RNA–Protein interactions for RNA: ENST00000574770.5

EDC4-208, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 5

Gene EDC4, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-208ENST00000574770 NISCHQ9Y2I1 1504 aa33.89■■■■□ 3.02
EDC4-208ENST00000574770 CCDC180Q9P1Z9 1646 aa29.85■■■□□ 2.37
EDC4-208ENST00000574770 ABCC9O60706 1549 aa28.92■■■□□ 2.22
EDC4-208ENST00000574770 ZCCHC6Q5VYS8 1495 aaKnown RBP28.37■■■□□ 2.13
EDC4-208ENST00000574770 DCAF1Q9Y4B6 1507 aa28.15■■■□□ 2.1
EDC4-208ENST00000574770 DNAJC5BQ9UF47 199 aa28.09■■■□□ 2.09
EDC4-208ENST00000574770 MYO15BQ96JP2 1530 aa28.02■■■□□ 2.08
EDC4-208ENST00000574770 DCAF8L2P0C7V8 631 aa28■■■□□ 2.07
EDC4-208ENST00000574770 NACADO15069 1562 aa27.91■■■□□ 2.06
EDC4-208ENST00000574770 RB1CC1Q8TDY2 1594 aa27.74■■■□□ 2.03
EDC4-208ENST00000574770 SCRIBQ14160 1630 aa27.18■■□□□ 1.94
EDC4-208ENST00000574770 SHROOM4Q9ULL8 1493 aa27.1■■□□□ 1.93
EDC4-208ENST00000574770 UNC13AQ9UPW8 1703 aa27.02■■□□□ 1.92
EDC4-208ENST00000574770 PABPN1Q86U42 306 aaKnown RBP eCLIP26.86■■□□□ 1.89
EDC4-208ENST00000574770 BICRAQ9NZM4 1560 aa26.78■■□□□ 1.88
EDC4-208ENST00000574770 DNAJC5Q9H3Z4 198 aa26.31■■□□□ 1.8
EDC4-208ENST00000574770 BAZ1AQ9NRL2 1556 aaPredicted RBP26.26■■□□□ 1.79
EDC4-208ENST00000574770 CECR2Q9BXF3 1484 aa26.24■■□□□ 1.79
EDC4-208ENST00000574770 SMARCA4P51532 1647 aa26.12■■□□□ 1.77
EDC4-208ENST00000574770 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.76
EDC4-208ENST00000574770 RSF1Q96T23 1441 aaPredicted RBP26.07■■□□□ 1.76
EDC4-208ENST00000574770 EIF4G1Q04637 1599 aaKnown RBP26.05■■□□□ 1.76
EDC4-208ENST00000574770 CC2D2AQ9P2K1 1620 aa26.03■■□□□ 1.76
EDC4-208ENST00000574770 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
EDC4-208ENST00000574770 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
EDC4-208ENST00000574770 SMARCA2P51531 1590 aa25.87■■□□□ 1.73
EDC4-208ENST00000574770 WIZO95785 1651 aa25.81■■□□□ 1.72
EDC4-208ENST00000574770 ATAD2BQ9ULI0 1458 aa25.81■■□□□ 1.72
EDC4-208ENST00000574770 NCAPD3P42695 1498 aa25.72■■□□□ 1.71
EDC4-208ENST00000574770 TOP2AP11388 1531 aaKnown RBP25.66■■□□□ 1.7
EDC4-208ENST00000574770 HMGXB3Q12766 1538 aa25.66■■□□□ 1.7
EDC4-208ENST00000574770 BAZ1BQ9UIG0 1483 aaKnown RBP25.65■■□□□ 1.7
EDC4-208ENST00000574770 CCDC88BA6NC98 1476 aa25.33■■□□□ 1.65
EDC4-208ENST00000574770 CUX2O14529 1486 aa25.17■■□□□ 1.62
EDC4-208ENST00000574770 CADPSQ9ULU8 1353 aa25.01■■□□□ 1.59
EDC4-208ENST00000574770 CFTRP13569 1480 aa25■■□□□ 1.59
EDC4-208ENST00000574770 LAMC3Q9Y6N6 1575 aa24.94■■□□□ 1.58
EDC4-208ENST00000574770 ERCC6Q03468 1493 aa24.93■■□□□ 1.58
EDC4-208ENST00000574770 PRDM2Q13029 1718 aa24.88■■□□□ 1.57
EDC4-208ENST00000574770 TRIM41Q8WV44 630 aa24.79■■□□□ 1.56
EDC4-208ENST00000574770 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
EDC4-208ENST00000574770 NESP48681 1621 aa24.75■■□□□ 1.55
EDC4-208ENST00000574770 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
EDC4-208ENST00000574770 CHIC1Q5VXU3 224 aa24.67■■□□□ 1.54
EDC4-208ENST00000574770 CEP164Q9UPV0 1460 aa24.61■■□□□ 1.53
EDC4-208ENST00000574770 WRNQ14191 1432 aaPredicted RBP eCLIP24.59■■□□□ 1.53
EDC4-208ENST00000574770 ABCC8Q09428 1581 aa24.55■■□□□ 1.52
EDC4-208ENST00000574770 KIF21AQ7Z4S6 1674 aa24.51■■□□□ 1.51
EDC4-208ENST00000574770 THOC2Q8NI27 1593 aaKnown RBP24.46■■□□□ 1.51
EDC4-208ENST00000574770 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
EDC4-208ENST00000574770 BIVM-ERCC5R4GMW8 1640 aa24.44■■□□□ 1.5
EDC4-208ENST00000574770 DNMBPQ6XZF7 1577 aa24.43■■□□□ 1.5
EDC4-208ENST00000574770 CUX1P39880 1505 aa24.42■■□□□ 1.5
EDC4-208ENST00000574770 SYNJ1O43426 1573 aa24.42■■□□□ 1.5
EDC4-208ENST00000574770 MRC2Q9UBG0 1479 aa24.42■■□□□ 1.5
EDC4-208ENST00000574770 TOPBP1Q92547 1522 aa24.36■■□□□ 1.49
EDC4-208ENST00000574770 URB2Q14146 1524 aaKnown RBP24.35■■□□□ 1.49
EDC4-208ENST00000574770 WDR62O43379 1518 aa24.3■■□□□ 1.48
EDC4-208ENST00000574770 FGD5Q6ZNL6 1462 aa24.25■■□□□ 1.47
EDC4-208ENST00000574770 POLA1P09884 1462 aaPredicted RBP24.2■■□□□ 1.46
EDC4-208ENST00000574770 SOGA1O94964 1423 aa24.16■■□□□ 1.46
EDC4-208ENST00000574770 EEA1Q15075 1411 aa24.15■■□□□ 1.46
EDC4-208ENST00000574770 ABCA10Q8WWZ4 1543 aa24.1■■□□□ 1.45
EDC4-208ENST00000574770 IFT140Q96RY7 1462 aa24.09■■□□□ 1.45
EDC4-208ENST00000574770 KIF27Q86VH2 1401 aa24.06■■□□□ 1.44
EDC4-208ENST00000574770 RAD54L2Q9Y4B4 1467 aa24.05■■□□□ 1.44
EDC4-208ENST00000574770 TARBP1Q13395 1621 aaKnown RBP24.04■■□□□ 1.44
EDC4-208ENST00000574770 WDR97A6NE52 1622 aa24.01■■□□□ 1.43
EDC4-208ENST00000574770 CSRNP3Q8WYN3 585 aa23.95■■□□□ 1.42
EDC4-208ENST00000574770 OSCARQ8IYS5 282 aa23.94■■□□□ 1.42
EDC4-208ENST00000574770 RUSC2Q8N2Y8 1516 aa23.92■■□□□ 1.42
EDC4-208ENST00000574770 FAM9AQ8IZU1 332 aaPredicted RBP23.92■■□□□ 1.42
EDC4-208ENST00000574770 ABCA5Q8WWZ7 1642 aa23.89■■□□□ 1.41
EDC4-208ENST00000574770 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
EDC4-208ENST00000574770 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
EDC4-208ENST00000574770 ERICH3Q5RHP9 1530 aa23.83■■□□□ 1.41
EDC4-208ENST00000574770 IGF1RP08069 1367 aa23.83■■□□□ 1.41
EDC4-208ENST00000574770 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
EDC4-208ENST00000574770 ZNF608Q9ULD9 1512 aaPredicted RBP23.8■■□□□ 1.4
EDC4-208ENST00000574770 AQRO60306 1485 aaKnown RBP eCLIP23.8■■□□□ 1.42e-6■□□□□ 10.6
EDC4-208ENST00000574770 EIF4G3O43432 1585 aaKnown RBP23.77■■□□□ 1.4
EDC4-208ENST00000574770 CUL7Q14999 1698 aa23.77■■□□□ 1.4
EDC4-208ENST00000574770 KIF21BO75037 1637 aa23.76■■□□□ 1.39
EDC4-208ENST00000574770 PBRM1Q86U86 1689 aa23.75■■□□□ 1.39
EDC4-208ENST00000574770 PRXQ9BXM0 1461 aa23.74■■□□□ 1.39
EDC4-208ENST00000574770 RIMBP3CA6NJZ7 1639 aa23.73■■□□□ 1.39
EDC4-208ENST00000574770 RIMBP3BA6NNM3 1639 aa23.73■■□□□ 1.39
EDC4-208ENST00000574770 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
EDC4-208ENST00000574770 RIMBP3Q9UFD9 1639 aa23.73■■□□□ 1.39
EDC4-208ENST00000574770 GOLGA3Q08378 1498 aa23.7■■□□□ 1.38
EDC4-208ENST00000574770 MAGI1Q96QZ7 1491 aaPredicted RBP23.67■■□□□ 1.38
EDC4-208ENST00000574770 RAPGEF2Q9Y4G8 1499 aa23.67■■□□□ 1.38
EDC4-208ENST00000574770 FHAD1B1AJZ9 1412 aa23.66■■□□□ 1.38
EDC4-208ENST00000574770 ADAMTS12P58397 1594 aa23.61■■□□□ 1.37
EDC4-208ENST00000574770 SNAPC4Q5SXM2 1469 aa23.6■■□□□ 1.37
EDC4-208ENST00000574770 LOC105371045A0A1W2PR82 267 aa23.59■■□□□ 1.37
EDC4-208ENST00000574770 UBTFP17480 764 aaKnown RBP23.57■■□□□ 1.36
EDC4-208ENST00000574770 ARHGEF11O15085 1522 aa23.56■■□□□ 1.36
EDC4-208ENST00000574770 TNIKQ9UKE5 1360 aa23.55■■□□□ 1.36
EDC4-208ENST00000574770 SYNJ2O15056 1496 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms