RNA–Protein interactions for RNA: ENST00000295156.8

VSNL1-201, Transcript of visinin like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSNL1, Length 1,892 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSNL1-201ENST00000295156 AEBP2Q6ZN18 517 aaPredicted RBP24.01■■□□□ 1.43
VSNL1-201ENST00000295156 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
VSNL1-201ENST00000295156 NISCHQ9Y2I1 1504 aa21.63■■□□□ 1.05
VSNL1-201ENST00000295156 PHF23Q9BUL5 403 aaPredicted RBP20.82■□□□□ 0.92
VSNL1-201ENST00000295156 SENP3Q9H4L4 574 aaPredicted RBP20.18■□□□□ 0.82
VSNL1-201ENST00000295156 PLPPR3Q6T4P5 718 aa19.17■□□□□ 0.66
VSNL1-201ENST00000295156 FOXD1Q16676 465 aa18.82■□□□□ 0.6
VSNL1-201ENST00000295156 CCDC180Q9P1Z9 1646 aa18.67■□□□□ 0.58
VSNL1-201ENST00000295156 ZCCHC6Q5VYS8 1495 aaKnown RBP18.34■□□□□ 0.53
VSNL1-201ENST00000295156 PPP6R1Q9UPN7 881 aa18.33■□□□□ 0.53
VSNL1-201ENST00000295156 ADRA2BP18089 450 aa18.3■□□□□ 0.52
VSNL1-201ENST00000295156 DCAF1Q9Y4B6 1507 aa18.04■□□□□ 0.48
VSNL1-201ENST00000295156 SHROOM4Q9ULL8 1493 aa17.86■□□□□ 0.45
VSNL1-201ENST00000295156 PIAS4Q8N2W9 510 aaPredicted RBP17.76■□□□□ 0.43
VSNL1-201ENST00000295156 MYO15BQ96JP2 1530 aa17.63■□□□□ 0.41
VSNL1-201ENST00000295156 SUPT5HO00267 1087 aaKnown RBP17.54■□□□□ 0.4
VSNL1-201ENST00000295156 DCAF8L2P0C7V8 631 aa17.44■□□□□ 0.38
VSNL1-201ENST00000295156 ABCC9O60706 1549 aa17.29■□□□□ 0.36
VSNL1-201ENST00000295156 NACADO15069 1562 aa17.24■□□□□ 0.35
VSNL1-201ENST00000295156 MSH5O43196 834 aa17.14■□□□□ 0.33
VSNL1-201ENST00000295156 SCRIBQ14160 1630 aa17.07■□□□□ 0.32
VSNL1-201ENST00000295156 RSF1Q96T23 1441 aaPredicted RBP16.98■□□□□ 0.31
VSNL1-201ENST00000295156 PPP4R3CPQ6ZMV5 832 aa16.96■□□□□ 0.31
VSNL1-201ENST00000295156 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
VSNL1-201ENST00000295156 KCNA4P22459 653 aa16.88■□□□□ 0.29
VSNL1-201ENST00000295156 BAZ1AQ9NRL2 1556 aaPredicted RBP16.72■□□□□ 0.27
VSNL1-201ENST00000295156 MROH2BQ7Z745 1585 aa16.65■□□□□ 0.26
VSNL1-201ENST00000295156 CECR2Q9BXF3 1484 aa16.62■□□□□ 0.25
VSNL1-201ENST00000295156 HRCP23327 699 aa16.59■□□□□ 0.25
VSNL1-201ENST00000295156 MAPK8IP2Q13387 824 aaPredicted RBP16.58■□□□□ 0.24
VSNL1-201ENST00000295156 TRIM41Q8WV44 630 aa16.56■□□□□ 0.24
VSNL1-201ENST00000295156 SCAF1Q9H7N4 1312 aaKnown RBP16.56■□□□□ 0.24
VSNL1-201ENST00000295156 WIZO95785 1651 aa16.52■□□□□ 0.23
VSNL1-201ENST00000295156 TOP2AP11388 1531 aaKnown RBP16.52■□□□□ 0.23
VSNL1-201ENST00000295156 SMARCA4P51532 1647 aa16.49■□□□□ 0.23
VSNL1-201ENST00000295156 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
VSNL1-201ENST00000295156 EIF4G1Q04637 1599 aaKnown RBP16.45■□□□□ 0.22
VSNL1-201ENST00000295156 TRIM26Q12899 539 aaPredicted RBP16.42■□□□□ 0.22
VSNL1-201ENST00000295156 PCGF6Q9BYE7 350 aa16.42■□□□□ 0.22
VSNL1-201ENST00000295156 LOC105371045A0A1W2PR82 267 aa16.41■□□□□ 0.22
VSNL1-201ENST00000295156 UNC13AQ9UPW8 1703 aa16.41■□□□□ 0.22
VSNL1-201ENST00000295156 CNKSR2Q8WXI2 1034 aa16.39■□□□□ 0.21
VSNL1-201ENST00000295156 NPM3O75607 178 aaKnown RBP16.36■□□□□ 0.21
VSNL1-201ENST00000295156 PEG3Q9GZU2 1588 aa16.35■□□□□ 0.21
VSNL1-201ENST00000295156 SMARCA2P51531 1590 aa16.31■□□□□ 0.2
VSNL1-201ENST00000295156 EEA1Q15075 1411 aa16.29■□□□□ 0.2
VSNL1-201ENST00000295156 ZEB1P37275 1124 aaPredicted RBP16.27■□□□□ 0.19
VSNL1-201ENST00000295156 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
VSNL1-201ENST00000295156 BICRAQ9NZM4 1560 aa16.25■□□□□ 0.19
VSNL1-201ENST00000295156 DMRT2Q9Y5R5 561 aa16.17■□□□□ 0.18
VSNL1-201ENST00000295156 FAM9AQ8IZU1 332 aaPredicted RBP16.1■□□□□ 0.17
VSNL1-201ENST00000295156 WRNQ14191 1432 aaPredicted RBP eCLIP16.09■□□□□ 0.17
VSNL1-201ENST00000295156 ATAD2BQ9ULI0 1458 aa16.06■□□□□ 0.16
VSNL1-201ENST00000295156 TNIKQ9UKE5 1360 aa16.04■□□□□ 0.16
VSNL1-201ENST00000295156 ABCC8Q09428 1581 aa16.04■□□□□ 0.16
VSNL1-201ENST00000295156 SLC4A1APQ9BWU0 796 aaKnown RBP16.03■□□□□ 0.16
VSNL1-201ENST00000295156 BAZ1BQ9UIG0 1483 aaKnown RBP16.03■□□□□ 0.16
VSNL1-201ENST00000295156 RNF216Q9NWF9 866 aaPredicted RBP16.02■□□□□ 0.16
VSNL1-201ENST00000295156 GOLGA3Q08378 1498 aa15.98■□□□□ 0.15
VSNL1-201ENST00000295156 HMGXB3Q12766 1538 aa15.95■□□□□ 0.14
VSNL1-201ENST00000295156 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
VSNL1-201ENST00000295156 PABPN1Q86U42 306 aaKnown RBP eCLIP15.94■□□□□ 0.14
VSNL1-201ENST00000295156 KIF21BO75037 1637 aa15.94■□□□□ 0.14
VSNL1-201ENST00000295156 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
VSNL1-201ENST00000295156 CEP164Q9UPV0 1460 aa15.93■□□□□ 0.14
VSNL1-201ENST00000295156 HOXD11P31277 338 aaPredicted RBP15.92■□□□□ 0.14
VSNL1-201ENST00000295156 EHMT2Q96KQ7 1210 aa15.91■□□□□ 0.14
VSNL1-201ENST00000295156 SOGA1O94964 1423 aa15.89■□□□□ 0.13
VSNL1-201ENST00000295156 NCAPD3P42695 1498 aa15.86■□□□□ 0.13
VSNL1-201ENST00000295156 SYNJ1O43426 1573 aa15.84■□□□□ 0.13
VSNL1-201ENST00000295156 PPARGC1BQ86YN6 1023 aaKnown RBP15.84■□□□□ 0.13
VSNL1-201ENST00000295156 TOP2BQ02880 1626 aa15.82■□□□□ 0.12
VSNL1-201ENST00000295156 BIVM-ERCC5R4GMW8 1640 aa15.8■□□□□ 0.12
VSNL1-201ENST00000295156 ERICH3Q5RHP9 1530 aa15.75■□□□□ 0.11
VSNL1-201ENST00000295156 UBTFP17480 764 aaKnown RBP15.74■□□□□ 0.11
VSNL1-201ENST00000295156 DNAJC5BQ9UF47 199 aa15.73■□□□□ 0.11
VSNL1-201ENST00000295156 RUSC2Q8N2Y8 1516 aa15.73■□□□□ 0.11
VSNL1-201ENST00000295156 CLIP1P30622 1438 aa15.69■□□□□ 0.1
VSNL1-201ENST00000295156 VPS8Q8N3P4 1428 aa15.69■□□□□ 0.1
VSNL1-201ENST00000295156 CFTRP13569 1480 aa15.67■□□□□ 0.1
VSNL1-201ENST00000295156 PRDM2Q13029 1718 aa15.65■□□□□ 0.1
VSNL1-201ENST00000295156 PRXQ9BXM0 1461 aa15.62■□□□□ 0.09
VSNL1-201ENST00000295156 CCER1Q8TC90 406 aaPredicted RBP15.61■□□□□ 0.09
VSNL1-201ENST00000295156 KIF27Q86VH2 1401 aa15.6■□□□□ 0.09
VSNL1-201ENST00000295156 RAPGEF2Q9Y4G8 1499 aa15.58■□□□□ 0.09
VSNL1-201ENST00000295156 ZBTB22O15209 634 aa15.58■□□□□ 0.08
VSNL1-201ENST00000295156 APLP2Q06481 763 aa15.57■□□□□ 0.08
VSNL1-201ENST00000295156 CUX1P39880 1505 aa15.55■□□□□ 0.08
VSNL1-201ENST00000295156 DCAF8L1A6NGE4 600 aa15.5■□□□□ 0.07
VSNL1-201ENST00000295156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
VSNL1-201ENST00000295156 CADPSQ9ULU8 1353 aa15.47■□□□□ 0.07
VSNL1-201ENST00000295156 CLSPNQ9HAW4 1339 aa15.44■□□□□ 0.06
VSNL1-201ENST00000295156 SLC4A2P04920 1241 aa15.44■□□□□ 0.06
VSNL1-201ENST00000295156 ARAP1Q96P48 1450 aa15.41■□□□□ 0.06
VSNL1-201ENST00000295156 MAP3K1Q13233 1512 aa15.4■□□□□ 0.06
VSNL1-201ENST00000295156 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
VSNL1-201ENST00000295156 POTEDQ86YR6 584 aa15.35■□□□□ 0.05
VSNL1-201ENST00000295156 CUX2O14529 1486 aa15.34■□□□□ 0.05
VSNL1-201ENST00000295156 RRBP1Q9P2E9 1410 aaKnown RBP15.33■□□□□ 0.04
VSNL1-201ENST00000295156 CC2D2AQ9P2K1 1620 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms