Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.334e-6■■■□□ 17.3
SRSF1Q07955 CD46-209ENST00000367047 3089 ntTSL 5 BASIC6.74□□□□□ -1.334e-6■■■□□ 17.3
SRSF1Q07955 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.44e-6■■■□□ 17.3
SRSF1Q07955 CD46-205ENST00000358170 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.414e-6■■■□□ 17.3
SRSF1Q07955 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.414e-6■■■□□ 17.3
SRSF1Q07955 CD46-201ENST00000322875 3278 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.414e-6■■■□□ 17.3
SRSF1Q07955 CD46-207ENST00000367041 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.414e-6■■■□□ 17.3
SRSF1Q07955 CD46-204ENST00000357714 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.454e-6■■■□□ 17.3
SRSF1Q07955 CD46-212ENST00000469535 7826 ntTSL 1 (best)5.78□□□□□ -1.484e-6■■■□□ 17.3
SRSF1Q07955 PNCK-219ENST00000463548 783 ntTSL 517.98■□□□□ 0.472e-7■■■□□ 17.3
SRSF1Q07955 PNCK-207ENST00000419804 561 ntTSL 417.98■□□□□ 0.472e-7■■■□□ 17.3
SRSF1Q07955 SAFB2-208ENST00000591120 1298 ntTSL 213.36□□□□□ -0.276e-10■■■□□ 17.3
SRSF1Q07955 SAFB2-206ENST00000590262 564 ntTSL 47.85□□□□□ -1.156e-10■■■□□ 17.3
SRSF1Q07955 NCL-206ENST00000454824 606 ntTSL 36.23□□□□□ -1.418e-31■■■□□ 17.3
SRSF1Q07955 NCL-203ENST00000417652 568 ntTSL 46.23□□□□□ -1.418e-31■■■□□ 17.3
SRSF1Q07955 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC15.99■□□□□ 0.153e-10■■■□□ 17.2
SRSF1Q07955 UQCC1-217ENST00000482440 306 ntTSL 315.34■□□□□ 0.053e-10■■■□□ 17.2
SRSF1Q07955 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.62□□□□□ -0.073e-10■■■□□ 17.2
SRSF1Q07955 HCG18-241ENST00000602290 821 ntTSL 2 BASIC13.16□□□□□ -0.33e-10■■■□□ 17.2
SRSF1Q07955 ENO2-208ENST00000537838 541 ntTSL 412.67□□□□□ -0.381e-6■■■□□ 17.2
SRSF1Q07955 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC12.5□□□□□ -0.413e-10■■■□□ 17.2
SRSF1Q07955 ENO2-206ENST00000536199 823 ntTSL 512.44□□□□□ -0.421e-6■■■□□ 17.2
SRSF1Q07955 UQCC1-221ENST00000496812 801 ntTSL 310.06□□□□□ -0.83e-10■■■□□ 17.2
SRSF1Q07955 UQCC1-215ENST00000472559 1921 ntTSL 1 (best)9.95□□□□□ -0.823e-10■■■□□ 17.2
SRSF1Q07955 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC9.69□□□□□ -0.863e-10■■■□□ 17.2
SRSF1Q07955 HCG18-247ENST00000602698 573 ntTSL 3 BASIC9.22□□□□□ -0.933e-10■■■□□ 17.2
SRSF1Q07955 HCG18-234ENST00000413358 916 ntTSL 3 BASIC8.26□□□□□ -1.093e-10■■■□□ 17.2
SRSF1Q07955 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC7.83□□□□□ -1.163e-10■■■□□ 17.2
SRSF1Q07955 HCG18-248ENST00000602861 372 ntTSL 36.98□□□□□ -1.293e-10■■■□□ 17.2
SRSF1Q07955 HCG18-238ENST00000449544 4262 ntTSL 2 BASIC6.97□□□□□ -1.293e-10■■■□□ 17.2
SRSF1Q07955 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC5.37□□□□□ -1.553e-10■■■□□ 17.2
SRSF1Q07955 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.15□□□□□ -1.583e-10■■■□□ 17.2
SRSF1Q07955 P4HB-216ENST00000571617 505 ntTSL 319.84■□□□□ 0.777e-15■■■□□ 17.2
SRSF1Q07955 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.51■□□□□ 0.557e-15■■■□□ 17.2
SRSF1Q07955 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC16.89■□□□□ 0.297e-15■■■□□ 17.2
SRSF1Q07955 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.117e-15■■■□□ 17.2
SRSF1Q07955 P4HB-202ENST00000415593 1669 ntTSL 1 (best)13.65□□□□□ -0.227e-15■■■□□ 17.2
SRSF1Q07955 P4HB-220ENST00000575069 2453 ntTSL 212.33□□□□□ -0.447e-15■■■□□ 17.2
SRSF1Q07955 P4HB-209ENST00000474712 390 ntTSL 212.11□□□□□ -0.477e-15■■■□□ 17.2
SRSF1Q07955 P4HB-210ENST00000476482 765 ntTSL 1 (best)11.27□□□□□ -0.617e-15■■■□□ 17.2
SRSF1Q07955 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC5.84□□□□□ -1.474e-7■■■□□ 17.2
SRSF1Q07955 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.83e-6■■■□□ 17.2
SRSF1Q07955 EXOC3-202ENST00000503889 5365 ntTSL 514.2□□□□□ -0.143e-6■■■□□ 17.2
SRSF1Q07955 EXOC3-210ENST00000515601 5748 ntTSL 513.17□□□□□ -0.33e-6■■■□□ 17.2
SRSF1Q07955 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.713e-6■■■□□ 17.2
SRSF1Q07955 ARFRP1-205ENST00000610414 1251 ntTSL 216.51■□□□□ 0.233e-10■■■□□ 17.2
SRSF1Q07955 ARFRP1-209ENST00000612772 1375 ntTSL 316.11■□□□□ 0.173e-10■■■□□ 17.2
SRSF1Q07955 ARFRP1-206ENST00000610774 5178 ntTSL 212.39□□□□□ -0.433e-10■■■□□ 17.2
SRSF1Q07955 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.572e-6■■■□□ 17.2
SRSF1Q07955 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC10.58□□□□□ -0.722e-6■■■□□ 17.2
SRSF1Q07955 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC5.97□□□□□ -1.452e-6■■■□□ 17.2
SRSF1Q07955 ACTB-211ENST00000480301 657 ntTSL 1 (best)19.4■□□□□ 0.74e-11■■■□□ 17.2
SRSF1Q07955 ACTB-202ENST00000414620 561 ntTSL 414.95□□□□□ -0.024e-11■■■□□ 17.2
SRSF1Q07955 ACTB-206ENST00000443528 569 ntTSL 414.5□□□□□ -0.094e-11■■■□□ 17.2
SRSF1Q07955 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.24□□□□□ -0.455e-7■■■□□ 17.2
SRSF1Q07955 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.475e-7■■■□□ 17.2
SRSF1Q07955 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC10.95□□□□□ -0.665e-7■■■□□ 17.2
SRSF1Q07955 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.685e-7■■■□□ 17.2
SRSF1Q07955 ARHGEF1-203ENST00000354532 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.795e-7■■■□□ 17.2
SRSF1Q07955 ARHGEF1-220ENST00000600274 3439 ntTSL 1 (best)8.7□□□□□ -1.025e-7■■■□□ 17.2
SRSF1Q07955 PHIP-201ENST00000275034 10460 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.214e-7■■■□□ 17.2
SRSF1Q07955 RICTOR-206ENST00000510711 3126 ntTSL 27.36□□□□□ -1.232e-6■■■□□ 17.2
SRSF1Q07955 RICTOR-209ENST00000514735 686 ntTSL 35.87□□□□□ -1.472e-6■■■□□ 17.2
SRSF1Q07955 RICTOR-208ENST00000513566 1762 ntTSL 1 (best)5.84□□□□□ -1.472e-6■■■□□ 17.2
SRSF1Q07955 RICTOR-207ENST00000511516 7312 ntTSL 1 (best)2.69□□□□□ -1.982e-6■■■□□ 17.2
SRSF1Q07955 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.45□□□□□ -2.022e-6■■■□□ 17.2
SRSF1Q07955 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.092e-6■■■□□ 17.2
SRSF1Q07955 EHMT2-207ENST00000463484 547 ntTSL 49.88□□□□□ -0.832e-7■■■□□ 17.2
SRSF1Q07955 MSH5-SAPCD1-208ENST00000498473 2216 ntAPPRIS ALT2 TSL 1 (best)12.77□□□□□ -0.366e-9■■■□□ 17.1
SRSF1Q07955 NBEAL2-204ENST00000443829 3508 ntTSL 1 (best)10.62□□□□□ -0.715e-6■■■□□ 17.1
SRSF1Q07955 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC2.71□□□□□ -1.981e-14■■■□□ 17.1
SRSF1Q07955 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.322e-6■■■□□ 17.1
SRSF1Q07955 CCDC142-206ENST00000473278 810 ntTSL 211.98□□□□□ -0.492e-6■■■□□ 17.1
SRSF1Q07955 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.742e-6■■■□□ 17.1
SRSF1Q07955 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC11.98□□□□□ -0.491e-6■■■□□ 17.1
SRSF1Q07955 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC9.35□□□□□ -0.911e-6■■■□□ 17.1
SRSF1Q07955 MALAT1-204ENST00000610481 353 ntTSL 3 BASIC10.26□□□□□ -0.771e-323■■■□□ 17.1
SRSF1Q07955 GSE1-210ENST00000495192 618 ntTSL 212.36□□□□□ -0.432e-7■■■□□ 17.1
SRSF1Q07955 CALD1-212ENST00000454108 558 ntTSL 515.43■□□□□ 0.062e-7■■■□□ 17.1
SRSF1Q07955 CALD1-208ENST00000435928 458 ntTSL 515.43■□□□□ 0.062e-7■■■□□ 17.1
SRSF1Q07955 MAD1L1-211ENST00000445959 831 ntTSL 317.7■□□□□ 0.423e-7■■■□□ 17.1
SRSF1Q07955 AC005726.2-202ENST00000531839 1033 ntAPPRIS P5 TSL 29.9□□□□□ -0.822e-6■■■□□ 17.1
SRSF1Q07955 SPAG5-207ENST00000580083 978 ntTSL 37.05□□□□□ -1.282e-6■■■□□ 17.1
SRSF1Q07955 TFR2-207ENST00000473374 891 ntTSL 521.63■■□□□ 1.052e-7■■■□□ 17
SRSF1Q07955 TFR2-212ENST00000476304 2421 ntTSL 513.56□□□□□ -0.242e-7■■■□□ 17
SRSF1Q07955 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC12.59□□□□□ -0.392e-7■■■□□ 17
SRSF1Q07955 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.622e-7■■■□□ 17
SRSF1Q07955 TFR2-206ENST00000465294 2763 ntTSL 210.71□□□□□ -0.692e-7■■■□□ 17
SRSF1Q07955 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.722e-7■■■□□ 17
SRSF1Q07955 DDX55-207ENST00000540763 799 ntTSL 317.67■□□□□ 0.429e-9■■■□□ 17
SRSF1Q07955 DDX55-204ENST00000536079 765 ntTSL 216.38■□□□□ 0.219e-9■■■□□ 17
SRSF1Q07955 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.076e-10■■■□□ 17
SRSF1Q07955 POLR1B-207ENST00000430769 572 ntTSL 417.57■□□□□ 0.46e-9■■■□□ 17
SRSF1Q07955 POLR1B-206ENST00000430293 595 ntTSL 412.21□□□□□ -0.456e-9■■■□□ 17
SRSF1Q07955 POLR1B-208ENST00000438748 555 ntTSL 411.06□□□□□ -0.646e-9■■■□□ 17
SRSF1Q07955 POLR1B-209ENST00000448770 2494 ntTSL 1 (best)10.34□□□□□ -0.756e-9■■■□□ 17
SRSF1Q07955 POLR1B-205ENST00000424062 558 ntTSL 410.3□□□□□ -0.766e-9■■■□□ 17
SRSF1Q07955 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC10.03□□□□□ -0.86e-9■■■□□ 17
SRSF1Q07955 POLR1B-216ENST00000537335 4961 ntTSL 2 BASIC9.99□□□□□ -0.816e-9■■■□□ 17
SRSF1Q07955 POLR1B-202ENST00000333990 4376 ntTSL 1 (best)8.88□□□□□ -0.996e-9■■■□□ 17
Retrieved 100 of 14,836 protein–RNA pairs in 81.6 ms