RNA–Protein interactions for RNA: ENST00000376389.7

FLOT1-201, Transcript of flotillin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FLOT1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-201ENST00000376389 NISCHQ9Y2I1 1504 aa50.95■■■■■ 5.75
FLOT1-201ENST00000376389 CCDC180Q9P1Z9 1646 aa44.24■■■■■ 4.67
FLOT1-201ENST00000376389 ZCCHC6Q5VYS8 1495 aaKnown RBP42.79■■■■■ 4.44
FLOT1-201ENST00000376389 DCAF8L2P0C7V8 631 aa42.33■■■■■ 4.37
FLOT1-201ENST00000376389 ABCC9O60706 1549 aa42.01■■■■■ 4.32
FLOT1-201ENST00000376389 DCAF1Q9Y4B6 1507 aa41.97■■■■■ 4.31
FLOT1-201ENST00000376389 SHROOM4Q9ULL8 1493 aa41.93■■■■■ 4.3
FLOT1-201ENST00000376389 MYO15BQ96JP2 1530 aa41.4■■■■■ 4.22
FLOT1-201ENST00000376389 NACADO15069 1562 aa41.22■■■■■ 4.19
FLOT1-201ENST00000376389 SCRIBQ14160 1630 aa40.93■■■■■ 4.14
FLOT1-201ENST00000376389 RB1CC1Q8TDY2 1594 aa40.87■■■■■ 4.13
FLOT1-201ENST00000376389 SUPT5HO00267 1087 aaKnown RBP40.37■■■■■ 4.05
FLOT1-201ENST00000376389 UNC13AQ9UPW8 1703 aa40.14■■■■■ 4.02
FLOT1-201ENST00000376389 PABPN1Q86U42 306 aaKnown RBP eCLIP39.74■■■■□ 3.953e-6■■□□□ 12.9
FLOT1-201ENST00000376389 BICRAQ9NZM4 1560 aa39.73■■■■□ 3.95
FLOT1-201ENST00000376389 CECR2Q9BXF3 1484 aa39.7■■■■□ 3.95
FLOT1-201ENST00000376389 RSF1Q96T23 1441 aaPredicted RBP39.62■■■■□ 3.93
FLOT1-201ENST00000376389 MROH2BQ7Z745 1585 aa39.45■■■■□ 3.91
FLOT1-201ENST00000376389 BAZ1AQ9NRL2 1556 aaPredicted RBP39.28■■■■□ 3.88
FLOT1-201ENST00000376389 WIZO95785 1651 aa39.15■■■■□ 3.86
FLOT1-201ENST00000376389 SMARCA4P51532 1647 aa39.15■■■■□ 3.86
FLOT1-201ENST00000376389 TOP2AP11388 1531 aaKnown RBP38.62■■■■□ 3.77
FLOT1-201ENST00000376389 CHIC1Q5VXU3 224 aa38.61■■■■□ 3.77
FLOT1-201ENST00000376389 PEG3Q9GZU2 1588 aa38.56■■■■□ 3.76
FLOT1-201ENST00000376389 EIF4G1Q04637 1599 aaKnown RBP38.5■■■■□ 3.75
FLOT1-201ENST00000376389 ATAD2BQ9ULI0 1458 aa38.49■■■■□ 3.75
FLOT1-201ENST00000376389 SMARCA2P51531 1590 aa38.4■■■■□ 3.74
FLOT1-201ENST00000376389 CCDC88BA6NC98 1476 aa38.33■■■■□ 3.73
FLOT1-201ENST00000376389 BAZ1BQ9UIG0 1483 aaKnown RBP38.29■■■■□ 3.72
FLOT1-201ENST00000376389 NCAPD3P42695 1498 aa38.08■■■■□ 3.69
FLOT1-201ENST00000376389 HMGXB3Q12766 1538 aa38■■■■□ 3.67
FLOT1-201ENST00000376389 CC2D2AQ9P2K1 1620 aa37.94■■■■□ 3.66
FLOT1-201ENST00000376389 TRIM41Q8WV44 630 aa37.84■■■■□ 3.65
FLOT1-201ENST00000376389 ABCC8Q09428 1581 aa37.63■■■■□ 3.61
FLOT1-201ENST00000376389 FAM9AQ8IZU1 332 aaPredicted RBP37.32■■■■□ 3.56
FLOT1-201ENST00000376389 CFTRP13569 1480 aa37.29■■■■□ 3.56
FLOT1-201ENST00000376389 WRNQ14191 1432 aaPredicted RBP eCLIP37.28■■■■□ 3.56
FLOT1-201ENST00000376389 LOC105371045A0A1W2PR82 267 aa37.26■■■■□ 3.56
FLOT1-201ENST00000376389 DNAJC5BQ9UF47 199 aa37.18■■■■□ 3.54
FLOT1-201ENST00000376389 CADPSQ9ULU8 1353 aa37.17■■■■□ 3.54
FLOT1-201ENST00000376389 SYNJ1O43426 1573 aa37.15■■■■□ 3.54
FLOT1-201ENST00000376389 PRDM2Q13029 1718 aa37.03■■■■□ 3.52
FLOT1-201ENST00000376389 SOGA1O94964 1423 aa36.95■■■■□ 3.51
FLOT1-201ENST00000376389 NESP48681 1621 aa36.94■■■■□ 3.5
FLOT1-201ENST00000376389 TOP2BQ02880 1626 aa36.91■■■■□ 3.5
FLOT1-201ENST00000376389 EHMT2Q96KQ7 1210 aa36.91■■■■□ 3.5
FLOT1-201ENST00000376389 CUX1P39880 1505 aa36.86■■■■□ 3.49
FLOT1-201ENST00000376389 BIVM-ERCC5R4GMW8 1640 aa36.85■■■■□ 3.49
FLOT1-201ENST00000376389 RUSC2Q8N2Y8 1516 aa36.84■■■■□ 3.49
FLOT1-201ENST00000376389 FANCD2Q9BXW9 1451 aa36.79■■■■□ 3.48
FLOT1-201ENST00000376389 LAMC3Q9Y6N6 1575 aa36.75■■■■□ 3.47
FLOT1-201ENST00000376389 EEA1Q15075 1411 aa36.67■■■■□ 3.46
FLOT1-201ENST00000376389 CSRNP3Q8WYN3 585 aa36.63■■■■□ 3.45
FLOT1-201ENST00000376389 CEP164Q9UPV0 1460 aa36.51■■■■□ 3.44
FLOT1-201ENST00000376389 PDS5BQ9NTI5 1447 aa36.51■■■■□ 3.43
FLOT1-201ENST00000376389 FGD5Q6ZNL6 1462 aa36.44■■■■□ 3.42
FLOT1-201ENST00000376389 DNMBPQ6XZF7 1577 aa36.42■■■■□ 3.42
FLOT1-201ENST00000376389 KIF21AQ7Z4S6 1674 aa36.41■■■■□ 3.42
FLOT1-201ENST00000376389 TOPBP1Q92547 1522 aa36.39■■■■□ 3.42
FLOT1-201ENST00000376389 URB2Q14146 1524 aaKnown RBP36.34■■■■□ 3.41
FLOT1-201ENST00000376389 KIF27Q86VH2 1401 aa36.29■■■■□ 3.4
FLOT1-201ENST00000376389 GOLGA3Q08378 1498 aa36.27■■■■□ 3.4
FLOT1-201ENST00000376389 UBTFP17480 764 aaKnown RBP36.25■■■■□ 3.39
FLOT1-201ENST00000376389 KIF21BO75037 1637 aa36.24■■■■□ 3.39
FLOT1-201ENST00000376389 CUX2O14529 1486 aa36.24■■■■□ 3.39
FLOT1-201ENST00000376389 POLA1P09884 1462 aaPredicted RBP36.24■■■■□ 3.39
FLOT1-201ENST00000376389 RAD54L2Q9Y4B4 1467 aa36.21■■■■□ 3.39
FLOT1-201ENST00000376389 TNIKQ9UKE5 1360 aa36.18■■■■□ 3.38
FLOT1-201ENST00000376389 RAPGEF2Q9Y4G8 1499 aa36.16■■■■□ 3.38
FLOT1-201ENST00000376389 PRXQ9BXM0 1461 aa36.08■■■■□ 3.37
FLOT1-201ENST00000376389 CEP162Q5TB80 1403 aa36.05■■■■□ 3.36
FLOT1-201ENST00000376389 MRC2Q9UBG0 1479 aa36.05■■■■□ 3.36
FLOT1-201ENST00000376389 ABCA10Q8WWZ4 1543 aa36.04■■■■□ 3.36
FLOT1-201ENST00000376389 IGF1RP08069 1367 aa36.01■■■■□ 3.36
FLOT1-201ENST00000376389 ERICH3Q5RHP9 1530 aa35.96■■■■□ 3.35
FLOT1-201ENST00000376389 ERCC6Q03468 1493 aa35.95■■■■□ 3.35
FLOT1-201ENST00000376389 WDR97A6NE52 1622 aa35.91■■■■□ 3.34
FLOT1-201ENST00000376389 TDRD9Q8NDG6 1382 aaKnown RBP35.86■■■■□ 3.33
FLOT1-201ENST00000376389 CARMIL1Q5VZK9 1371 aa35.83■■■■□ 3.33
FLOT1-201ENST00000376389 WDR62O43379 1518 aa35.83■■■■□ 3.33
FLOT1-201ENST00000376389 TARBP1Q13395 1621 aaKnown RBP35.82■■■■□ 3.32
FLOT1-201ENST00000376389 RANGAP1P46060 587 aaPredicted RBP35.8■■■■□ 3.32
FLOT1-201ENST00000376389 CLIP1P30622 1438 aa35.75■■■■□ 3.31
FLOT1-201ENST00000376389 ABCA5Q8WWZ7 1642 aa35.74■■■■□ 3.31
FLOT1-201ENST00000376389 THOC2Q8NI27 1593 aaKnown RBP35.72■■■■□ 3.31
FLOT1-201ENST00000376389 GAPVD1Q14C86 1478 aa35.72■■■■□ 3.31
FLOT1-201ENST00000376389 PCGF6Q9BYE7 350 aa35.63■■■■□ 3.29
FLOT1-201ENST00000376389 CUL7Q14999 1698 aa35.61■■■■□ 3.29
FLOT1-201ENST00000376389 PPARGC1BQ86YN6 1023 aaKnown RBP35.61■■■■□ 3.29
FLOT1-201ENST00000376389 AQRO60306 1485 aaKnown RBP eCLIP35.6■■■■□ 3.292e-7■■■■■ 35.5
FLOT1-201ENST00000376389 IFT140Q96RY7 1462 aa35.6■■■■□ 3.29
FLOT1-201ENST00000376389 ZNF608Q9ULD9 1512 aaPredicted RBP35.54■■■■□ 3.28
FLOT1-201ENST00000376389 PBRM1Q86U86 1689 aa35.48■■■■□ 3.27
FLOT1-201ENST00000376389 TRIM26Q12899 539 aaPredicted RBP35.47■■■■□ 3.27
FLOT1-201ENST00000376389 VPS8Q8N3P4 1428 aa35.4■■■■□ 3.26
FLOT1-201ENST00000376389 ARAP1Q96P48 1450 aa35.39■■■■□ 3.26
FLOT1-201ENST00000376389 GRIN2BQ13224 1484 aa35.38■■■■□ 3.25
FLOT1-201ENST00000376389 ARHGAP35Q9NRY4 1499 aa35.35■■■■□ 3.25
FLOT1-201ENST00000376389 EIF4G3O43432 1585 aaKnown RBP35.33■■■■□ 3.25
FLOT1-201ENST00000376389 TTBK1Q5TCY1 1321 aaPredicted RBP35.31■■■■□ 3.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms