RNA–Protein interactions for RNA: ENST00000417512.1

SDCCAG3-205, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 2

Gene SDCCAG3, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-205ENST00000417512 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.61
SDCCAG3-205ENST00000417512 ABCC9O60706 1549 aa28.77■■■□□ 2.2
SDCCAG3-205ENST00000417512 CCDC180Q9P1Z9 1646 aa28.18■■■□□ 2.1
SDCCAG3-205ENST00000417512 DNAJC5BQ9UF47 199 aa27.4■■□□□ 1.98
SDCCAG3-205ENST00000417512 RB1CC1Q8TDY2 1594 aa27.14■■□□□ 1.93
SDCCAG3-205ENST00000417512 DCAF8L2P0C7V8 631 aa26.98■■□□□ 1.91
SDCCAG3-205ENST00000417512 NACADO15069 1562 aa26.85■■□□□ 1.89
SDCCAG3-205ENST00000417512 PABPN1Q86U42 306 aaKnown RBP eCLIP26.85■■□□□ 1.89
SDCCAG3-205ENST00000417512 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
SDCCAG3-205ENST00000417512 UNC13AQ9UPW8 1703 aa26.3■■□□□ 1.8
SDCCAG3-205ENST00000417512 BICRAQ9NZM4 1560 aa26.29■■□□□ 1.8
SDCCAG3-205ENST00000417512 CECR2Q9BXF3 1484 aa25.96■■□□□ 1.75
SDCCAG3-205ENST00000417512 SHROOM4Q9ULL8 1493 aa25.92■■□□□ 1.74
SDCCAG3-205ENST00000417512 ZCCHC6Q5VYS8 1495 aaKnown RBP25.87■■□□□ 1.73
SDCCAG3-205ENST00000417512 CC2D2AQ9P2K1 1620 aa25.87■■□□□ 1.73
SDCCAG3-205ENST00000417512 DCAF1Q9Y4B6 1507 aa25.85■■□□□ 1.73
SDCCAG3-205ENST00000417512 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
SDCCAG3-205ENST00000417512 EIF4G1Q04637 1599 aaKnown RBP25.72■■□□□ 1.71
SDCCAG3-205ENST00000417512 DNAJC5Q9H3Z4 198 aa25.48■■□□□ 1.67
SDCCAG3-205ENST00000417512 CUX2O14529 1486 aa24.9■■□□□ 1.58
SDCCAG3-205ENST00000417512 ERCC6Q03468 1493 aa24.9■■□□□ 1.58
SDCCAG3-205ENST00000417512 NCAPD3P42695 1498 aa24.86■■□□□ 1.57
SDCCAG3-205ENST00000417512 ATAD2BQ9ULI0 1458 aa24.71■■□□□ 1.55
SDCCAG3-205ENST00000417512 SMARCA2P51531 1590 aa24.59■■□□□ 1.53
SDCCAG3-205ENST00000417512 NESP48681 1621 aa24.57■■□□□ 1.52
SDCCAG3-205ENST00000417512 HMGXB3Q12766 1538 aa24.53■■□□□ 1.52
SDCCAG3-205ENST00000417512 SMARCA4P51532 1647 aa24.5■■□□□ 1.51
SDCCAG3-205ENST00000417512 BAZ1BQ9UIG0 1483 aaKnown RBP24.46■■□□□ 1.51
SDCCAG3-205ENST00000417512 BAZ1AQ9NRL2 1556 aaPredicted RBP24.38■■□□□ 1.49
SDCCAG3-205ENST00000417512 PDS5BQ9NTI5 1447 aa24.29■■□□□ 1.48
SDCCAG3-205ENST00000417512 LAMC3Q9Y6N6 1575 aa24.28■■□□□ 1.48
SDCCAG3-205ENST00000417512 TRIM41Q8WV44 630 aa24.27■■□□□ 1.48
SDCCAG3-205ENST00000417512 THOC2Q8NI27 1593 aaKnown RBP24.25■■□□□ 1.47
SDCCAG3-205ENST00000417512 PEG3Q9GZU2 1588 aa24.25■■□□□ 1.47
SDCCAG3-205ENST00000417512 MROH2BQ7Z745 1585 aa24.17■■□□□ 1.46
SDCCAG3-205ENST00000417512 CADPSQ9ULU8 1353 aa24.14■■□□□ 1.45
SDCCAG3-205ENST00000417512 KIF21AQ7Z4S6 1674 aa24.09■■□□□ 1.45
SDCCAG3-205ENST00000417512 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
SDCCAG3-205ENST00000417512 WDR62O43379 1518 aa23.9■■□□□ 1.42
SDCCAG3-205ENST00000417512 OSCARQ8IYS5 282 aa23.9■■□□□ 1.42
SDCCAG3-205ENST00000417512 CEP164Q9UPV0 1460 aa23.86■■□□□ 1.41
SDCCAG3-205ENST00000417512 WIZO95785 1651 aa23.82■■□□□ 1.4
SDCCAG3-205ENST00000417512 FANCD2Q9BXW9 1451 aa23.81■■□□□ 1.4
SDCCAG3-205ENST00000417512 CFTRP13569 1480 aa23.72■■□□□ 1.39
SDCCAG3-205ENST00000417512 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
SDCCAG3-205ENST00000417512 URB2Q14146 1524 aaKnown RBP23.59■■□□□ 1.37
SDCCAG3-205ENST00000417512 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
SDCCAG3-205ENST00000417512 IFT140Q96RY7 1462 aa23.41■■□□□ 1.34
SDCCAG3-205ENST00000417512 ZNF608Q9ULD9 1512 aaPredicted RBP23.39■■□□□ 1.34
SDCCAG3-205ENST00000417512 CYB5RLQ6IPT4 315 aa23.38■■□□□ 1.33
SDCCAG3-205ENST00000417512 RIMBP3CA6NJZ7 1639 aa23.37■■□□□ 1.33
SDCCAG3-205ENST00000417512 RIMBP3BA6NNM3 1639 aa23.37■■□□□ 1.33
SDCCAG3-205ENST00000417512 RIMBP3Q9UFD9 1639 aa23.37■■□□□ 1.33
SDCCAG3-205ENST00000417512 CCDC88BA6NC98 1476 aa23.33■■□□□ 1.33
SDCCAG3-205ENST00000417512 ARHGEF11O15085 1522 aa23.32■■□□□ 1.32
SDCCAG3-205ENST00000417512 TRHP20396 242 aaPredicted RBP23.29■■□□□ 1.32
SDCCAG3-205ENST00000417512 TOPBP1Q92547 1522 aa23.28■■□□□ 1.32
SDCCAG3-205ENST00000417512 FBLN2P98095 1184 aa23.28■■□□□ 1.32
SDCCAG3-205ENST00000417512 ABCC8Q09428 1581 aa23.26■■□□□ 1.31
SDCCAG3-205ENST00000417512 AQRO60306 1485 aaKnown RBP eCLIP23.2■■□□□ 1.31e-8■■■■□ 24.2
SDCCAG3-205ENST00000417512 PRDM2Q13029 1718 aa23.18■■□□□ 1.3
SDCCAG3-205ENST00000417512 EIF4G3O43432 1585 aaKnown RBP23.14■■□□□ 1.3
SDCCAG3-205ENST00000417512 DNMBPQ6XZF7 1577 aa23.12■■□□□ 1.29
SDCCAG3-205ENST00000417512 ARAP1Q96P48 1450 aa23.05■■□□□ 1.28
SDCCAG3-205ENST00000417512 TDRD9Q8NDG6 1382 aaKnown RBP23.04■■□□□ 1.28
SDCCAG3-205ENST00000417512 TARBP1Q13395 1621 aaKnown RBP23.03■■□□□ 1.28
SDCCAG3-205ENST00000417512 POLA1P09884 1462 aaPredicted RBP23.03■■□□□ 1.28
SDCCAG3-205ENST00000417512 SOGA1O94964 1423 aa23.02■■□□□ 1.28
SDCCAG3-205ENST00000417512 CHMP7Q8WUX9 453 aaPredicted RBP23.02■■□□□ 1.28
SDCCAG3-205ENST00000417512 CHD1O14646 1710 aa22.99■■□□□ 1.27
SDCCAG3-205ENST00000417512 RAD54L2Q9Y4B4 1467 aa22.99■■□□□ 1.27
SDCCAG3-205ENST00000417512 AEBP2Q6ZN18 517 aaPredicted RBP22.92■■□□□ 1.26
SDCCAG3-205ENST00000417512 SNAPC4Q5SXM2 1469 aa22.88■■□□□ 1.25
SDCCAG3-205ENST00000417512 FGD5Q6ZNL6 1462 aa22.84■■□□□ 1.25
SDCCAG3-205ENST00000417512 GRIN2BQ13224 1484 aa22.8■■□□□ 1.24
SDCCAG3-205ENST00000417512 MAGI1Q96QZ7 1491 aaPredicted RBP22.8■■□□□ 1.24
SDCCAG3-205ENST00000417512 SYNJ1O43426 1573 aa22.8■■□□□ 1.24
SDCCAG3-205ENST00000417512 CLASP1Q7Z460 1538 aa22.78■■□□□ 1.24
SDCCAG3-205ENST00000417512 WDR97A6NE52 1622 aa22.75■■□□□ 1.23
SDCCAG3-205ENST00000417512 SYNJ2O15056 1496 aa22.75■■□□□ 1.23
SDCCAG3-205ENST00000417512 CUX1P39880 1505 aa22.72■■□□□ 1.23
SDCCAG3-205ENST00000417512 GAPVD1Q14C86 1478 aa22.68■■□□□ 1.22
SDCCAG3-205ENST00000417512 ABCA10Q8WWZ4 1543 aa22.54■■□□□ 1.2
SDCCAG3-205ENST00000417512 PBRM1Q86U86 1689 aa22.49■■□□□ 1.19
SDCCAG3-205ENST00000417512 WRNQ14191 1432 aaPredicted RBP eCLIP22.48■■□□□ 1.19
SDCCAG3-205ENST00000417512 GRIN2AQ12879 1464 aa22.47■■□□□ 1.19
SDCCAG3-205ENST00000417512 SUPT5HO00267 1087 aaKnown RBP22.46■■□□□ 1.19
SDCCAG3-205ENST00000417512 ABCA5Q8WWZ7 1642 aa22.44■■□□□ 1.18
SDCCAG3-205ENST00000417512 ERCC6L2Q5T890 1561 aa22.43■■□□□ 1.18
SDCCAG3-205ENST00000417512 NUP160Q12769 1436 aa22.4■■□□□ 1.18
SDCCAG3-205ENST00000417512 FHAD1B1AJZ9 1412 aa22.39■■□□□ 1.17
SDCCAG3-205ENST00000417512 CEP170Q5SW79 1584 aa22.38■■□□□ 1.17
SDCCAG3-205ENST00000417512 JPH4Q96JJ6 628 aa22.35■■□□□ 1.17
SDCCAG3-205ENST00000417512 NPM1P06748 294 aaKnown RBP eCLIP22.34■■□□□ 1.17
SDCCAG3-205ENST00000417512 PRG4Q92954 1404 aaPredicted RBP22.31■■□□□ 1.16
SDCCAG3-205ENST00000417512 ADAMTS12P58397 1594 aa22.31■■□□□ 1.16
SDCCAG3-205ENST00000417512 FAM69CQ0P6D2 419 aa22.29■■□□□ 1.16
SDCCAG3-205ENST00000417512 SHROOM2Q13796 1616 aa22.24■■□□□ 1.15
SDCCAG3-205ENST00000417512 ERICH3Q5RHP9 1530 aa22.24■■□□□ 1.15
SDCCAG3-205ENST00000417512 TOP2BQ02880 1626 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 216.9 ms