RNA–Protein interactions for RNA: ENST00000556230.1

RPS29-205, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best)

Gene RPS29, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-205ENST00000556230 NISCHQ9Y2I1 1504 aa18.95■□□□□ 0.62
RPS29-205ENST00000556230 AEBP2Q6ZN18 517 aaPredicted RBP17.46■□□□□ 0.39
RPS29-205ENST00000556230 CCDC180Q9P1Z9 1646 aa16.96■□□□□ 0.31
RPS29-205ENST00000556230 ABCC9O60706 1549 aa16.5■□□□□ 0.23
RPS29-205ENST00000556230 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
RPS29-205ENST00000556230 RB1CC1Q8TDY2 1594 aa15.94■□□□□ 0.14
RPS29-205ENST00000556230 NACADO15069 1562 aa15.89■□□□□ 0.13
RPS29-205ENST00000556230 ZCCHC6Q5VYS8 1495 aaKnown RBP15.8■□□□□ 0.12
RPS29-205ENST00000556230 MYO15BQ96JP2 1530 aa15.78■□□□□ 0.12
RPS29-205ENST00000556230 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
RPS29-205ENST00000556230 DCAF1Q9Y4B6 1507 aa15.71■□□□□ 0.11
RPS29-205ENST00000556230 UNC13AQ9UPW8 1703 aa15.62■□□□□ 0.09
RPS29-205ENST00000556230 SCRIBQ14160 1630 aa15.42■□□□□ 0.06
RPS29-205ENST00000556230 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
RPS29-205ENST00000556230 PABPN1Q86U42 306 aaKnown RBP eCLIP15.35■□□□□ 0.05
RPS29-205ENST00000556230 SHROOM4Q9ULL8 1493 aa15.31■□□□□ 0.04
RPS29-205ENST00000556230 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
RPS29-205ENST00000556230 EIF4G1Q04637 1599 aaKnown RBP15.02■□□□□ -0
RPS29-205ENST00000556230 SENP3Q9H4L4 574 aaPredicted RBP15.02■□□□□ -0
RPS29-205ENST00000556230 CC2D2AQ9P2K1 1620 aa14.97□□□□□ -0.01
RPS29-205ENST00000556230 POTEDQ86YR6 584 aa14.91□□□□□ -0.02
RPS29-205ENST00000556230 CECR2Q9BXF3 1484 aa14.84□□□□□ -0.03
RPS29-205ENST00000556230 SMARCA4P51532 1647 aa14.76□□□□□ -0.05
RPS29-205ENST00000556230 BAZ1AQ9NRL2 1556 aaPredicted RBP14.73□□□□□ -0.05
RPS29-205ENST00000556230 PHF23Q9BUL5 403 aaPredicted RBP14.7□□□□□ -0.06
RPS29-205ENST00000556230 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
RPS29-205ENST00000556230 NCAPD3P42695 1498 aa14.62□□□□□ -0.07
RPS29-205ENST00000556230 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
RPS29-205ENST00000556230 HMGXB3Q12766 1538 aa14.61□□□□□ -0.07
RPS29-205ENST00000556230 PEG3Q9GZU2 1588 aa14.6□□□□□ -0.07
RPS29-205ENST00000556230 MROH2BQ7Z745 1585 aa14.6□□□□□ -0.07
RPS29-205ENST00000556230 BAZ1BQ9UIG0 1483 aaKnown RBP14.53□□□□□ -0.08
RPS29-205ENST00000556230 WIZO95785 1651 aa14.47□□□□□ -0.09
RPS29-205ENST00000556230 RSF1Q96T23 1441 aaPredicted RBP14.4□□□□□ -0.1
RPS29-205ENST00000556230 TOP2AP11388 1531 aaKnown RBP14.32□□□□□ -0.12
RPS29-205ENST00000556230 LAMC3Q9Y6N6 1575 aa14.3□□□□□ -0.12
RPS29-205ENST00000556230 NESP48681 1621 aa14.26□□□□□ -0.13
RPS29-205ENST00000556230 ERCC6Q03468 1493 aa14.26□□□□□ -0.13
RPS29-205ENST00000556230 KIF21AQ7Z4S6 1674 aa14.19□□□□□ -0.14
RPS29-205ENST00000556230 CADPSQ9ULU8 1353 aa14.18□□□□□ -0.14
RPS29-205ENST00000556230 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
RPS29-205ENST00000556230 PRDM2Q13029 1718 aa14.15□□□□□ -0.14
RPS29-205ENST00000556230 THOC2Q8NI27 1593 aaKnown RBP14.13□□□□□ -0.15
RPS29-205ENST00000556230 CUX2O14529 1486 aa14.12□□□□□ -0.15
RPS29-205ENST00000556230 FOXD1Q16676 465 aa14.11□□□□□ -0.15
RPS29-205ENST00000556230 CFTRP13569 1480 aa14.11□□□□□ -0.15
RPS29-205ENST00000556230 CCDC88BA6NC98 1476 aa14.1□□□□□ -0.15
RPS29-205ENST00000556230 CEP164Q9UPV0 1460 aa14.06□□□□□ -0.16
RPS29-205ENST00000556230 FANCD2Q9BXW9 1451 aa14.05□□□□□ -0.16
RPS29-205ENST00000556230 MRC2Q9UBG0 1479 aa14.03□□□□□ -0.16
RPS29-205ENST00000556230 WDR62O43379 1518 aa14□□□□□ -0.17
RPS29-205ENST00000556230 SUPT5HO00267 1087 aaKnown RBP13.97□□□□□ -0.17
RPS29-205ENST00000556230 URB2Q14146 1524 aaKnown RBP13.9□□□□□ -0.19
RPS29-205ENST00000556230 DNMBPQ6XZF7 1577 aa13.84□□□□□ -0.19
RPS29-205ENST00000556230 ABCC8Q09428 1581 aa13.83□□□□□ -0.19
RPS29-205ENST00000556230 TOPBP1Q92547 1522 aa13.82□□□□□ -0.2
RPS29-205ENST00000556230 IFT140Q96RY7 1462 aa13.74□□□□□ -0.21
RPS29-205ENST00000556230 CUX1P39880 1505 aa13.7□□□□□ -0.22
RPS29-205ENST00000556230 POLA1P09884 1462 aaPredicted RBP13.7□□□□□ -0.22
RPS29-205ENST00000556230 TARBP1Q13395 1621 aaKnown RBP13.7□□□□□ -0.22
RPS29-205ENST00000556230 EIF4G3O43432 1585 aaKnown RBP13.67□□□□□ -0.22
RPS29-205ENST00000556230 FGD5Q6ZNL6 1462 aa13.67□□□□□ -0.22
RPS29-205ENST00000556230 ZNF608Q9ULD9 1512 aaPredicted RBP13.65□□□□□ -0.22
RPS29-205ENST00000556230 BIVM-ERCC5R4GMW8 1640 aa13.64□□□□□ -0.23
RPS29-205ENST00000556230 WDR97A6NE52 1622 aa13.64□□□□□ -0.23
RPS29-205ENST00000556230 DNAJC5Q9H3Z4 198 aa13.63□□□□□ -0.23
RPS29-205ENST00000556230 TOP2BQ02880 1626 aa13.62□□□□□ -0.23
RPS29-205ENST00000556230 SOGA1O94964 1423 aa13.61□□□□□ -0.23
RPS29-205ENST00000556230 RAD54L2Q9Y4B4 1467 aa13.61□□□□□ -0.23
RPS29-205ENST00000556230 SYNJ1O43426 1573 aa13.6□□□□□ -0.23
RPS29-205ENST00000556230 WRNQ14191 1432 aaPredicted RBP eCLIP13.6□□□□□ -0.23
RPS29-205ENST00000556230 MSH5O43196 834 aa13.56□□□□□ -0.24
RPS29-205ENST00000556230 AQRO60306 1485 aaKnown RBP eCLIP13.55□□□□□ -0.247e-11■■■■■ 26.9
RPS29-205ENST00000556230 PBRM1Q86U86 1689 aa13.55□□□□□ -0.24
RPS29-205ENST00000556230 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
RPS29-205ENST00000556230 CHD1O14646 1710 aa13.53□□□□□ -0.24
RPS29-205ENST00000556230 ABCA5Q8WWZ7 1642 aa13.53□□□□□ -0.24
RPS29-205ENST00000556230 TDRD9Q8NDG6 1382 aaKnown RBP13.52□□□□□ -0.25
RPS29-205ENST00000556230 GRIN2BQ13224 1484 aa13.49□□□□□ -0.25
RPS29-205ENST00000556230 GAPVD1Q14C86 1478 aa13.48□□□□□ -0.25
RPS29-205ENST00000556230 SNAPC4Q5SXM2 1469 aa13.48□□□□□ -0.25
RPS29-205ENST00000556230 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
RPS29-205ENST00000556230 OSCARQ8IYS5 282 aa13.46□□□□□ -0.25
RPS29-205ENST00000556230 SYNJ2O15056 1496 aa13.42□□□□□ -0.26
RPS29-205ENST00000556230 ADAMTS12P58397 1594 aa13.41□□□□□ -0.26
RPS29-205ENST00000556230 ERICH3Q5RHP9 1530 aa13.39□□□□□ -0.27
RPS29-205ENST00000556230 FBLN2P98095 1184 aa13.39□□□□□ -0.27
RPS29-205ENST00000556230 CHMP7Q8WUX9 453 aaPredicted RBP13.35□□□□□ -0.27
RPS29-205ENST00000556230 CLASP1Q7Z460 1538 aa13.34□□□□□ -0.27
RPS29-205ENST00000556230 RIMBP3CA6NJZ7 1639 aa13.33□□□□□ -0.28
RPS29-205ENST00000556230 RIMBP3BA6NNM3 1639 aa13.33□□□□□ -0.28
RPS29-205ENST00000556230 RIMBP3Q9UFD9 1639 aa13.33□□□□□ -0.28
RPS29-205ENST00000556230 FHAD1B1AJZ9 1412 aa13.32□□□□□ -0.28
RPS29-205ENST00000556230 KIF27Q86VH2 1401 aa13.32□□□□□ -0.28
RPS29-205ENST00000556230 CUL7Q14999 1698 aa13.32□□□□□ -0.28
RPS29-205ENST00000556230 GRIN2AQ12879 1464 aa13.32□□□□□ -0.28
RPS29-205ENST00000556230 ARHGEF11O15085 1522 aa13.31□□□□□ -0.28
RPS29-205ENST00000556230 CEP170Q5SW79 1584 aa13.27□□□□□ -0.29
RPS29-205ENST00000556230 NUP160Q12769 1436 aa13.25□□□□□ -0.29
RPS29-205ENST00000556230 IGF1RP08069 1367 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms