RNA–Protein interactions for RNA: ENST00000509696.5

GRPEL1-203, Transcript of GrpE like 1, mitochondrial, humanhuman

TSL 2

Gene GRPEL1, Length 884 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRPEL1-203ENST00000509696 NISCHQ9Y2I1 1504 aa31.41■■■□□ 2.62
GRPEL1-203ENST00000509696 ABCC9O60706 1549 aa28.28■■■□□ 2.12
GRPEL1-203ENST00000509696 CCDC180Q9P1Z9 1646 aa28.25■■■□□ 2.11
GRPEL1-203ENST00000509696 AEBP2Q6ZN18 517 aaPredicted RBP27.7■■■□□ 2.02
GRPEL1-203ENST00000509696 RB1CC1Q8TDY2 1594 aa26.93■■□□□ 1.9
GRPEL1-203ENST00000509696 NACADO15069 1562 aa26.71■■□□□ 1.87
GRPEL1-203ENST00000509696 CHIC1Q5VXU3 224 aa26.7■■□□□ 1.86
GRPEL1-203ENST00000509696 DCAF8L2P0C7V8 631 aa26.67■■□□□ 1.86
GRPEL1-203ENST00000509696 DNAJC5BQ9UF47 199 aa26.48■■□□□ 1.83
GRPEL1-203ENST00000509696 PABPN1Q86U42 306 aaKnown RBP eCLIP26.32■■□□□ 1.8
GRPEL1-203ENST00000509696 UNC13AQ9UPW8 1703 aa26.28■■□□□ 1.8
GRPEL1-203ENST00000509696 MYO15BQ96JP2 1530 aa26.28■■□□□ 1.8
GRPEL1-203ENST00000509696 BICRAQ9NZM4 1560 aa26.04■■□□□ 1.76
GRPEL1-203ENST00000509696 ZCCHC6Q5VYS8 1495 aaKnown RBP25.99■■□□□ 1.75
GRPEL1-203ENST00000509696 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
GRPEL1-203ENST00000509696 SHROOM4Q9ULL8 1493 aa25.75■■□□□ 1.71
GRPEL1-203ENST00000509696 SCRIBQ14160 1630 aa25.73■■□□□ 1.71
GRPEL1-203ENST00000509696 CC2D2AQ9P2K1 1620 aa25.54■■□□□ 1.68
GRPEL1-203ENST00000509696 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
GRPEL1-203ENST00000509696 EIF4G1Q04637 1599 aaKnown RBP25.46■■□□□ 1.67
GRPEL1-203ENST00000509696 NCAPD3P42695 1498 aa24.62■■□□□ 1.53
GRPEL1-203ENST00000509696 ATAD2BQ9ULI0 1458 aa24.53■■□□□ 1.52
GRPEL1-203ENST00000509696 SMARCA4P51532 1647 aa24.53■■□□□ 1.52
GRPEL1-203ENST00000509696 SMARCA2P51531 1590 aa24.52■■□□□ 1.52
GRPEL1-203ENST00000509696 ERCC6Q03468 1493 aa24.48■■□□□ 1.51
GRPEL1-203ENST00000509696 HMGXB3Q12766 1538 aa24.45■■□□□ 1.5
GRPEL1-203ENST00000509696 BAZ1AQ9NRL2 1556 aaPredicted RBP24.42■■□□□ 1.5
GRPEL1-203ENST00000509696 DNAJC5Q9H3Z4 198 aa24.42■■□□□ 1.5
GRPEL1-203ENST00000509696 CUX2O14529 1486 aa24.39■■□□□ 1.5
GRPEL1-203ENST00000509696 BAZ1BQ9UIG0 1483 aaKnown RBP24.35■■□□□ 1.49
GRPEL1-203ENST00000509696 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
GRPEL1-203ENST00000509696 NESP48681 1621 aa24.24■■□□□ 1.47
GRPEL1-203ENST00000509696 MROH2BQ7Z745 1585 aa24.18■■□□□ 1.46
GRPEL1-203ENST00000509696 LAMC3Q9Y6N6 1575 aa24.12■■□□□ 1.45
GRPEL1-203ENST00000509696 PDS5BQ9NTI5 1447 aa24.01■■□□□ 1.43
GRPEL1-203ENST00000509696 THOC2Q8NI27 1593 aaKnown RBP24■■□□□ 1.43
GRPEL1-203ENST00000509696 KIF21AQ7Z4S6 1674 aa23.98■■□□□ 1.43
GRPEL1-203ENST00000509696 WIZO95785 1651 aa23.92■■□□□ 1.42
GRPEL1-203ENST00000509696 CADPSQ9ULU8 1353 aa23.9■■□□□ 1.42
GRPEL1-203ENST00000509696 MRC2Q9UBG0 1479 aa23.77■■□□□ 1.4
GRPEL1-203ENST00000509696 CEP164Q9UPV0 1460 aa23.68■■□□□ 1.38
GRPEL1-203ENST00000509696 WDR62O43379 1518 aa23.68■■□□□ 1.38
GRPEL1-203ENST00000509696 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
GRPEL1-203ENST00000509696 FANCD2Q9BXW9 1451 aa23.63■■□□□ 1.37
GRPEL1-203ENST00000509696 TOP2AP11388 1531 aaKnown RBP23.62■■□□□ 1.37
GRPEL1-203ENST00000509696 CFTRP13569 1480 aa23.59■■□□□ 1.37
GRPEL1-203ENST00000509696 PHF23Q9BUL5 403 aaPredicted RBP23.5■■□□□ 1.35
GRPEL1-203ENST00000509696 PRDM2Q13029 1718 aa23.43■■□□□ 1.34
GRPEL1-203ENST00000509696 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
GRPEL1-203ENST00000509696 SENP3Q9H4L4 574 aaPredicted RBP23.41■■□□□ 1.34
GRPEL1-203ENST00000509696 URB2Q14146 1524 aaKnown RBP23.39■■□□□ 1.34
GRPEL1-203ENST00000509696 CCDC88BA6NC98 1476 aa23.34■■□□□ 1.33
GRPEL1-203ENST00000509696 OSCARQ8IYS5 282 aa23.33■■□□□ 1.33
GRPEL1-203ENST00000509696 IFT140Q96RY7 1462 aa23.2■■□□□ 1.3
GRPEL1-203ENST00000509696 ABCC8Q09428 1581 aa23.18■■□□□ 1.3
GRPEL1-203ENST00000509696 TOPBP1Q92547 1522 aa23.16■■□□□ 1.3
GRPEL1-203ENST00000509696 ZNF608Q9ULD9 1512 aaPredicted RBP23.11■■□□□ 1.29
GRPEL1-203ENST00000509696 DNMBPQ6XZF7 1577 aa23.1■■□□□ 1.29
GRPEL1-203ENST00000509696 EIF4G3O43432 1585 aaKnown RBP23.02■■□□□ 1.28
GRPEL1-203ENST00000509696 RIMBP3CA6NJZ7 1639 aa22.97■■□□□ 1.27
GRPEL1-203ENST00000509696 RIMBP3BA6NNM3 1639 aa22.97■■□□□ 1.27
GRPEL1-203ENST00000509696 RIMBP3Q9UFD9 1639 aa22.97■■□□□ 1.27
GRPEL1-203ENST00000509696 TARBP1Q13395 1621 aaKnown RBP22.95■■□□□ 1.26
GRPEL1-203ENST00000509696 AQRO60306 1485 aaKnown RBP eCLIP22.93■■□□□ 1.266e-6■■■■□ 25.1
GRPEL1-203ENST00000509696 POLA1P09884 1462 aaPredicted RBP22.91■■□□□ 1.26
GRPEL1-203ENST00000509696 CHD1O14646 1710 aa22.89■■□□□ 1.26
GRPEL1-203ENST00000509696 FBLN2P98095 1184 aa22.89■■□□□ 1.25
GRPEL1-203ENST00000509696 ARHGEF11O15085 1522 aa22.88■■□□□ 1.25
GRPEL1-203ENST00000509696 SOGA1O94964 1423 aa22.86■■□□□ 1.25
GRPEL1-203ENST00000509696 RAD54L2Q9Y4B4 1467 aa22.84■■□□□ 1.25
GRPEL1-203ENST00000509696 TDRD9Q8NDG6 1382 aaKnown RBP22.79■■□□□ 1.24
GRPEL1-203ENST00000509696 FGD5Q6ZNL6 1462 aa22.79■■□□□ 1.24
GRPEL1-203ENST00000509696 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
GRPEL1-203ENST00000509696 WDR97A6NE52 1622 aa22.76■■□□□ 1.23
GRPEL1-203ENST00000509696 CUX1P39880 1505 aa22.72■■□□□ 1.23
GRPEL1-203ENST00000509696 CHMP7Q8WUX9 453 aaPredicted RBP22.7■■□□□ 1.22
GRPEL1-203ENST00000509696 SNAPC4Q5SXM2 1469 aa22.7■■□□□ 1.22
GRPEL1-203ENST00000509696 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
GRPEL1-203ENST00000509696 GRIN2BQ13224 1484 aa22.66■■□□□ 1.22
GRPEL1-203ENST00000509696 MAGI1Q96QZ7 1491 aaPredicted RBP22.66■■□□□ 1.22
GRPEL1-203ENST00000509696 ARAP1Q96P48 1450 aa22.63■■□□□ 1.21
GRPEL1-203ENST00000509696 SYNJ1O43426 1573 aa22.63■■□□□ 1.21
GRPEL1-203ENST00000509696 TRHP20396 242 aaPredicted RBP22.6■■□□□ 1.21
GRPEL1-203ENST00000509696 PBRM1Q86U86 1689 aa22.58■■□□□ 1.21
GRPEL1-203ENST00000509696 SYNJ2O15056 1496 aa22.58■■□□□ 1.2
GRPEL1-203ENST00000509696 GAPVD1Q14C86 1478 aa22.57■■□□□ 1.2
GRPEL1-203ENST00000509696 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
GRPEL1-203ENST00000509696 ABCA10Q8WWZ4 1543 aa22.51■■□□□ 1.19
GRPEL1-203ENST00000509696 ABCA5Q8WWZ7 1642 aa22.47■■□□□ 1.19
GRPEL1-203ENST00000509696 WRNQ14191 1432 aaPredicted RBP eCLIP22.46■■□□□ 1.19
GRPEL1-203ENST00000509696 TOP2BQ02880 1626 aa22.39■■□□□ 1.17
GRPEL1-203ENST00000509696 BIVM-ERCC5R4GMW8 1640 aa22.39■■□□□ 1.17
GRPEL1-203ENST00000509696 GRIN2AQ12879 1464 aa22.34■■□□□ 1.17
GRPEL1-203ENST00000509696 ADAMTS12P58397 1594 aa22.32■■□□□ 1.16
GRPEL1-203ENST00000509696 FHAD1B1AJZ9 1412 aa22.28■■□□□ 1.16
GRPEL1-203ENST00000509696 CEP170Q5SW79 1584 aa22.25■■□□□ 1.15
GRPEL1-203ENST00000509696 ERICH3Q5RHP9 1530 aa22.25■■□□□ 1.15
GRPEL1-203ENST00000509696 NUP160Q12769 1436 aa22.23■■□□□ 1.15
GRPEL1-203ENST00000509696 ERCC6L2Q5T890 1561 aa22.2■■□□□ 1.14
GRPEL1-203ENST00000509696 SHROOM2Q13796 1616 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms