RNA–Protein interactions for RNA: ENST00000559024.5

TM2D3-206, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 863 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-206ENST00000559024 AEBP2Q6ZN18 517 aaPredicted RBP26.07■■□□□ 1.76
TM2D3-206ENST00000559024 CHIC1Q5VXU3 224 aa24.88■■□□□ 1.57
TM2D3-206ENST00000559024 SENP3Q9H4L4 574 aaPredicted RBP22.11■■□□□ 1.13
TM2D3-206ENST00000559024 PHF23Q9BUL5 403 aaPredicted RBP21.92■■□□□ 1.1
TM2D3-206ENST00000559024 FOXD1Q16676 465 aa20.66■□□□□ 0.9
TM2D3-206ENST00000559024 PLPPR3Q6T4P5 718 aa19.94■□□□□ 0.78
TM2D3-206ENST00000559024 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
TM2D3-206ENST00000559024 ADRA2BP18089 450 aa19.44■□□□□ 0.7
TM2D3-206ENST00000559024 PIAS4Q8N2W9 510 aaPredicted RBP19.32■□□□□ 0.68
TM2D3-206ENST00000559024 MSH5O43196 834 aa19.18■□□□□ 0.66
TM2D3-206ENST00000559024 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
TM2D3-206ENST00000559024 NISCHQ9Y2I1 1504 aa17.94■□□□□ 0.46
TM2D3-206ENST00000559024 MAPK8IP2Q13387 824 aaPredicted RBP17.82■□□□□ 0.44
TM2D3-206ENST00000559024 SCAF1Q9H7N4 1312 aaKnown RBP17.68■□□□□ 0.42
TM2D3-206ENST00000559024 DMRT2Q9Y5R5 561 aa17.58■□□□□ 0.4
TM2D3-206ENST00000559024 PPP4R3CPQ6ZMV5 832 aa17.54■□□□□ 0.4
TM2D3-206ENST00000559024 CNKSR2Q8WXI2 1034 aa17.13■□□□□ 0.33
TM2D3-206ENST00000559024 HOXD11P31277 338 aaPredicted RBP17.01■□□□□ 0.31
TM2D3-206ENST00000559024 RNF216Q9NWF9 866 aaPredicted RBP16.93■□□□□ 0.3
TM2D3-206ENST00000559024 DCAF8L1A6NGE4 600 aa16.89■□□□□ 0.29
TM2D3-206ENST00000559024 ABCC9O60706 1549 aa16.89■□□□□ 0.29
TM2D3-206ENST00000559024 NCBP3Q53F19 620 aaKnown RBP16.86■□□□□ 0.29
TM2D3-206ENST00000559024 NPM3O75607 178 aaKnown RBP16.69■□□□□ 0.26
TM2D3-206ENST00000559024 KCNA4P22459 653 aa16.56■□□□□ 0.24
TM2D3-206ENST00000559024 RNF39Q9H2S5 420 aa16.42■□□□□ 0.22
TM2D3-206ENST00000559024 CACNB1Q02641 598 aaPredicted RBP16.39■□□□□ 0.21
TM2D3-206ENST00000559024 DNAJC5BQ9UF47 199 aa16.35■□□□□ 0.21
TM2D3-206ENST00000559024 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.22■□□□□ 0.19
TM2D3-206ENST00000559024 CCDC180Q9P1Z9 1646 aa16.22■□□□□ 0.19
TM2D3-206ENST00000559024 C1QBPQ07021 282 aaKnown RBP16.16■□□□□ 0.18
TM2D3-206ENST00000559024 U3KPZ7 1027 aaPredicted RBP15.93■□□□□ 0.14
TM2D3-206ENST00000559024 SLC4A2P04920 1241 aa15.91■□□□□ 0.14
TM2D3-206ENST00000559024 PABPN1Q86U42 306 aaKnown RBP eCLIP15.71■□□□□ 0.11
TM2D3-206ENST00000559024 RB1CC1Q8TDY2 1594 aa15.68■□□□□ 0.1
TM2D3-206ENST00000559024 SPINK5Q9NQ38 1064 aaPredicted RBP15.66■□□□□ 0.1
TM2D3-206ENST00000559024 SLC4A1APQ9BWU0 796 aaKnown RBP15.63■□□□□ 0.09
TM2D3-206ENST00000559024 CAPN15O75808 1086 aa15.59■□□□□ 0.09
TM2D3-206ENST00000559024 UNC13AQ9UPW8 1703 aa15.52■□□□□ 0.08
TM2D3-206ENST00000559024 DCAF8L2P0C7V8 631 aa15.49■□□□□ 0.07
TM2D3-206ENST00000559024 DSG3P32926 999 aa15.46■□□□□ 0.07
TM2D3-206ENST00000559024 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.44■□□□□ 0.06
TM2D3-206ENST00000559024 HNRNPUL2Q1KMD3 747 aaKnown RBP15.44■□□□□ 0.06
TM2D3-206ENST00000559024 NACADO15069 1562 aa15.42■□□□□ 0.06
TM2D3-206ENST00000559024 TRHP20396 242 aaPredicted RBP15.41■□□□□ 0.06
TM2D3-206ENST00000559024 BICRAQ9NZM4 1560 aa15.39■□□□□ 0.05
TM2D3-206ENST00000559024 MYCNP04198 464 aaPredicted RBP15.38■□□□□ 0.05
TM2D3-206ENST00000559024 APLP2Q06481 763 aa15.38■□□□□ 0.05
TM2D3-206ENST00000559024 SAMD1Q6SPF0 538 aaPredicted RBP15.38■□□□□ 0.05
TM2D3-206ENST00000559024 FOXD4L1Q9NU39 408 aa15.34■□□□□ 0.05
TM2D3-206ENST00000559024 ZNF219Q9P2Y4 722 aaPredicted RBP15.31■□□□□ 0.04
TM2D3-206ENST00000559024 ABCB7O75027 752 aa15.28■□□□□ 0.04
TM2D3-206ENST00000559024 ZBTB22O15209 634 aa15.25■□□□□ 0.03
TM2D3-206ENST00000559024 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
TM2D3-206ENST00000559024 CECR2Q9BXF3 1484 aa15.17■□□□□ 0.02
TM2D3-206ENST00000559024 DNAJC5Q9H3Z4 198 aa15.16■□□□□ 0.02
TM2D3-206ENST00000559024 ATF5Q9Y2D1 282 aaPredicted RBP15.11■□□□□ 0.01
TM2D3-206ENST00000559024 POLA2Q14181 598 aa15.03■□□□□ -0
TM2D3-206ENST00000559024 EIF4G1Q04637 1599 aaKnown RBP14.98□□□□□ -0.01
TM2D3-206ENST00000559024 SCRIBQ14160 1630 aa14.95□□□□□ -0.02
TM2D3-206ENST00000559024 MYO15BQ96JP2 1530 aa14.95□□□□□ -0.02
TM2D3-206ENST00000559024 ATXN8OSP0DMR3 200 aa14.81□□□□□ -0.04
TM2D3-206ENST00000559024 SHROOM4Q9ULL8 1493 aa14.81□□□□□ -0.04
TM2D3-206ENST00000559024 ZCCHC6Q5VYS8 1495 aaKnown RBP14.76□□□□□ -0.05
TM2D3-206ENST00000559024 CSRNP3Q8WYN3 585 aa14.71□□□□□ -0.05
TM2D3-206ENST00000559024 RBM42Q9BTD8 480 aaKnown RBP14.67□□□□□ -0.06
TM2D3-206ENST00000559024 DCAF1Q9Y4B6 1507 aa14.65□□□□□ -0.06
TM2D3-206ENST00000559024 ZBTB12Q9Y330 459 aaPredicted RBP14.64□□□□□ -0.07
TM2D3-206ENST00000559024 EHMT2Q96KQ7 1210 aa14.62□□□□□ -0.07
TM2D3-206ENST00000559024 OSCARQ8IYS5 282 aa14.54□□□□□ -0.08
TM2D3-206ENST00000559024 CUX2O14529 1486 aa14.54□□□□□ -0.08
TM2D3-206ENST00000559024 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
TM2D3-206ENST00000559024 POTEHQ6S545 545 aa14.5□□□□□ -0.09
TM2D3-206ENST00000559024 TRIM41Q8WV44 630 aa14.45□□□□□ -0.1
TM2D3-206ENST00000559024 NESP48681 1621 aa14.42□□□□□ -0.1
TM2D3-206ENST00000559024 MKRN4PQ13434 485 aaPredicted RBP14.41□□□□□ -0.1
TM2D3-206ENST00000559024 AKT1S1Q96B36 256 aa14.41□□□□□ -0.1
TM2D3-206ENST00000559024 FBLN2P98095 1184 aa14.4□□□□□ -0.1
TM2D3-206ENST00000559024 CHRDL2Q6WN34 429 aa14.33□□□□□ -0.12
TM2D3-206ENST00000559024 REM2Q8IYK8 340 aaPredicted RBP14.31□□□□□ -0.12
TM2D3-206ENST00000559024 NCAPD3P42695 1498 aa14.27□□□□□ -0.12
TM2D3-206ENST00000559024 THOC2Q8NI27 1593 aaKnown RBP14.26□□□□□ -0.13
TM2D3-206ENST00000559024 SPDYE2BA6NHP3 402 aa14.25□□□□□ -0.13
TM2D3-206ENST00000559024 SPDYE6P0CI01 402 aa14.25□□□□□ -0.13
TM2D3-206ENST00000559024 SPDYE2Q495Y8 402 aa14.25□□□□□ -0.13
TM2D3-206ENST00000559024 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
TM2D3-206ENST00000559024 SMARCA2P51531 1590 aa14.22□□□□□ -0.13
TM2D3-206ENST00000559024 KIF21AQ7Z4S6 1674 aa14.18□□□□□ -0.14
TM2D3-206ENST00000559024 PITPNM1O00562 1244 aa14.16□□□□□ -0.14
TM2D3-206ENST00000559024 ZNF692Q9BU19 519 aaPredicted RBP14.14□□□□□ -0.15
TM2D3-206ENST00000559024 SMARCA4P51532 1647 aa14.12□□□□□ -0.15
TM2D3-206ENST00000559024 HMGXB3Q12766 1538 aa14.11□□□□□ -0.15
TM2D3-206ENST00000559024 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
TM2D3-206ENST00000559024 BAZ1BQ9UIG0 1483 aaKnown RBP14.06□□□□□ -0.16
TM2D3-206ENST00000559024 PIP4P2Q8N4L2 257 aa14.04□□□□□ -0.16
TM2D3-206ENST00000559024 LAMC3Q9Y6N6 1575 aa14.01□□□□□ -0.17
TM2D3-206ENST00000559024 FXR2P51116 673 aaKnown RBP eCLIP13.98□□□□□ -0.17
TM2D3-206ENST00000559024 BAZ1AQ9NRL2 1556 aaPredicted RBP13.97□□□□□ -0.17
TM2D3-206ENST00000559024 CLEC11AQ9Y240 323 aa13.97□□□□□ -0.17
TM2D3-206ENST00000559024 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
TM2D3-206ENST00000559024 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms