RNA–Protein interactions for RNA: ENST00000554075.1

RPS29-204, Transcript of ribosomal protein S29, humanhuman

TSL 1 (best)

Gene RPS29, Length 826 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS29-204ENST00000554075 NISCHQ9Y2I1 1504 aa19.78■□□□□ 0.76
RPS29-204ENST00000554075 AEBP2Q6ZN18 517 aaPredicted RBP18.63■□□□□ 0.57
RPS29-204ENST00000554075 CCDC180Q9P1Z9 1646 aa17.46■□□□□ 0.39
RPS29-204ENST00000554075 CHIC1Q5VXU3 224 aa17.44■□□□□ 0.38
RPS29-204ENST00000554075 ABCC9O60706 1549 aa16.72■□□□□ 0.27
RPS29-204ENST00000554075 ZCCHC6Q5VYS8 1495 aaKnown RBP16.55■□□□□ 0.24
RPS29-204ENST00000554075 DCAF8L2P0C7V8 631 aa16.46■□□□□ 0.23
RPS29-204ENST00000554075 DCAF1Q9Y4B6 1507 aa16.44■□□□□ 0.22
RPS29-204ENST00000554075 MYO15BQ96JP2 1530 aa16.4■□□□□ 0.22
RPS29-204ENST00000554075 NACADO15069 1562 aa16.38■□□□□ 0.21
RPS29-204ENST00000554075 RB1CC1Q8TDY2 1594 aa16.31■□□□□ 0.2
RPS29-204ENST00000554075 SENP3Q9H4L4 574 aaPredicted RBP16.08■□□□□ 0.16
RPS29-204ENST00000554075 SCRIBQ14160 1630 aa15.91■□□□□ 0.14
RPS29-204ENST00000554075 SHROOM4Q9ULL8 1493 aa15.8■□□□□ 0.12
RPS29-204ENST00000554075 UNC13AQ9UPW8 1703 aa15.74■□□□□ 0.11
RPS29-204ENST00000554075 PHF23Q9BUL5 403 aaPredicted RBP15.7■□□□□ 0.1
RPS29-204ENST00000554075 PABPN1Q86U42 306 aaKnown RBP eCLIP15.68■□□□□ 0.1
RPS29-204ENST00000554075 BICRAQ9NZM4 1560 aa15.66■□□□□ 0.1
RPS29-204ENST00000554075 POTEDQ86YR6 584 aa15.55■□□□□ 0.08
RPS29-204ENST00000554075 BAZ1AQ9NRL2 1556 aaPredicted RBP15.36■□□□□ 0.05
RPS29-204ENST00000554075 EIF4G1Q04637 1599 aaKnown RBP15.3■□□□□ 0.04
RPS29-204ENST00000554075 CECR2Q9BXF3 1484 aa15.29■□□□□ 0.04
RPS29-204ENST00000554075 SMARCA4P51532 1647 aa15.26■□□□□ 0.03
RPS29-204ENST00000554075 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
RPS29-204ENST00000554075 RSF1Q96T23 1441 aaPredicted RBP15.19■□□□□ 0.02
RPS29-204ENST00000554075 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
RPS29-204ENST00000554075 PEG3Q9GZU2 1588 aa15.13■□□□□ 0.01
RPS29-204ENST00000554075 CC2D2AQ9P2K1 1620 aa15.13■□□□□ 0.01
RPS29-204ENST00000554075 ATAD2BQ9ULI0 1458 aa15.12■□□□□ 0.01
RPS29-204ENST00000554075 SUPT5HO00267 1087 aaKnown RBP15.1■□□□□ 0.01
RPS29-204ENST00000554075 NCAPD3P42695 1498 aa15.08■□□□□ 0.01
RPS29-204ENST00000554075 BAZ1BQ9UIG0 1483 aaKnown RBP15.07■□□□□ 0
RPS29-204ENST00000554075 HMGXB3Q12766 1538 aa15.04■□□□□ -0
RPS29-204ENST00000554075 FOXD1Q16676 465 aa15.04■□□□□ -0
RPS29-204ENST00000554075 WIZO95785 1651 aa15.03■□□□□ -0
RPS29-204ENST00000554075 TOP2AP11388 1531 aaKnown RBP14.98□□□□□ -0.01
RPS29-204ENST00000554075 DNAJC5BQ9UF47 199 aa14.93□□□□□ -0.02
RPS29-204ENST00000554075 CCDC88BA6NC98 1476 aa14.77□□□□□ -0.04
RPS29-204ENST00000554075 CADPSQ9ULU8 1353 aa14.68□□□□□ -0.06
RPS29-204ENST00000554075 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
RPS29-204ENST00000554075 CFTRP13569 1480 aa14.64□□□□□ -0.07
RPS29-204ENST00000554075 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
RPS29-204ENST00000554075 NESP48681 1621 aa14.51□□□□□ -0.09
RPS29-204ENST00000554075 ERCC6Q03468 1493 aa14.5□□□□□ -0.09
RPS29-204ENST00000554075 FANCD2Q9BXW9 1451 aa14.5□□□□□ -0.09
RPS29-204ENST00000554075 PRDM2Q13029 1718 aa14.49□□□□□ -0.09
RPS29-204ENST00000554075 CEP164Q9UPV0 1460 aa14.47□□□□□ -0.09
RPS29-204ENST00000554075 MSH5O43196 834 aa14.46□□□□□ -0.09
RPS29-204ENST00000554075 ABCC8Q09428 1581 aa14.42□□□□□ -0.1
RPS29-204ENST00000554075 WRNQ14191 1432 aaPredicted RBP eCLIP14.37□□□□□ -0.11
RPS29-204ENST00000554075 MRC2Q9UBG0 1479 aa14.37□□□□□ -0.11
RPS29-204ENST00000554075 KIF21AQ7Z4S6 1674 aa14.34□□□□□ -0.11
RPS29-204ENST00000554075 TRIM41Q8WV44 630 aa14.32□□□□□ -0.12
RPS29-204ENST00000554075 DNMBPQ6XZF7 1577 aa14.3□□□□□ -0.12
RPS29-204ENST00000554075 WDR62O43379 1518 aa14.28□□□□□ -0.12
RPS29-204ENST00000554075 TOPBP1Q92547 1522 aa14.27□□□□□ -0.12
RPS29-204ENST00000554075 URB2Q14146 1524 aaKnown RBP14.26□□□□□ -0.13
RPS29-204ENST00000554075 TOP2BQ02880 1626 aa14.26□□□□□ -0.13
RPS29-204ENST00000554075 CUX1P39880 1505 aa14.25□□□□□ -0.13
RPS29-204ENST00000554075 THOC2Q8NI27 1593 aaKnown RBP14.24□□□□□ -0.13
RPS29-204ENST00000554075 BIVM-ERCC5R4GMW8 1640 aa14.23□□□□□ -0.13
RPS29-204ENST00000554075 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
RPS29-204ENST00000554075 CUX2O14529 1486 aa14.2□□□□□ -0.14
RPS29-204ENST00000554075 FGD5Q6ZNL6 1462 aa14.19□□□□□ -0.14
RPS29-204ENST00000554075 POLA1P09884 1462 aaPredicted RBP14.17□□□□□ -0.14
RPS29-204ENST00000554075 IFT140Q96RY7 1462 aa14.17□□□□□ -0.14
RPS29-204ENST00000554075 SOGA1O94964 1423 aa14.16□□□□□ -0.14
RPS29-204ENST00000554075 ABCA10Q8WWZ4 1543 aa14.1□□□□□ -0.15
RPS29-204ENST00000554075 EEA1Q15075 1411 aa14.09□□□□□ -0.15
RPS29-204ENST00000554075 KIF27Q86VH2 1401 aa14.09□□□□□ -0.15
RPS29-204ENST00000554075 WDR97A6NE52 1622 aa14.08□□□□□ -0.15
RPS29-204ENST00000554075 RAD54L2Q9Y4B4 1467 aa14.06□□□□□ -0.16
RPS29-204ENST00000554075 TARBP1Q13395 1621 aaKnown RBP14.04□□□□□ -0.16
RPS29-204ENST00000554075 GAPVD1Q14C86 1478 aa14□□□□□ -0.17
RPS29-204ENST00000554075 TDRD9Q8NDG6 1382 aaKnown RBP14□□□□□ -0.17
RPS29-204ENST00000554075 GRIN2BQ13224 1484 aa13.98□□□□□ -0.17
RPS29-204ENST00000554075 ABCA5Q8WWZ7 1642 aa13.96□□□□□ -0.17
RPS29-204ENST00000554075 ERICH3Q5RHP9 1530 aa13.95□□□□□ -0.18
RPS29-204ENST00000554075 ZNF608Q9ULD9 1512 aaPredicted RBP13.95□□□□□ -0.18
RPS29-204ENST00000554075 AQRO60306 1485 aaKnown RBP eCLIP13.95□□□□□ -0.187e-11■■■■■ 26.9
RPS29-204ENST00000554075 CSRNP3Q8WYN3 585 aa13.95□□□□□ -0.18
RPS29-204ENST00000554075 EIF4G3O43432 1585 aaKnown RBP13.95□□□□□ -0.18
RPS29-204ENST00000554075 FAM9AQ8IZU1 332 aaPredicted RBP13.92□□□□□ -0.18
RPS29-204ENST00000554075 MAGI1Q96QZ7 1491 aaPredicted RBP13.92□□□□□ -0.18
RPS29-204ENST00000554075 IGF1RP08069 1367 aa13.91□□□□□ -0.18
RPS29-204ENST00000554075 CUL7Q14999 1698 aa13.89□□□□□ -0.19
RPS29-204ENST00000554075 FHAD1B1AJZ9 1412 aa13.89□□□□□ -0.19
RPS29-204ENST00000554075 CARMIL1Q5VZK9 1371 aa13.87□□□□□ -0.19
RPS29-204ENST00000554075 RUSC2Q8N2Y8 1516 aa13.87□□□□□ -0.19
RPS29-204ENST00000554075 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
RPS29-204ENST00000554075 PBRM1Q86U86 1689 aa13.87□□□□□ -0.19
RPS29-204ENST00000554075 SNAPC4Q5SXM2 1469 aa13.87□□□□□ -0.19
RPS29-204ENST00000554075 CHMP7Q8WUX9 453 aaPredicted RBP13.85□□□□□ -0.19
RPS29-204ENST00000554075 SYNJ2O15056 1496 aa13.84□□□□□ -0.19
RPS29-204ENST00000554075 RAPGEF2Q9Y4G8 1499 aa13.84□□□□□ -0.19
RPS29-204ENST00000554075 PRXQ9BXM0 1461 aa13.83□□□□□ -0.2
RPS29-204ENST00000554075 ADAMTS12P58397 1594 aa13.82□□□□□ -0.2
RPS29-204ENST00000554075 FBLN2P98095 1184 aa13.81□□□□□ -0.2
RPS29-204ENST00000554075 KIF21BO75037 1637 aa13.81□□□□□ -0.2
RPS29-204ENST00000554075 GOLGA3Q08378 1498 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms