RNA–Protein interactions for RNA: ENST00000602698.5

HCG18-247, Transcript of HLA complex group 18, humanhuman

TSL 3 BASIC

Gene HCG18, Length 573 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-247ENST00000602698 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
HCG18-247ENST00000602698 CCDC180Q9P1Z9 1646 aa21.55■■□□□ 1.04
HCG18-247ENST00000602698 ABCC9O60706 1549 aa21.31■■□□□ 1
HCG18-247ENST00000602698 RB1CC1Q8TDY2 1594 aa20.39■□□□□ 0.85
HCG18-247ENST00000602698 NACADO15069 1562 aa20.28■□□□□ 0.84
HCG18-247ENST00000602698 DCAF8L2P0C7V8 631 aa20.05■□□□□ 0.8
HCG18-247ENST00000602698 UNC13AQ9UPW8 1703 aa20.05■□□□□ 0.8
HCG18-247ENST00000602698 MYO15BQ96JP2 1530 aa20.04■□□□□ 0.8
HCG18-247ENST00000602698 ZCCHC6Q5VYS8 1495 aaKnown RBP19.92■□□□□ 0.78
HCG18-247ENST00000602698 DCAF1Q9Y4B6 1507 aa19.83■□□□□ 0.77
HCG18-247ENST00000602698 DNAJC5BQ9UF47 199 aa19.82■□□□□ 0.76
HCG18-247ENST00000602698 BICRAQ9NZM4 1560 aa19.81■□□□□ 0.76
HCG18-247ENST00000602698 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
HCG18-247ENST00000602698 SCRIBQ14160 1630 aa19.59■□□□□ 0.73
HCG18-247ENST00000602698 SHROOM4Q9ULL8 1493 aa19.55■□□□□ 0.72
HCG18-247ENST00000602698 CC2D2AQ9P2K1 1620 aa19.32■□□□□ 0.68
HCG18-247ENST00000602698 EIF4G1Q04637 1599 aaKnown RBP19.3■□□□□ 0.68
HCG18-247ENST00000602698 CECR2Q9BXF3 1484 aa19.19■□□□□ 0.66
HCG18-247ENST00000602698 SMARCA4P51532 1647 aa18.71■□□□□ 0.59
HCG18-247ENST00000602698 NCAPD3P42695 1498 aa18.67■□□□□ 0.58
HCG18-247ENST00000602698 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
HCG18-247ENST00000602698 SMARCA2P51531 1590 aa18.64■□□□□ 0.57
HCG18-247ENST00000602698 BAZ1AQ9NRL2 1556 aaPredicted RBP18.61■□□□□ 0.57
HCG18-247ENST00000602698 HMGXB3Q12766 1538 aa18.61■□□□□ 0.57
HCG18-247ENST00000602698 PEG3Q9GZU2 1588 aa18.54■□□□□ 0.56
HCG18-247ENST00000602698 AEBP2Q6ZN18 517 aaPredicted RBP18.49■□□□□ 0.55
HCG18-247ENST00000602698 BAZ1BQ9UIG0 1483 aaKnown RBP18.48■□□□□ 0.55
HCG18-247ENST00000602698 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
HCG18-247ENST00000602698 ERCC6Q03468 1493 aa18.39■□□□□ 0.54
HCG18-247ENST00000602698 NESP48681 1621 aa18.35■□□□□ 0.53
HCG18-247ENST00000602698 CUX2O14529 1486 aa18.34■□□□□ 0.53
HCG18-247ENST00000602698 WIZO95785 1651 aa18.29■□□□□ 0.52
HCG18-247ENST00000602698 LAMC3Q9Y6N6 1575 aa18.29■□□□□ 0.52
HCG18-247ENST00000602698 THOC2Q8NI27 1593 aaKnown RBP18.22■□□□□ 0.51
HCG18-247ENST00000602698 KIF21AQ7Z4S6 1674 aa18.22■□□□□ 0.51
HCG18-247ENST00000602698 DNAJC5Q9H3Z4 198 aa18.12■□□□□ 0.49
HCG18-247ENST00000602698 PDS5BQ9NTI5 1447 aa18.12■□□□□ 0.49
HCG18-247ENST00000602698 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
HCG18-247ENST00000602698 CADPSQ9ULU8 1353 aa18.09■□□□□ 0.49
HCG18-247ENST00000602698 TOP2AP11388 1531 aaKnown RBP18.06■□□□□ 0.48
HCG18-247ENST00000602698 MRC2Q9UBG0 1479 aa17.98■□□□□ 0.47
HCG18-247ENST00000602698 WDR62O43379 1518 aa17.97■□□□□ 0.47
HCG18-247ENST00000602698 CFTRP13569 1480 aa17.95■□□□□ 0.46
HCG18-247ENST00000602698 PRDM2Q13029 1718 aa17.94■□□□□ 0.46
HCG18-247ENST00000602698 CEP164Q9UPV0 1460 aa17.94■□□□□ 0.46
HCG18-247ENST00000602698 FANCD2Q9BXW9 1451 aa17.92■□□□□ 0.46
HCG18-247ENST00000602698 CCDC88BA6NC98 1476 aa17.81■□□□□ 0.44
HCG18-247ENST00000602698 URB2Q14146 1524 aaKnown RBP17.77■□□□□ 0.44
HCG18-247ENST00000602698 TOPBP1Q92547 1522 aa17.61■□□□□ 0.41
HCG18-247ENST00000602698 DNMBPQ6XZF7 1577 aa17.58■□□□□ 0.41
HCG18-247ENST00000602698 ABCC8Q09428 1581 aa17.57■□□□□ 0.4
HCG18-247ENST00000602698 IFT140Q96RY7 1462 aa17.56■□□□□ 0.4
HCG18-247ENST00000602698 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.4
HCG18-247ENST00000602698 EIF4G3O43432 1585 aaKnown RBP17.5■□□□□ 0.39
HCG18-247ENST00000602698 TARBP1Q13395 1621 aaKnown RBP17.48■□□□□ 0.39
HCG18-247ENST00000602698 OSCARQ8IYS5 282 aa17.44■□□□□ 0.38
HCG18-247ENST00000602698 POLA1P09884 1462 aaPredicted RBP17.44■□□□□ 0.38
HCG18-247ENST00000602698 CHD1O14646 1710 aa17.38■□□□□ 0.37
HCG18-247ENST00000602698 TRIM41Q8WV44 630 aa17.36■□□□□ 0.37
HCG18-247ENST00000602698 CUX1P39880 1505 aa17.36■□□□□ 0.37
HCG18-247ENST00000602698 AQRO60306 1485 aaKnown RBP eCLIP17.35■□□□□ 0.37
HCG18-247ENST00000602698 CHIC1Q5VXU3 224 aa17.34■□□□□ 0.37
HCG18-247ENST00000602698 FGD5Q6ZNL6 1462 aa17.34■□□□□ 0.37
HCG18-247ENST00000602698 RAD54L2Q9Y4B4 1467 aa17.34■□□□□ 0.37
HCG18-247ENST00000602698 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
HCG18-247ENST00000602698 RIMBP3CA6NJZ7 1639 aa17.32■□□□□ 0.36
HCG18-247ENST00000602698 RIMBP3BA6NNM3 1639 aa17.32■□□□□ 0.36
HCG18-247ENST00000602698 RIMBP3Q9UFD9 1639 aa17.32■□□□□ 0.36
HCG18-247ENST00000602698 SUPT5HO00267 1087 aaKnown RBP17.32■□□□□ 0.36
HCG18-247ENST00000602698 SOGA1O94964 1423 aa17.31■□□□□ 0.36
HCG18-247ENST00000602698 ARHGEF11O15085 1522 aa17.25■□□□□ 0.35
HCG18-247ENST00000602698 TDRD9Q8NDG6 1382 aaKnown RBP17.25■□□□□ 0.35
HCG18-247ENST00000602698 PBRM1Q86U86 1689 aa17.23■□□□□ 0.35
HCG18-247ENST00000602698 SNAPC4Q5SXM2 1469 aa17.22■□□□□ 0.35
HCG18-247ENST00000602698 MAGI1Q96QZ7 1491 aaPredicted RBP17.18■□□□□ 0.34
HCG18-247ENST00000602698 GRIN2BQ13224 1484 aa17.18■□□□□ 0.34
HCG18-247ENST00000602698 ABCA5Q8WWZ7 1642 aa17.17■□□□□ 0.34
HCG18-247ENST00000602698 BIVM-ERCC5R4GMW8 1640 aa17.17■□□□□ 0.34
HCG18-247ENST00000602698 FBLN2P98095 1184 aa17.16■□□□□ 0.34
HCG18-247ENST00000602698 ABCA10Q8WWZ4 1543 aa17.16■□□□□ 0.34
HCG18-247ENST00000602698 TOP2BQ02880 1626 aa17.14■□□□□ 0.33
HCG18-247ENST00000602698 GAPVD1Q14C86 1478 aa17.13■□□□□ 0.33
HCG18-247ENST00000602698 CLASP1Q7Z460 1538 aa17.13■□□□□ 0.33
HCG18-247ENST00000602698 SYNJ1O43426 1573 aa17.13■□□□□ 0.33
HCG18-247ENST00000602698 SYNJ2O15056 1496 aa17.12■□□□□ 0.33
HCG18-247ENST00000602698 ARAP1Q96P48 1450 aa17.08■□□□□ 0.32
HCG18-247ENST00000602698 WRNQ14191 1432 aaPredicted RBP eCLIP17.08■□□□□ 0.32
HCG18-247ENST00000602698 CHMP7Q8WUX9 453 aaPredicted RBP17.07■□□□□ 0.32
HCG18-247ENST00000602698 ADAMTS12P58397 1594 aa17.02■□□□□ 0.32
HCG18-247ENST00000602698 CYB5RLQ6IPT4 315 aa17.02■□□□□ 0.32
HCG18-247ENST00000602698 GRIN2AQ12879 1464 aa16.97■□□□□ 0.31
HCG18-247ENST00000602698 ERICH3Q5RHP9 1530 aa16.96■□□□□ 0.3
HCG18-247ENST00000602698 CEP170Q5SW79 1584 aa16.93■□□□□ 0.3
HCG18-247ENST00000602698 FHAD1B1AJZ9 1412 aa16.91■□□□□ 0.3
HCG18-247ENST00000602698 NUP160Q12769 1436 aa16.9■□□□□ 0.3
HCG18-247ENST00000602698 SHROOM2Q13796 1616 aa16.88■□□□□ 0.29
HCG18-247ENST00000602698 ERCC6L2Q5T890 1561 aa16.85■□□□□ 0.29
HCG18-247ENST00000602698 RUSC2Q8N2Y8 1516 aa16.79■□□□□ 0.28
HCG18-247ENST00000602698 TRHP20396 242 aaPredicted RBP16.78■□□□□ 0.28
HCG18-247ENST00000602698 CUL7Q14999 1698 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms