RNA–Protein interactions for RNA: ENST00000565092.6

CLCN7-209, Transcript of chloride voltage-gated channel 7, humanhuman

TSL 2

Gene CLCN7, Length 2,740 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN7-209ENST00000565092 NISCHQ9Y2I1 1504 aa34.26■■■■□ 3.08
CLCN7-209ENST00000565092 SHROOM4Q9ULL8 1493 aa29.4■■■□□ 2.3
CLCN7-209ENST00000565092 CCDC180Q9P1Z9 1646 aa29.01■■■□□ 2.23
CLCN7-209ENST00000565092 ZCCHC6Q5VYS8 1495 aaKnown RBP28.93■■■□□ 2.22
CLCN7-209ENST00000565092 SUPT5HO00267 1087 aaKnown RBP28.83■■■□□ 2.21
CLCN7-209ENST00000565092 DCAF8L2P0C7V8 631 aa28.77■■■□□ 2.2
CLCN7-209ENST00000565092 DCAF1Q9Y4B6 1507 aa28■■■□□ 2.07
CLCN7-209ENST00000565092 CHIC1Q5VXU3 224 aa27.88■■■□□ 2.05
CLCN7-209ENST00000565092 MYO15BQ96JP2 1530 aa27.7■■■□□ 2.02
CLCN7-209ENST00000565092 SCRIBQ14160 1630 aa27.37■■□□□ 1.97
CLCN7-209ENST00000565092 ABCC9O60706 1549 aa27.25■■□□□ 1.95
CLCN7-209ENST00000565092 LOC105371045A0A1W2PR82 267 aa27.15■■□□□ 1.94
CLCN7-209ENST00000565092 RSF1Q96T23 1441 aaPredicted RBP27.14■■□□□ 1.94
CLCN7-209ENST00000565092 PCGF6Q9BYE7 350 aa27.03■■□□□ 1.92
CLCN7-209ENST00000565092 NACADO15069 1562 aa26.92■■□□□ 1.9
CLCN7-209ENST00000565092 HRCP23327 699 aa26.86■■□□□ 1.89
CLCN7-209ENST00000565092 CECR2Q9BXF3 1484 aa26.82■■□□□ 1.88
CLCN7-209ENST00000565092 RB1CC1Q8TDY2 1594 aa26.81■■□□□ 1.88
CLCN7-209ENST00000565092 TRIM41Q8WV44 630 aa26.8■■□□□ 1.88
CLCN7-209ENST00000565092 MROH2BQ7Z745 1585 aa26.68■■□□□ 1.86
CLCN7-209ENST00000565092 FAM9AQ8IZU1 332 aaPredicted RBP26.67■■□□□ 1.86
CLCN7-209ENST00000565092 EHMT2Q96KQ7 1210 aa26.53■■□□□ 1.84
CLCN7-209ENST00000565092 WIZO95785 1651 aa26.51■■□□□ 1.83
CLCN7-209ENST00000565092 PPARGC1BQ86YN6 1023 aaKnown RBP26.44■■□□□ 1.82
CLCN7-209ENST00000565092 TRIM26Q12899 539 aaPredicted RBP26.44■■□□□ 1.82
CLCN7-209ENST00000565092 BAZ1AQ9NRL2 1556 aaPredicted RBP26.3■■□□□ 1.8
CLCN7-209ENST00000565092 PABPN1Q86U42 306 aaKnown RBP eCLIP26.12■■□□□ 1.775e-7■□□□□ 8.6
CLCN7-209ENST00000565092 SMARCA4P51532 1647 aa26.08■■□□□ 1.76
CLCN7-209ENST00000565092 UNC13AQ9UPW8 1703 aa26.06■■□□□ 1.76
CLCN7-209ENST00000565092 TOP2AP11388 1531 aaKnown RBP26.03■■□□□ 1.76
CLCN7-209ENST00000565092 CCDC88BA6NC98 1476 aa26.02■■□□□ 1.76
CLCN7-209ENST00000565092 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
CLCN7-209ENST00000565092 ABCC8Q09428 1581 aa25.95■■□□□ 1.74
CLCN7-209ENST00000565092 SMARCA2P51531 1590 aa25.91■■□□□ 1.74
CLCN7-209ENST00000565092 BICRAQ9NZM4 1560 aa25.81■■□□□ 1.72
CLCN7-209ENST00000565092 ZEB1P37275 1124 aaPredicted RBP25.76■■□□□ 1.71
CLCN7-209ENST00000565092 SOGA1O94964 1423 aa25.73■■□□□ 1.71
CLCN7-209ENST00000565092 TTBK1Q5TCY1 1321 aaPredicted RBP25.63■■□□□ 1.69
CLCN7-209ENST00000565092 RUSC2Q8N2Y8 1516 aa25.6■■□□□ 1.69
CLCN7-209ENST00000565092 CSRNP3Q8WYN3 585 aa25.6■■□□□ 1.69
CLCN7-209ENST00000565092 UBTFP17480 764 aaKnown RBP25.58■■□□□ 1.69
CLCN7-209ENST00000565092 CEP162Q5TB80 1403 aa25.54■■□□□ 1.68
CLCN7-209ENST00000565092 WRNQ14191 1432 aaPredicted RBP eCLIP25.52■■□□□ 1.682e-6■■■■□ 22.3
CLCN7-209ENST00000565092 PEG3Q9GZU2 1588 aa25.51■■□□□ 1.67
CLCN7-209ENST00000565092 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.5■■□□□ 1.67
CLCN7-209ENST00000565092 ATAD2BQ9ULI0 1458 aa25.49■■□□□ 1.67
CLCN7-209ENST00000565092 TNIKQ9UKE5 1360 aa25.47■■□□□ 1.67
CLCN7-209ENST00000565092 EEA1Q15075 1411 aa25.45■■□□□ 1.67
CLCN7-209ENST00000565092 BAZ1BQ9UIG0 1483 aaKnown RBP25.43■■□□□ 1.66
CLCN7-209ENST00000565092 CCER1Q8TC90 406 aaPredicted RBP25.4■■□□□ 1.66
CLCN7-209ENST00000565092 SYNJ1O43426 1573 aa25.34■■□□□ 1.65
CLCN7-209ENST00000565092 GOLGA3Q08378 1498 aa25.33■■□□□ 1.64
CLCN7-209ENST00000565092 RANGAP1P46060 587 aaPredicted RBP25.2■■□□□ 1.62
CLCN7-209ENST00000565092 CEP164Q9UPV0 1460 aa25.19■■□□□ 1.62
CLCN7-209ENST00000565092 CLIP1P30622 1438 aa25.09■■□□□ 1.61
CLCN7-209ENST00000565092 RAPGEF2Q9Y4G8 1499 aa25.08■■□□□ 1.61
CLCN7-209ENST00000565092 KIF21BO75037 1637 aa25.07■■□□□ 1.6
CLCN7-209ENST00000565092 TOP2BQ02880 1626 aa24.99■■□□□ 1.59
CLCN7-209ENST00000565092 NCAPD3P42695 1498 aa24.98■■□□□ 1.59
CLCN7-209ENST00000565092 HNRNPUL2Q1KMD3 747 aaKnown RBP24.98■■□□□ 1.59
CLCN7-209ENST00000565092 APLP2Q06481 763 aa24.96■■□□□ 1.59
CLCN7-209ENST00000565092 VPS8Q8N3P4 1428 aa24.93■■□□□ 1.58
CLCN7-209ENST00000565092 HMGXB3Q12766 1538 aa24.9■■□□□ 1.58
CLCN7-209ENST00000565092 BIVM-ERCC5R4GMW8 1640 aa24.84■■□□□ 1.57
CLCN7-209ENST00000565092 DIEXFQ68CQ4 756 aaKnown RBP24.83■■□□□ 1.56
CLCN7-209ENST00000565092 CUX1P39880 1505 aa24.82■■□□□ 1.56
CLCN7-209ENST00000565092 PRXQ9BXM0 1461 aa24.78■■□□□ 1.56
CLCN7-209ENST00000565092 CFTRP13569 1480 aa24.77■■□□□ 1.56
CLCN7-209ENST00000565092 KIF27Q86VH2 1401 aa24.73■■□□□ 1.55
CLCN7-209ENST00000565092 SCAF1Q9H7N4 1312 aaKnown RBP24.73■■□□□ 1.55
CLCN7-209ENST00000565092 ERICH3Q5RHP9 1530 aa24.69■■□□□ 1.54
CLCN7-209ENST00000565092 KANK4Q5T7N3 995 aaPredicted RBP24.64■■□□□ 1.53
CLCN7-209ENST00000565092 PELP1Q8IZL8 1130 aaKnown RBP24.64■■□□□ 1.53
CLCN7-209ENST00000565092 ARAP1Q96P48 1450 aa24.64■■□□□ 1.53
CLCN7-209ENST00000565092 ZNF316A6NFI3 1004 aaPredicted RBP24.63■■□□□ 1.53
CLCN7-209ENST00000565092 CADPSQ9ULU8 1353 aa24.57■■□□□ 1.52
CLCN7-209ENST00000565092 NEUROD1Q13562 356 aa24.54■■□□□ 1.52
CLCN7-209ENST00000565092 CUX2O14529 1486 aa24.53■■□□□ 1.52
CLCN7-209ENST00000565092 ACIN1Q9UKV3 1341 aaKnown RBP24.51■■□□□ 1.51
CLCN7-209ENST00000565092 IGF1RP08069 1367 aa24.5■■□□□ 1.51
CLCN7-209ENST00000565092 ARHGAP35Q9NRY4 1499 aa24.47■■□□□ 1.51
CLCN7-209ENST00000565092 FGD5Q6ZNL6 1462 aa24.42■■□□□ 1.5
CLCN7-209ENST00000565092 ITGAEP38570 1179 aa24.4■■□□□ 1.5
CLCN7-209ENST00000565092 CARMIL1Q5VZK9 1371 aa24.4■■□□□ 1.5
CLCN7-209ENST00000565092 CC2D2AQ9P2K1 1620 aa24.4■■□□□ 1.5
CLCN7-209ENST00000565092 CENPBP07199 599 aaPredicted RBP24.39■■□□□ 1.5
CLCN7-209ENST00000565092 PRDM2Q13029 1718 aa24.36■■□□□ 1.49
CLCN7-209ENST00000565092 DHX57Q6P158 1386 aaKnown RBP24.34■■□□□ 1.49
CLCN7-209ENST00000565092 YTHDC1Q96MU7 727 aaKnown RBP24.33■■□□□ 1.48
CLCN7-209ENST00000565092 P3H3Q8IVL6 736 aa24.32■■□□□ 1.48
CLCN7-209ENST00000565092 MIER1Q8N108 512 aa24.32■■□□□ 1.48
CLCN7-209ENST00000565092 FANCD2Q9BXW9 1451 aa24.31■■□□□ 1.48
CLCN7-209ENST00000565092 RRBP1Q9P2E9 1410 aaKnown RBP24.31■■□□□ 1.48
CLCN7-209ENST00000565092 CCNB3Q8WWL7 1395 aa24.3■■□□□ 1.48
CLCN7-209ENST00000565092 GTF3C3Q9Y5Q9 886 aa24.28■■□□□ 1.48
CLCN7-209ENST00000565092 ATP1B4Q9UN42 357 aaPredicted RBP24.26■■□□□ 1.47
CLCN7-209ENST00000565092 RAD54L2Q9Y4B4 1467 aa24.24■■□□□ 1.47
CLCN7-209ENST00000565092 CLSPNQ9HAW4 1339 aa24.23■■□□□ 1.47
CLCN7-209ENST00000565092 NESP48681 1621 aa24.22■■□□□ 1.47
CLCN7-209ENST00000565092 POLA1P09884 1462 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms