RNA–Protein interactions for RNA: ENST00000541898.5

ARMC6-217, Transcript of armadillo repeat containing 6, humanhuman

TSL 2

Gene ARMC6, Length 1,198 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARMC6-217ENST00000541898 NISCHQ9Y2I1 1504 aa48.06■■■■■ 5.28
ARMC6-217ENST00000541898 CCDC180Q9P1Z9 1646 aa42.38■■■■■ 4.38
ARMC6-217ENST00000541898 ABCC9O60706 1549 aa41.08■■■■■ 4.17
ARMC6-217ENST00000541898 ZCCHC6Q5VYS8 1495 aaKnown RBP40.15■■■■■ 4.02
ARMC6-217ENST00000541898 DCAF8L2P0C7V8 631 aa39.93■■■■□ 3.98
ARMC6-217ENST00000541898 NACADO15069 1562 aa39.73■■■■□ 3.95
ARMC6-217ENST00000541898 DCAF1Q9Y4B6 1507 aa39.72■■■■□ 3.95
ARMC6-217ENST00000541898 MYO15BQ96JP2 1530 aa39.66■■■■□ 3.94
ARMC6-217ENST00000541898 RB1CC1Q8TDY2 1594 aa39.63■■■■□ 3.94
ARMC6-217ENST00000541898 UNC13AQ9UPW8 1703 aa38.87■■■■□ 3.81
ARMC6-217ENST00000541898 SCRIBQ14160 1630 aa38.82■■■■□ 3.81
ARMC6-217ENST00000541898 BICRAQ9NZM4 1560 aa38.58■■■■□ 3.77
ARMC6-217ENST00000541898 PABPN1Q86U42 306 aaKnown RBP eCLIP38.54■■■■□ 3.76
ARMC6-217ENST00000541898 SHROOM4Q9ULL8 1493 aa38.38■■■■□ 3.73
ARMC6-217ENST00000541898 CECR2Q9BXF3 1484 aa37.48■■■■□ 3.59
ARMC6-217ENST00000541898 EIF4G1Q04637 1599 aaKnown RBP37.43■■■■□ 3.58
ARMC6-217ENST00000541898 DNAJC5BQ9UF47 199 aa37.37■■■■□ 3.57
ARMC6-217ENST00000541898 CC2D2AQ9P2K1 1620 aa37.17■■■■□ 3.54
ARMC6-217ENST00000541898 SMARCA4P51532 1647 aa37.16■■■■□ 3.54
ARMC6-217ENST00000541898 BAZ1AQ9NRL2 1556 aaPredicted RBP37.14■■■■□ 3.54
ARMC6-217ENST00000541898 MROH2BQ7Z745 1585 aa37.12■■■■□ 3.53
ARMC6-217ENST00000541898 RSF1Q96T23 1441 aaPredicted RBP36.87■■■■□ 3.49
ARMC6-217ENST00000541898 ATAD2BQ9ULI0 1458 aa36.85■■■■□ 3.49
ARMC6-217ENST00000541898 PEG3Q9GZU2 1588 aa36.77■■■■□ 3.48
ARMC6-217ENST00000541898 WIZO95785 1651 aa36.74■■■■□ 3.47
ARMC6-217ENST00000541898 SMARCA2P51531 1590 aa36.73■■■■□ 3.47
ARMC6-217ENST00000541898 NCAPD3P42695 1498 aa36.71■■■■□ 3.47
ARMC6-217ENST00000541898 HMGXB3Q12766 1538 aa36.54■■■■□ 3.44
ARMC6-217ENST00000541898 BAZ1BQ9UIG0 1483 aaKnown RBP36.5■■■■□ 3.43
ARMC6-217ENST00000541898 SUPT5HO00267 1087 aaKnown RBP36.34■■■■□ 3.41
ARMC6-217ENST00000541898 TOP2AP11388 1531 aaKnown RBP36.29■■■■□ 3.4
ARMC6-217ENST00000541898 CCDC88BA6NC98 1476 aa35.93■■■■□ 3.34
ARMC6-217ENST00000541898 NESP48681 1621 aa35.77■■■■□ 3.32
ARMC6-217ENST00000541898 CADPSQ9ULU8 1353 aa35.67■■■■□ 3.3
ARMC6-217ENST00000541898 LAMC3Q9Y6N6 1575 aa35.59■■■■□ 3.29
ARMC6-217ENST00000541898 CFTRP13569 1480 aa35.59■■■■□ 3.29
ARMC6-217ENST00000541898 PDS5BQ9NTI5 1447 aa35.32■■■■□ 3.25
ARMC6-217ENST00000541898 PRDM2Q13029 1718 aa35.29■■■■□ 3.24
ARMC6-217ENST00000541898 KIF21AQ7Z4S6 1674 aa35.29■■■■□ 3.24
ARMC6-217ENST00000541898 FANCD2Q9BXW9 1451 aa35.26■■■■□ 3.23
ARMC6-217ENST00000541898 ERCC6Q03468 1493 aa35.25■■■■□ 3.23
ARMC6-217ENST00000541898 CEP164Q9UPV0 1460 aa35.12■■■■□ 3.21
ARMC6-217ENST00000541898 THOC2Q8NI27 1593 aaKnown RBP35.04■■■■□ 3.2
ARMC6-217ENST00000541898 MRC2Q9UBG0 1479 aa34.98■■■■□ 3.19
ARMC6-217ENST00000541898 URB2Q14146 1524 aaKnown RBP34.95■■■■□ 3.19
ARMC6-217ENST00000541898 WDR62O43379 1518 aa34.86■■■■□ 3.17
ARMC6-217ENST00000541898 ABCC8Q09428 1581 aa34.81■■■■□ 3.16
ARMC6-217ENST00000541898 TOPBP1Q92547 1522 aa34.78■■■■□ 3.16
ARMC6-217ENST00000541898 CUX1P39880 1505 aa34.77■■■■□ 3.16
ARMC6-217ENST00000541898 DNMBPQ6XZF7 1577 aa34.74■■■■□ 3.15
ARMC6-217ENST00000541898 CUX2O14529 1486 aa34.68■■■■□ 3.14
ARMC6-217ENST00000541898 WRNQ14191 1432 aaPredicted RBP eCLIP34.67■■■■□ 3.14
ARMC6-217ENST00000541898 SYNJ1O43426 1573 aa34.64■■■■□ 3.14
ARMC6-217ENST00000541898 TOP2BQ02880 1626 aa34.55■■■■□ 3.12
ARMC6-217ENST00000541898 BIVM-ERCC5R4GMW8 1640 aa34.54■■■■□ 3.12
ARMC6-217ENST00000541898 POLA1P09884 1462 aaPredicted RBP34.52■■■■□ 3.12
ARMC6-217ENST00000541898 FGD5Q6ZNL6 1462 aa34.52■■■■□ 3.12
ARMC6-217ENST00000541898 RAD54L2Q9Y4B4 1467 aa34.43■■■■□ 3.1
ARMC6-217ENST00000541898 TARBP1Q13395 1621 aaKnown RBP34.38■■■■□ 3.09
ARMC6-217ENST00000541898 SOGA1O94964 1423 aa34.38■■■■□ 3.09
ARMC6-217ENST00000541898 IFT140Q96RY7 1462 aa34.36■■■■□ 3.09
ARMC6-217ENST00000541898 ZNF608Q9ULD9 1512 aaPredicted RBP34.29■■■■□ 3.08
ARMC6-217ENST00000541898 CHIC1Q5VXU3 224 aa34.28■■■■□ 3.08
ARMC6-217ENST00000541898 TRIM41Q8WV44 630 aa34.22■■■■□ 3.07
ARMC6-217ENST00000541898 WDR97A6NE52 1622 aa34.21■■■■□ 3.07
ARMC6-217ENST00000541898 ABCA10Q8WWZ4 1543 aa34.19■■■■□ 3.06
ARMC6-217ENST00000541898 TDRD9Q8NDG6 1382 aaKnown RBP34.16■■■■□ 3.06
ARMC6-217ENST00000541898 AQRO60306 1485 aaKnown RBP eCLIP34.15■■■■□ 3.064e-6■■■■□ 23.2
ARMC6-217ENST00000541898 EIF4G3O43432 1585 aaKnown RBP34.1■■■■□ 3.05
ARMC6-217ENST00000541898 ABCA5Q8WWZ7 1642 aa34.02■■■■□ 3.04
ARMC6-217ENST00000541898 GAPVD1Q14C86 1478 aa33.97■■■■□ 3.03
ARMC6-217ENST00000541898 RUSC2Q8N2Y8 1516 aa33.93■■■■□ 3.02
ARMC6-217ENST00000541898 GRIN2BQ13224 1484 aa33.87■■■■□ 3.01
ARMC6-217ENST00000541898 KIF27Q86VH2 1401 aa33.87■■■■□ 3.01
ARMC6-217ENST00000541898 PBRM1Q86U86 1689 aa33.87■■■■□ 3.01
ARMC6-217ENST00000541898 SNAPC4Q5SXM2 1469 aa33.8■■■■□ 3
ARMC6-217ENST00000541898 IGF1RP08069 1367 aa33.77■■■■□ 3
ARMC6-217ENST00000541898 ERICH3Q5RHP9 1530 aa33.75■■■□□ 2.99
ARMC6-217ENST00000541898 MAGI1Q96QZ7 1491 aaPredicted RBP33.7■■■□□ 2.99
ARMC6-217ENST00000541898 ADAMTS12P58397 1594 aa33.64■■■□□ 2.98
ARMC6-217ENST00000541898 FAM9AQ8IZU1 332 aaPredicted RBP33.6■■■□□ 2.97
ARMC6-217ENST00000541898 SYNJ2O15056 1496 aa33.59■■■□□ 2.97
ARMC6-217ENST00000541898 FHAD1B1AJZ9 1412 aa33.58■■■□□ 2.97
ARMC6-217ENST00000541898 CHD1O14646 1710 aa33.58■■■□□ 2.97
ARMC6-217ENST00000541898 FBLN2P98095 1184 aa33.55■■■□□ 2.96
ARMC6-217ENST00000541898 EEA1Q15075 1411 aa33.53■■■□□ 2.96
ARMC6-217ENST00000541898 CARMIL1Q5VZK9 1371 aa33.53■■■□□ 2.96
ARMC6-217ENST00000541898 CUL7Q14999 1698 aa33.52■■■□□ 2.96
ARMC6-217ENST00000541898 CHMP7Q8WUX9 453 aaPredicted RBP33.52■■■□□ 2.96
ARMC6-217ENST00000541898 CSRNP3Q8WYN3 585 aa33.52■■■□□ 2.96
ARMC6-217ENST00000541898 GRIN2AQ12879 1464 aa33.46■■■□□ 2.95
ARMC6-217ENST00000541898 PRXQ9BXM0 1461 aa33.44■■■□□ 2.94
ARMC6-217ENST00000541898 OSCARQ8IYS5 282 aa33.37■■■□□ 2.93
ARMC6-217ENST00000541898 RAPGEF2Q9Y4G8 1499 aa33.37■■■□□ 2.93
ARMC6-217ENST00000541898 CEP170Q5SW79 1584 aa33.33■■■□□ 2.93
ARMC6-217ENST00000541898 NUP160Q12769 1436 aa33.31■■■□□ 2.92
ARMC6-217ENST00000541898 CLASP1Q7Z460 1538 aa33.23■■■□□ 2.91
ARMC6-217ENST00000541898 KIF21BO75037 1637 aa33.22■■■□□ 2.91
ARMC6-217ENST00000541898 EHMT2Q96KQ7 1210 aa33.16■■■□□ 2.9
ARMC6-217ENST00000541898 KIAA0586Q9BVV6 1533 aa33.09■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms