RNA–Protein interactions for RNA: ENST00000560910.5

TM2D3-213, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 554 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-213ENST00000560910 NISCHQ9Y2I1 1504 aa41.68■■■■■ 4.26
TM2D3-213ENST00000560910 CCDC180Q9P1Z9 1646 aa37.16■■■■□ 3.54
TM2D3-213ENST00000560910 ABCC9O60706 1549 aa36.8■■■■□ 3.48
TM2D3-213ENST00000560910 RB1CC1Q8TDY2 1594 aa35.18■■■■□ 3.22
TM2D3-213ENST00000560910 NACADO15069 1562 aa35.05■■■■□ 3.2
TM2D3-213ENST00000560910 DCAF8L2P0C7V8 631 aa34.98■■■■□ 3.19
TM2D3-213ENST00000560910 MYO15BQ96JP2 1530 aa34.74■■■■□ 3.15
TM2D3-213ENST00000560910 ZCCHC6Q5VYS8 1495 aaKnown RBP34.65■■■■□ 3.14
TM2D3-213ENST00000560910 DCAF1Q9Y4B6 1507 aa34.45■■■■□ 3.11
TM2D3-213ENST00000560910 PABPN1Q86U42 306 aaKnown RBP eCLIP34.35■■■■□ 3.09
TM2D3-213ENST00000560910 UNC13AQ9UPW8 1703 aa34.32■■■■□ 3.08
TM2D3-213ENST00000560910 BICRAQ9NZM4 1560 aa34.15■■■■□ 3.06
TM2D3-213ENST00000560910 DNAJC5BQ9UF47 199 aa34.14■■■■□ 3.06
TM2D3-213ENST00000560910 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
TM2D3-213ENST00000560910 SHROOM4Q9ULL8 1493 aa33.76■■■■□ 3
TM2D3-213ENST00000560910 EIF4G1Q04637 1599 aaKnown RBP33.29■■■□□ 2.92
TM2D3-213ENST00000560910 CC2D2AQ9P2K1 1620 aa33.23■■■□□ 2.91
TM2D3-213ENST00000560910 CECR2Q9BXF3 1484 aa33.1■■■□□ 2.89
TM2D3-213ENST00000560910 SMARCA4P51532 1647 aa32.4■■■□□ 2.78
TM2D3-213ENST00000560910 NCAPD3P42695 1498 aa32.38■■■□□ 2.77
TM2D3-213ENST00000560910 ATAD2BQ9ULI0 1458 aa32.35■■■□□ 2.77
TM2D3-213ENST00000560910 BAZ1AQ9NRL2 1556 aaPredicted RBP32.32■■■□□ 2.76
TM2D3-213ENST00000560910 SMARCA2P51531 1590 aa32.27■■■□□ 2.76
TM2D3-213ENST00000560910 HMGXB3Q12766 1538 aa32.17■■■□□ 2.74
TM2D3-213ENST00000560910 MROH2BQ7Z745 1585 aa32.13■■■□□ 2.73
TM2D3-213ENST00000560910 PEG3Q9GZU2 1588 aa32.09■■■□□ 2.73
TM2D3-213ENST00000560910 BAZ1BQ9UIG0 1483 aaKnown RBP32.06■■■□□ 2.72
TM2D3-213ENST00000560910 ERCC6Q03468 1493 aa31.74■■■□□ 2.67
TM2D3-213ENST00000560910 NESP48681 1621 aa31.74■■■□□ 2.67
TM2D3-213ENST00000560910 WIZO95785 1651 aa31.73■■■□□ 2.67
TM2D3-213ENST00000560910 RSF1Q96T23 1441 aaPredicted RBP31.64■■■□□ 2.66
TM2D3-213ENST00000560910 LAMC3Q9Y6N6 1575 aa31.56■■■□□ 2.64
TM2D3-213ENST00000560910 CUX2O14529 1486 aa31.52■■■□□ 2.64
TM2D3-213ENST00000560910 CADPSQ9ULU8 1353 aa31.43■■■□□ 2.62
TM2D3-213ENST00000560910 TOP2AP11388 1531 aaKnown RBP31.39■■■□□ 2.62
TM2D3-213ENST00000560910 PDS5BQ9NTI5 1447 aa31.39■■■□□ 2.62
TM2D3-213ENST00000560910 THOC2Q8NI27 1593 aaKnown RBP31.3■■■□□ 2.6
TM2D3-213ENST00000560910 KIF21AQ7Z4S6 1674 aa31.28■■■□□ 2.6
TM2D3-213ENST00000560910 CFTRP13569 1480 aa31.15■■■□□ 2.58
TM2D3-213ENST00000560910 MRC2Q9UBG0 1479 aa31.09■■■□□ 2.57
TM2D3-213ENST00000560910 FANCD2Q9BXW9 1451 aa31.07■■■□□ 2.56
TM2D3-213ENST00000560910 CEP164Q9UPV0 1460 aa31.06■■■□□ 2.56
TM2D3-213ENST00000560910 CCDC88BA6NC98 1476 aa31.04■■■□□ 2.56
TM2D3-213ENST00000560910 DNAJC5Q9H3Z4 198 aa31■■■□□ 2.55
TM2D3-213ENST00000560910 WDR62O43379 1518 aa30.99■■■□□ 2.55
TM2D3-213ENST00000560910 URB2Q14146 1524 aaKnown RBP30.79■■■□□ 2.52
TM2D3-213ENST00000560910 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
TM2D3-213ENST00000560910 SUPT5HO00267 1087 aaKnown RBP30.56■■■□□ 2.48
TM2D3-213ENST00000560910 TOPBP1Q92547 1522 aa30.52■■■□□ 2.48
TM2D3-213ENST00000560910 ABCC8Q09428 1581 aa30.46■■■□□ 2.47
TM2D3-213ENST00000560910 DNMBPQ6XZF7 1577 aa30.44■■■□□ 2.46
TM2D3-213ENST00000560910 IFT140Q96RY7 1462 aa30.43■■■□□ 2.46
TM2D3-213ENST00000560910 ZNF608Q9ULD9 1512 aaPredicted RBP30.34■■■□□ 2.45
TM2D3-213ENST00000560910 POLA1P09884 1462 aaPredicted RBP30.25■■■□□ 2.43
TM2D3-213ENST00000560910 TARBP1Q13395 1621 aaKnown RBP30.2■■■□□ 2.43
TM2D3-213ENST00000560910 CUX1P39880 1505 aa30.17■■■□□ 2.42
TM2D3-213ENST00000560910 EIF4G3O43432 1585 aaKnown RBP30.16■■■□□ 2.42
TM2D3-213ENST00000560910 OSCARQ8IYS5 282 aa30.15■■■□□ 2.42
TM2D3-213ENST00000560910 RAD54L2Q9Y4B4 1467 aa30.13■■■□□ 2.41
TM2D3-213ENST00000560910 SOGA1O94964 1423 aa30.12■■■□□ 2.41
TM2D3-213ENST00000560910 AQRO60306 1485 aaKnown RBP eCLIP30.12■■■□□ 2.412e-6■■■■■ 26.9
TM2D3-213ENST00000560910 FGD5Q6ZNL6 1462 aa30.12■■■□□ 2.41
TM2D3-213ENST00000560910 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.39
TM2D3-213ENST00000560910 WDR97A6NE52 1622 aa29.92■■■□□ 2.38
TM2D3-213ENST00000560910 TRIM41Q8WV44 630 aa29.84■■■□□ 2.37
TM2D3-213ENST00000560910 SNAPC4Q5SXM2 1469 aa29.84■■■□□ 2.37
TM2D3-213ENST00000560910 WRNQ14191 1432 aaPredicted RBP eCLIP29.83■■■□□ 2.37
TM2D3-213ENST00000560910 FBLN2P98095 1184 aa29.83■■■□□ 2.37
TM2D3-213ENST00000560910 CHD1O14646 1710 aa29.81■■■□□ 2.36
TM2D3-213ENST00000560910 ABCA10Q8WWZ4 1543 aa29.81■■■□□ 2.36
TM2D3-213ENST00000560910 GRIN2BQ13224 1484 aa29.8■■■□□ 2.36
TM2D3-213ENST00000560910 TOP2BQ02880 1626 aa29.78■■■□□ 2.36
TM2D3-213ENST00000560910 SYNJ1O43426 1573 aa29.77■■■□□ 2.36
TM2D3-213ENST00000560910 MAGI1Q96QZ7 1491 aaPredicted RBP29.76■■■□□ 2.35
TM2D3-213ENST00000560910 GAPVD1Q14C86 1478 aa29.75■■■□□ 2.35
TM2D3-213ENST00000560910 BIVM-ERCC5R4GMW8 1640 aa29.75■■■□□ 2.35
TM2D3-213ENST00000560910 RIMBP3CA6NJZ7 1639 aa29.7■■■□□ 2.34
TM2D3-213ENST00000560910 RIMBP3BA6NNM3 1639 aa29.7■■■□□ 2.34
TM2D3-213ENST00000560910 ABCA5Q8WWZ7 1642 aa29.7■■■□□ 2.34
TM2D3-213ENST00000560910 RIMBP3Q9UFD9 1639 aa29.7■■■□□ 2.34
TM2D3-213ENST00000560910 CHMP7Q8WUX9 453 aaPredicted RBP29.68■■■□□ 2.34
TM2D3-213ENST00000560910 ARHGEF11O15085 1522 aa29.67■■■□□ 2.34
TM2D3-213ENST00000560910 SYNJ2O15056 1496 aa29.65■■■□□ 2.34
TM2D3-213ENST00000560910 PBRM1Q86U86 1689 aa29.65■■■□□ 2.34
TM2D3-213ENST00000560910 CLASP1Q7Z460 1538 aa29.55■■■□□ 2.32
TM2D3-213ENST00000560910 ADAMTS12P58397 1594 aa29.46■■■□□ 2.31
TM2D3-213ENST00000560910 ARAP1Q96P48 1450 aa29.43■■■□□ 2.3
TM2D3-213ENST00000560910 CYB5RLQ6IPT4 315 aa29.43■■■□□ 2.3
TM2D3-213ENST00000560910 GRIN2AQ12879 1464 aa29.42■■■□□ 2.3
TM2D3-213ENST00000560910 ERICH3Q5RHP9 1530 aa29.42■■■□□ 2.3
TM2D3-213ENST00000560910 FHAD1B1AJZ9 1412 aa29.41■■■□□ 2.3
TM2D3-213ENST00000560910 NUP160Q12769 1436 aa29.31■■■□□ 2.28
TM2D3-213ENST00000560910 CEP170Q5SW79 1584 aa29.29■■■□□ 2.28
TM2D3-213ENST00000560910 KIF27Q86VH2 1401 aa29.23■■■□□ 2.27
TM2D3-213ENST00000560910 IGF1RP08069 1367 aa29.17■■■□□ 2.26
TM2D3-213ENST00000560910 ERCC6L2Q5T890 1561 aa29.12■■■□□ 2.25
TM2D3-213ENST00000560910 SHROOM2Q13796 1616 aa29.09■■■□□ 2.25
TM2D3-213ENST00000560910 CUL7Q14999 1698 aa29.05■■■□□ 2.24
TM2D3-213ENST00000560910 RUSC2Q8N2Y8 1516 aa29.03■■■□□ 2.24
TM2D3-213ENST00000560910 JPH4Q96JJ6 628 aa29.01■■■□□ 2.23
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms