 2.35
RPS29-206ENST00000557111 CUL7Q14999 1698 aa29.71■■■□□ 2.35
RPS29-206ENST00000557111 ARAP1Q96P48 1450 aa29.68■■■□□ 2.34
RPS29-206ENST00000557111 IGF1RP08069 1367 aa29.58■■■□□ 2.33
RPS29-206ENST00000557111 SHROOM2Q13796 1616 aa29.58■■■□□ 2.33
RPS29-206ENST00000557111 RUSC2Q8N2Y8 1516 aa29.55■■■□□ 2.32
RPS29-206ENST00000557111 CYB5RLQ6IPT4 315 aa29.55■■■□□ 2.32
RPS29-206ENST00000557111 ERCC6L2Q5T890 1561 aa29.46■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms